TargetScan_154 megaCluster: 3 Residual: 0.23

Summary

Title Cluster Residual Bicluster Conditions Residual Permutation P-Value Var. Exp. First PC Var. Exp. First PC Perm. P-Value
TargetScan_154 3 0.23 15 0 0.895564 0

Members

Displaying 1 - 38 of 38
100503596 predicted gene, 19789

Details for - - predicted gene, 19789

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100503596

Tuberculist Genomic Region

17187 Max protein

Details for - - Max protein

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17187

Tuberculist Genomic Region

245536 predicted gene 614

Details for RP23-440J15.1 - predicted gene 614

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 245536

Tuberculist Genomic Region

619308 RIKEN cDNA F830208F22 gene

Details for - - RIKEN cDNA F830208F22 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 619308

Tuberculist Genomic Region

71934 carbonic anhydrase 13

Details for - - carbonic anhydrase 13

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 71934

Tuberculist Genomic Region

71956 ring finger protein 135

Details for RP23-345E8.1 - ring finger protein 135

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 71956

Tuberculist Genomic Region

140559 chymotrypsin-like

Details for - - chymotrypsin-like

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 109660

Tuberculist Genomic Region

15558 immunoglobulin superfamily, member 8

Details for - - immunoglobulin superfamily, member 8

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 140559

Tuberculist Genomic Region

15894 5-hydroxytryptamine (serotonin) receptor 2A

Details for - - 5-hydroxytryptamine (serotonin) receptor 2A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15558

Tuberculist Genomic Region

16890 intercellular adhesion molecule 1

Details for - - intercellular adhesion molecule 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15894

Tuberculist Genomic Region

18356 lipase, hormone sensitive

Details for mCG_147818 - lipase, hormone sensitive

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 16890

Tuberculist Genomic Region

19124 olfactory receptor 56

Details for RP23-54N20.6 - olfactory receptor 56

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 18356

Tuberculist Genomic Region

192198 protein C receptor, endothelial

Details for RP23-388H13.2 - protein C receptor, endothelial

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 19124

Tuberculist Genomic Region

20218 leucine rich repeat containing 4

Details for - - leucine rich repeat containing 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 192198

Tuberculist Genomic Region

208043 KH domain containing, RNA binding, signal transduction associated 1

Details for RP23-151A15.11-002 - KH domain containing, RNA binding, signal transduction associated 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20218

Tuberculist Genomic Region

226517 SET domain containing 1B

Details for - - SET domain containing 1B

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 208043

Tuberculist Genomic Region

230088 Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)

Details for - - Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 226517

Tuberculist Genomic Region

230979 family with sequence similarity 214, member B

Details for RP23-124L1.9 - family with sequence similarity 214, member B

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 230088

Tuberculist Genomic Region

268749 tumor necrosis factor receptor superfamily, member 14 (herpesvirus entry mediator)

Details for RP24-89N4.1 - tumor necrosis factor receptor superfamily, member 14 (herpesvirus entry mediator)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 230979

Tuberculist Genomic Region

54483 ring finger protein 31

Details for - - ring finger protein 31

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 268749

Tuberculist Genomic Region

68087 Mediterranean fever

Details for - - Mediterranean fever

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 54483

Tuberculist Genomic Region

68267 dephospho-CoA kinase domain containing

Details for RP23-463E7.9 - dephospho-CoA kinase domain containing

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68087

Tuberculist Genomic Region

71086 solute carrier family 25 (mitochondrial carrier, glutamate), member 22

Details for - - solute carrier family 25 (mitochondrial carrier, glutamate), member 22

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68267

Tuberculist Genomic Region

71566 RIKEN cDNA 4933412E12 gene

Details for - - RIKEN cDNA 4933412E12 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 71086

Tuberculist Genomic Region

74153 CXADR-like membrane protein

Details for - - CXADR-like membrane protein

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 71566

Tuberculist Genomic Region

76089 ubiquitin-like modifier activating enzyme 7

Details for - - ubiquitin-like modifier activating enzyme 7

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 74153

Tuberculist Genomic Region

77578 Rap guanine nucleotide exchange factor (GEF) 2

Details for - - Rap guanine nucleotide exchange factor (GEF) 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 76089

Tuberculist Genomic Region

78830 B cell CLL/lymphoma 9

Details for - - B cell CLL/lymphoma 9

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 77578

Tuberculist Genomic Region

79233 solute carrier family 25 (mitochondrial carrier, Aralar), member 12

Details for RP23-299A2.2 - solute carrier family 25 (mitochondrial carrier, Aralar), member 12

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 78830

Tuberculist Genomic Region

98432 zinc finger protein 319

Details for - - zinc finger protein 319

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 79233

Tuberculist Genomic Region

56489 PH domain and leucine rich repeat protein phosphatase 1

Details for - - PH domain and leucine rich repeat protein phosphatase 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 98432

Tuberculist Genomic Region

27215 inhibitor of kappaB kinase epsilon

Details for - - inhibitor of kappaB kinase epsilon

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 56489

Tuberculist Genomic Region

320404 5-azacytidine induced gene 2

Details for - - 5-azacytidine induced gene 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 27215

Tuberculist Genomic Region

64292 inositol 1,4,5-trisphosphate 3-kinase B

Details for - - inositol 1,4,5-trisphosphate 3-kinase B

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 320404

Tuberculist Genomic Region

69440 prostaglandin E synthase

Details for RP23-221O14.6 - prostaglandin E synthase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 64292

Tuberculist Genomic Region

80750 DENN/MADD domain containing 6B

Details for - - DENN/MADD domain containing 6B

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 69440

Tuberculist Genomic Region

20779 NEDD4 binding protein 1

Details for - - NEDD4 binding protein 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 80750

Tuberculist Genomic Region

Details for RP23-169M4.1 - Rous sarcoma oncogene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20779

Tuberculist Genomic Region

TFBS DB TF

TFs percTargets pValue
NR4A2_nuclearreceptor_full_dimeric_16_1 0.228571 0.000000193

GO Terms

Displaying 1 - 1 of 1
GO Terms
NA

Upstream MEME Motif

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif2 E-Value Motif2 Consensus Motif2 Matches
0.000011 AAAAAGAARGAA NA 0.0000027 CCTCCCCYTCYC V$MAZ_Q6_M00649, V$CKROX_Q2_M01175, V$MAZ_Q6_01_M02023

Upstream Weeder Motif

Motif1 Score Motif1 Consensus Motif1 Matches Motif2 Score Motif2 Consensus Motif2 Matches
0.98 CGGCGA NA 1.02 GGTCGNCG NA

3p UTR Weeder

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif1 Model Motif2 E-Value Motif2 Consensus Motif2 Matches Motif2 Model
0.79 GGTGGACC NA NA NA NA NA

3p UTR PITA

miRNAs percTargets pValue
NA

3p UTR TargetScan

miRNAs percTargets pValue
NA

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