PITA_7 megaCluster: 11 Residual: 0.06 | Macrophage Network Portal

Summary

Title	Cluster	Residual	Bicluster Conditions	Residual Permutation P-Value	Var. Exp. First PC	Var. Exp. First PC Perm. P-Value
PITA_7	11	0.06	15	0	0.994624	0

Members

Displaying 1 - 6 of 6

110033 kinesin family member 22 Details for - - kinesin family member 22 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 110033 Tuberculist Genomic Region	12449 cyclin F Details for - - cyclin F GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 12449 Tuberculist Genomic Region
17279 maternal embryonic leucine zipper kinase Details for RP23-382O11.1 - maternal embryonic leucine zipper kinase GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 17279 Tuberculist Genomic Region	20878 aurora kinase A Details for - - aurora kinase A GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 20878 Tuberculist Genomic Region
22137 Ttk protein kinase Details for - - Ttk protein kinase GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 22137 Tuberculist Genomic Region	224171 RIKEN cDNA C330027C09 gene Details for - - RIKEN cDNA C330027C09 gene GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 224171 Tuberculist Genomic Region

TFBS DB TF

TFs	percTargets	pValue
SP1_MA0079.2, V_GABPA_04_M02858, V_SP1_03_M02281, V_WT1_Q6_01_M02036, V_SP4_03_M02810, Gabpa.2, V_RREB1_01_M00257, V_BCL6B_04_M02844, Sp4.1, V_ZFP281_01_M01597	1, 1, 1, 1, 1, 1, 1, 1, 1, 1	0

GO Terms

Displaying 1 - 1 of 1

GO Terms
NA

Upstream MEME Motif

Motif1 E-Value	Motif1 Consensus	Motif1 Matches	Motif2 E-Value	Motif2 Consensus	Motif2 Matches
390	AATTCAAA	NA	1400	AGCCAATCAC	NFYA_MA0060.1, V$NFYC_Q5_M02107, V$NFY_C_M00209, V$NFYA_Q5_M02106, V$NFY_Q6_M00185, V$ALPHACP1_01_M00687, V$NFY_01_M00287, V$NFY_Q6_01_M00775, V$CAAT_01_M00254, V$CAAT_C_M00200

Upstream Weeder Motif

Motif1 Score	Motif1 Consensus	Motif1 Matches	Motif2 Score	Motif2 Consensus	Motif2 Matches
1.95	CGTCGG	NA	2.49	CGYTCGCC	NA

3p UTR Weeder

Motif1 E-Value	Motif1 Consensus	Motif1 Matches	Motif1 Model	Motif2 E-Value	Motif2 Consensus	Motif2 Matches	Motif2 Model
1.72	GACCGT	NA	NA	2.06	TAAMGGCC	NA	NA

3p UTR PITA

miRNAs	percTargets	pValue
NA

3p UTR TargetScan

miRNAs	percTargets	pValue
NA

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