PITA_5 megaCluster: 7 Residual: 0.21

Title Cluster Residual Bicluster Conditions Residual Permutation P-Value Var. Exp. First PC Var. Exp. First PC Perm. P-Value
PITA_5 7 0.21 15 0 0.92391 0
Displaying 1 - 50 of 50
100042332 RIKEN cDNA 2810410L24 gene

Details for - - RIKEN cDNA 2810410L24 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100042332

Tuberculist Genomic Region

101240 WD repeat domain 91

Details for - - WD repeat domain 91

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 101240

Tuberculist Genomic Region

109079 selenophosphate synthetase 1

Details for RP23-198G1.3 - selenophosphate synthetase 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 109079

Tuberculist Genomic Region

12371 caspase 9

Details for RP23-395H4.3 - caspase 9

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12371

Tuberculist Genomic Region

12892 coproporphyrinogen oxidase

Details for - - coproporphyrinogen oxidase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12892

Tuberculist Genomic Region

16569 kinesin family member 3B

Details for RP23-192G18.6 - kinesin family member 3B

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 16569

Tuberculist Genomic Region

170749 myotubularin related protein 4

Details for RP23-168C20.3 - myotubularin related protein 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 170749

Tuberculist Genomic Region

17283 multiple endocrine neoplasia 1

Details for - - multiple endocrine neoplasia 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17283

Tuberculist Genomic Region

18642 phosphofructokinase, muscle

Details for - - phosphofructokinase, muscle

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 18642

Tuberculist Genomic Region

210035 transmembrane protein 194

Details for - - transmembrane protein 194

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 210035

Tuberculist Genomic Region

216724 RUN and FYVE domain containing 1

Details for RP23-121P11.2 - RUN and FYVE domain containing 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 216724

Tuberculist Genomic Region

217695 zinc finger, FYVE domain containing 1

Details for - - zinc finger, FYVE domain containing 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 217695

Tuberculist Genomic Region

22057 transducer of ErbB-2.1

Details for RP23-244C22.1 - transducer of ErbB-2.1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 22057

Tuberculist Genomic Region

22192 ubiquitin-conjugating enzyme E2M

Details for - - ubiquitin-conjugating enzyme E2M

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 22192

Tuberculist Genomic Region

22225 ubiquitin specific peptidase 5 (isopeptidase T)

Details for - - ubiquitin specific peptidase 5 (isopeptidase T)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 22225

Tuberculist Genomic Region

22273 ubiquinol-cytochrome c reductase core protein 1

Details for - - ubiquinol-cytochrome c reductase core protein 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 22273

Tuberculist Genomic Region

223776 selenoprotein O

Details for - - selenoprotein O

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 223776

Tuberculist Genomic Region

225849 protein phosphatase 2, regulatory subunit B', beta

Details for - - protein phosphatase 2, regulatory subunit B', beta

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 225849

Tuberculist Genomic Region

232807 protein phosphatase 1, regulatory (inhibitor) subunit 12C

Details for - - protein phosphatase 1, regulatory (inhibitor) subunit 12C

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 232807

Tuberculist Genomic Region

269639 zinc finger protein 512

Details for - - zinc finger protein 512

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 269639

Tuberculist Genomic Region

27399 inositol hexaphosphate kinase 1

Details for - - inositol hexaphosphate kinase 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 27399

Tuberculist Genomic Region

28199 DDB1 and CUL4 associated factor 11

Details for - - DDB1 and CUL4 associated factor 11

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 28199

Tuberculist Genomic Region

328580 tubulin, gamma complex associated protein 6

Details for - - tubulin, gamma complex associated protein 6

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 328580

Tuberculist Genomic Region

414108 RIKEN cDNA 9230114K14 gene

Details for - - RIKEN cDNA 9230114K14 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 414108

Tuberculist Genomic Region

54131 interferon regulatory factor 3

Details for - - interferon regulatory factor 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 54131

Tuberculist Genomic Region

57314 negative elongation factor complex member C/D, Th1l

Details for RP23-59M10.1 - negative elongation factor complex member C/D, Th1l

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 57314

Tuberculist Genomic Region

58248 RIKEN cDNA 1700123O20 gene

Details for MNCb-2990 - RIKEN cDNA 1700123O20 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 58248

Tuberculist Genomic Region

68738 acyl-CoA synthetase short-chain family member 1

Details for RP23-156P22.4 - acyl-CoA synthetase short-chain family member 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68738

Tuberculist Genomic Region

69871 protein phosphatase 1, regulatory subunit 35

Details for - - protein phosphatase 1, regulatory subunit 35

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 69871

Tuberculist Genomic Region

70804 progesterone receptor membrane component 2

Details for - - progesterone receptor membrane component 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 70804

Tuberculist Genomic Region

76499 CLIP associating protein 2

Details for - - CLIP associating protein 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 76499

Tuberculist Genomic Region

78246 PHD finger protein 23

Details for RP23-172M21.13-002 - PHD finger protein 23

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 78246

Tuberculist Genomic Region

78412 RIKEN cDNA 3110062M04 gene

Details for - - RIKEN cDNA 3110062M04 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 78412

Tuberculist Genomic Region

13185 Down syndrome critical region gene 3

Details for - - Down syndrome critical region gene 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 13185

Tuberculist Genomic Region

17193 methyl-CpG binding domain protein 4

Details for - - methyl-CpG binding domain protein 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17193

Tuberculist Genomic Region

17939 N-acetyl galactosaminidase, alpha

Details for - - N-acetyl galactosaminidase, alpha

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17939

Tuberculist Genomic Region

216440 amplified in osteosarcoma

Details for - - amplified in osteosarcoma

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 216440

Tuberculist Genomic Region

216445 Rho GTPase activating protein 9

Details for - - Rho GTPase activating protein 9

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 216445

Tuberculist Genomic Region

216805 folliculin

Details for RP23-180B18.1 - folliculin

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 216805

Tuberculist Genomic Region

227099 postmeiotic segregation increased 1 (S. cerevisiae)

Details for - - postmeiotic segregation increased 1 (S. cerevisiae)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 227099

Tuberculist Genomic Region

228913 zinc finger protein 217

Details for RP23-233M15.1 - zinc finger protein 217

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 228913

Tuberculist Genomic Region

235339 dihydrolipoamide S-acetyltransferase (E2 component of pyruvate dehydrogenase complex)

Details for - - dihydrolipoamide S-acetyltransferase (E2 component of pyruvate dehydrogenase complex)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 235339

Tuberculist Genomic Region

26889 ceroid-lipofuscinosis, neuronal 8

Details for - - ceroid-lipofuscinosis, neuronal 8

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 26889

Tuberculist Genomic Region

27267 cysteinyl-tRNA synthetase

Details for - - cysteinyl-tRNA synthetase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 27267

Tuberculist Genomic Region

327762 DNA replication helicase 2 homolog (yeast)

Details for - - DNA replication helicase 2 homolog (yeast)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 327762

Tuberculist Genomic Region

56401 leprecan 1

Details for RP23-344D2.11-004 - leprecan 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 56401

Tuberculist Genomic Region

67397 endoplasmic reticulum protein 29

Details for - - endoplasmic reticulum protein 29

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67397

Tuberculist Genomic Region

68877 MAF1 homolog (S. cerevisiae)

Details for - - MAF1 homolog (S. cerevisiae)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68877

Tuberculist Genomic Region

73658 spinster homolog 1

Details for - - spinster homolog 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 73658

Tuberculist Genomic Region

79221 histone deacetylase 9

Details for - - histone deacetylase 9

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 79221

Tuberculist Genomic Region

TFs percTargets pValue
V_KROX_Q6_M00982 0.958333 0.00000414
Displaying 1 - 1 of 1
GO Terms
NA
Motif1 Score Motif1 Consensus Motif1 Matches Motif2 Score Motif2 Consensus Motif2 Matches
1.21 CGTCGC NA 1.27 CGTCGCGT Max.2, Sp100.2
Motif1 E-Value Motif1 Consensus Motif1 Matches Motif1 Model Motif2 E-Value Motif2 Consensus Motif2 Matches Motif2 Model
0.62 GGGGCN NA NA 0.73 TGGGGNNG NA NA

3p UTR PITA

miRNAs percTargets pValue
NA
miRNAs percTargets pValue
NA
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