TargetScan_17 megaCluster: 7 Residual: 0.19 | Macrophage Network Portal

Summary

Title	Cluster	Residual	Bicluster Conditions	Residual Permutation P-Value	Var. Exp. First PC	Var. Exp. First PC Perm. P-Value
TargetScan_17	7	0.19	15	0	0.931425	0

Members

Displaying 1 - 33 of 33

100502698 RIKEN cDNA 1700021K19 gene Details for mCG_130134 - RIKEN cDNA 1700021K19 gene GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 100502698 Tuberculist Genomic Region	100929 tRNA-yW synthesizing protein 1 homolog (S. cerevisiae) Details for - - tRNA-yW synthesizing protein 1 homolog (S. cerevisiae) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 100929 Tuberculist Genomic Region
106326 oxysterol binding protein-like 11 Details for - - oxysterol binding protein-like 11 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 106326 Tuberculist Genomic Region	108645 methionine adenosyltransferase II, beta Details for RP23-382C18.2 - methionine adenosyltransferase II, beta GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 108645 Tuberculist Genomic Region
108682 glutamic pyruvate transaminase (alanine aminotransferase) 2 Details for - - glutamic pyruvate transaminase (alanine aminotransferase) 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 108682 Tuberculist Genomic Region	12371 caspase 9 Details for RP23-395H4.3 - caspase 9 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 12371 Tuberculist Genomic Region
12576 cyclin-dependent kinase inhibitor 1B Details for - - cyclin-dependent kinase inhibitor 1B GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 12576 Tuberculist Genomic Region	13185 Down syndrome critical region gene 3 Details for - - Down syndrome critical region gene 3 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 13185 Tuberculist Genomic Region
13448 docking protein 1 Details for - - docking protein 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 13448 Tuberculist Genomic Region	14467 glioblastoma amplified sequence Details for - - glioblastoma amplified sequence GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 14467 Tuberculist Genomic Region
170719 oxidation resistance 1 Details for - - oxidation resistance 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 170719 Tuberculist Genomic Region	17850 methylmalonyl-Coenzyme A mutase Details for - - methylmalonyl-Coenzyme A mutase GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 17850 Tuberculist Genomic Region
18747 protein kinase, cAMP dependent, catalytic, alpha Details for - - protein kinase, cAMP dependent, catalytic, alpha GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 18747 Tuberculist Genomic Region	192678 Ras association (RalGDS/AF-6) domain family member 3 Details for - - Ras association (RalGDS/AF-6) domain family member 3 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 192678 Tuberculist Genomic Region
19687 replication factor C (activator 1) 1 Details for - - replication factor C (activator 1) 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 19687 Tuberculist Genomic Region	20817 serine/arginine-rich protein specific kinase 2 Details for - - serine/arginine-rich protein specific kinase 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 20817 Tuberculist Genomic Region
214952 ras homolog gene family, member T2 Details for - - ras homolog gene family, member T2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 214952 Tuberculist Genomic Region	217473 ankyrin repeat and MYND domain containing 2 Details for - - ankyrin repeat and MYND domain containing 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 217473 Tuberculist Genomic Region
217737 AHA1, activator of heat shock protein ATPase 1 Details for - - AHA1, activator of heat shock protein ATPase 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 217737 Tuberculist Genomic Region	226539 aspartyl-tRNA synthetase 2 (mitochondrial) Details for - - aspartyl-tRNA synthetase 2 (mitochondrial) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 226539 Tuberculist Genomic Region
227094 transmembrane protein 194B Details for - - transmembrane protein 194B GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 227094 Tuberculist Genomic Region	232337 zinc finger protein 637 Details for - - zinc finger protein 637 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 232337 Tuberculist Genomic Region
270076 glutaryl-Coenzyme A dehydrogenase Details for - - glutaryl-Coenzyme A dehydrogenase GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 270076 Tuberculist Genomic Region	30838 F-box and WD-40 domain protein 4 Details for - - F-box and WD-40 domain protein 4 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 30838 Tuberculist Genomic Region
52830 proline-rich nuclear receptor coactivator 2 Details for RP23-161N17.3 - proline-rich nuclear receptor coactivator 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 52830 Tuberculist Genomic Region	66948 acyl-Coenzyme A dehydrogenase family, member 8 Details for - - acyl-Coenzyme A dehydrogenase family, member 8 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 66948 Tuberculist Genomic Region
67397 endoplasmic reticulum protein 29 Details for - - endoplasmic reticulum protein 29 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 67397 Tuberculist Genomic Region	67939 prolyl-tRNA synthetase domain containing 1 Details for RP23-92B18.3 - prolyl-tRNA synthetase domain containing 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 67939 Tuberculist Genomic Region
68767 WAS protein family homolog Details for - - WAS protein family homolog GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 68767 Tuberculist Genomic Region	74114 carnitine O-octanoyltransferase Details for - - carnitine O-octanoyltransferase GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 74114 Tuberculist Genomic Region
75415 Rho GTPase activating protein 12 Details for - - Rho GTPase activating protein 12 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 75415 Tuberculist Genomic Region	78334 cyclin-dependent kinase 19 Details for - - cyclin-dependent kinase 19 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 78334 Tuberculist Genomic Region
79221 histone deacetylase 9 Details for - - histone deacetylase 9 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 79221 Tuberculist Genomic Region

TFBS DB TF

TFs	percTargets	pValue
Elf3.2	0.30303	0.00000596

GO Terms

Displaying 1 - 1 of 1

GO Terms
NA

Upstream MEME Motif

Motif1 E-Value	Motif1 Consensus	Motif1 Matches	Motif2 E-Value	Motif2 Consensus	Motif2 Matches
0.00000016	ARAAAAWAAAAA	NA	0.000051	NGGGCGGGGCRG	Klf4_MA0039.2, SP1_MA0079.2, SP1_MA0079.1, V$SP1_Q6_01_M00931, V$SP4_Q5_M01273, V$SP1_Q4_01_M00932, V$SP1_Q6_M00196, V$GC_01_M00255, V$KLF7_03_M02773, V$SP1_Q2_01_M00933, V$GKLF_02_M01588, V$SP1_02_M01303, V$SP1_03_M02281, V$UF1H3BETA_Q6_M01068, V$SP1_01_M00008, V$SP2_01_M01783, V$ZFP281_04_M02831, V$MAZR_01_M00491, V$SMAD4_04_M02898, V$CKROX_Q2_M01175, V$ZFP281_01_M01597, V$CACD_01_M01113, V$MAZ_Q6_01_M02023, V$SP4_03_M02810, V$ZFP740_03_M02834, V$MAZ_Q6_M00649, V$ZFP410_04_M02936, V$EGR1_Q6_M01873, V$E2F3_Q6_M02089, V$EGR1_06_M02744, V$BCL6B_04_M02844, V$EKLF_Q5_M01874, V$KROX_Q6_M00982, V$ZBP89_Q4_M01816, V$ZNF219_01_M01122, V$SP1SP3_Q4_M01219, V$SP4_04_M02914, V$FKLF_Q5_M01837, V$CACCCBINDINGFACTOR_Q6_M00721, V$FPM315_01_M01587, V$ASCL2_04_M02841, V$ETF_Q6_M00695, Klf7.1, Zfp281.2, Smad3.1, Sp4.1, Zfp740.1, Egr1.1, Zfp410.1, Bcl6b.2, Sp4.2, Ascl2.2, Zif268.1, SP4_C2H2_full_monomeric_17_1, KLF16_C2H2_DBD_monomeric_11_1, SP1_C2H2_DBD_monomeric_11_1, SP3_C2H2_DBD_monomeric_11_1, KLF14_C2H2_DBD_monomeric_14_1, SP8_C2H2_DBD_monomeric_12_1, KLF13_C2H2_full_monomeric_18_1, Klf12_C2H2_DBD_monomeric_15_1, ZNF740_C2H2_full_monomeric_10_1

Upstream Weeder Motif

Motif1 Score	Motif1 Consensus	Motif1 Matches	Motif2 Score	Motif2 Consensus	Motif2 Matches
1.15	CGGCGA	NA	1.38	CGNAGCGG	NA

3p UTR Weeder

Motif1 E-Value	Motif1 Consensus	Motif1 Matches	Motif1 Model	Motif2 E-Value	Motif2 Consensus	Motif2 Matches	Motif2 Model
0.49	CGTTCG	NA	NA	0.6	GTANNAAG	NA	NA

3p UTR PITA

miRNAs	percTargets	pValue
NA

3p UTR TargetScan

miRNAs	percTargets	pValue
mmu-miR-669a-3-3p	0.37931	0.0000148

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