PITA_200 megaCluster: 7 Residual: 0.16

Title Cluster Residual Bicluster Conditions Residual Permutation P-Value Var. Exp. First PC Var. Exp. First PC Perm. P-Value
PITA_200 7 0.16 15 0 0.951196 0
Displaying 1 - 28 of 28
100855 TBC1 domain family, member 14

Details for - - TBC1 domain family, member 14

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100855

Tuberculist Genomic Region

14339 thymoma viral proto-oncogene 1 interacting protein

Details for - - thymoma viral proto-oncogene 1 interacting protein

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14339

Tuberculist Genomic Region

225326 phosphoinositide-3-kinase, class 3

Details for - - phosphoinositide-3-kinase, class 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 225326

Tuberculist Genomic Region

229211 acyl-Coenzyme A dehydrogenase family, member 9

Details for - - acyl-Coenzyme A dehydrogenase family, member 9

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 229211

Tuberculist Genomic Region

70207 translational activator of mitochondrially encoded cytochrome c oxidase I

Details for RP23-81G14.4 - translational activator of mitochondrially encoded cytochrome c oxidase I

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 70207

Tuberculist Genomic Region

74626 transmembrane protein 81

Details for - - transmembrane protein 81

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 74626

Tuberculist Genomic Region

100504663 autophagy related 14

Details for mCG_6911 - autophagy related 14

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100504663

Tuberculist Genomic Region

104112 ATP citrate lyase

Details for RP23-392I3.9 - ATP citrate lyase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 104112

Tuberculist Genomic Region

104479 coiled-coil domain containing 117

Details for RP23-288K19.5 - coiled-coil domain containing 117

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 104479

Tuberculist Genomic Region

11409 acyl-Coenzyme A dehydrogenase, short chain

Details for - - acyl-Coenzyme A dehydrogenase, short chain

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 11409

Tuberculist Genomic Region

11766 adaptor protein complex AP-1, gamma 2 subunit

Details for - - adaptor protein complex AP-1, gamma 2 subunit

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 11766

Tuberculist Genomic Region

12039 branched chain ketoacid dehydrogenase E1, alpha polypeptide

Details for - - branched chain ketoacid dehydrogenase E1, alpha polypeptide

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12039

Tuberculist Genomic Region

15356 3-hydroxy-3-methylglutaryl-Coenzyme A lyase

Details for RP23-161N17.7 - 3-hydroxy-3-methylglutaryl-Coenzyme A lyase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15356

Tuberculist Genomic Region

18597 pyruvate dehydrogenase E1 alpha 1

Details for RP23-36P16.4 - pyruvate dehydrogenase E1 alpha 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 18597

Tuberculist Genomic Region

19286 6-pyruvoyl-tetrahydropterin synthase

Details for - - 6-pyruvoyl-tetrahydropterin synthase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 19286

Tuberculist Genomic Region

233056 zinc finger protein 790

Details for - - zinc finger protein 790

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 233056

Tuberculist Genomic Region

330050 family with sequence similarity 185, member A

Details for - - family with sequence similarity 185, member A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 330050

Tuberculist Genomic Region

56453 membrane-bound transcription factor peptidase, site 1

Details for - - membrane-bound transcription factor peptidase, site 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 56453

Tuberculist Genomic Region

58193 exostoses (multiple)-like 2

Details for - - exostoses (multiple)-like 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 58193

Tuberculist Genomic Region

66335 ATPase, H+ transporting, lysosomal V1 subunit C1

Details for - - ATPase, H+ transporting, lysosomal V1 subunit C1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66335

Tuberculist Genomic Region

66905 perilipin 3

Details for - - perilipin 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66905

Tuberculist Genomic Region

67143 IKAROS family zinc finger 5

Details for - - IKAROS family zinc finger 5

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67143

Tuberculist Genomic Region

67452 patatin-like phospholipase domain containing 8

Details for - - patatin-like phospholipase domain containing 8

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67452

Tuberculist Genomic Region

67510 trans-golgi network vesicle protein 23B

Details for RP23-428I5.3 - trans-golgi network vesicle protein 23B

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67510

Tuberculist Genomic Region

67727 syntaxin 17

Details for RP23-122N18.3 - syntaxin 17

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67727

Tuberculist Genomic Region

68839 ankyrin repeat domain 46

Details for - - ankyrin repeat domain 46

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68839

Tuberculist Genomic Region

72354 tetratricopeptide repeat domain 4

Details for RP23-97O7.5 - tetratricopeptide repeat domain 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 72354

Tuberculist Genomic Region

78255 Ral GEF with PH domain and SH3 binding motif 2

Details for - - Ral GEF with PH domain and SH3 binding motif 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 78255

Tuberculist Genomic Region

TFs percTargets pValue
TFAP2B_TFAP_DBD_dimeric_11_1 0.642857 0.00000139
Displaying 1 - 1 of 1
GO Terms
NA
Motif1 E-Value Motif1 Consensus Motif1 Matches Motif2 E-Value Motif2 Consensus Motif2 Matches
0.00018 TTTTTTTNTWAT NA 1.5 TTTMTGYNTTCT NA
Motif1 Score Motif1 Consensus Motif1 Matches Motif2 Score Motif2 Consensus Motif2 Matches
1.08 TCGCGT NA 1.17 CCGAACCG NA
Motif1 E-Value Motif1 Consensus Motif1 Matches Motif1 Model Motif2 E-Value Motif2 Consensus Motif2 Matches Motif2 Model
0.65 TGTNGG NA NA 0.69 CTATYNTA NA NA

3p UTR PITA

miRNAs percTargets pValue
mmu-miR-760 0.791667 0.0000605
miRNAs percTargets pValue
mmu-miR-495 0.25 0.0000208
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