Rv0081 transcriptional regulator, ArsR family

Rv0081 (transcriptional regulator, ArsR family) is predicted to be co-regulated in modules bicluster_0143 with residual 0.53 and bicluster_0391 with residual 0.53.

This regulation is possibly mediated by two de-novo identified cis-regulatory motifs in each module with e-values , 0.00 and 130.00 for bicluster_0143 and 0.00 and 0.00 for bicluster_0391 respectively.

These modules are enriched for following go terms: cellular respiration, energy derivation by oxidation of organi..., generation of precursor metabolites and ..., oxidation-reduction process, NADH dehydrogenase activity, oxidoreductase activity, acting on NAD(P..., oxidoreductase activity, acting on NAD(P... .

This gene is found to be for growth on cholesterol.

Mutant available?: Yes

Displaying 81 - 90 of 352
Gene Target Differential Expression Distance Expression pvalue Type
No -138 -0.11 0.452781 CDS
PE family protein
No 9 0.3 0.20214 Primary.TSS
Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1)
No 5 -0.43 0.000053 Primary.TSS
Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
No 69 -0.01 0.973521 Primary.TSS
Putative secreted protein
No 36 0.15 0.417138 CDS
No 29 0.11 0.511655 CDS
Induced -90 1.43 0.000000000464 Primary.TSS
cyclic nucleotide-binding protein
No 40 -0.48 0.00151927 CDS
Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Induced -34 1.79 0.0000000000000186 Primary.TSS
DNA-binding response regulator TrcR
Repressed 43 -1.77 1.88e-16 Primary.TSS
not assigned to any KEGG Pathway.
GO:0005886

plasma membrane

plasma membrane

Details: 
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
GO Category: 
cellular_component
1284
Total items in this category:  
No TFOE experiment results were found

TRIP log2 fold abundance change

NA
Displaying 1 - 17 of 17
Condition Count Day Doublings Fitness U.I Plots
D0U 27 0 0.00 10.64 U
D3I 3 3 3.83 9.89 I
D3U 3 3 3.83 9.37 U
D5I 9 5 6.00 8.58 I
D5U 17 5 6.00 10.80 U
D7I 18 7 8.14 6.92 I
D7U 19 7 8.14 10.06 U
D14I 4 14 15.63 3.26 I
D14U 4 14 15.63 8.26 U
D17I 3 17 19.15 3.92 I
D17U 3 17 19.15 8.44 U
D21I 4 21 23.23 3.88 I
D21U 4 21 23.23 7.77 U
D24I 3 24 26.60 3.58 I
D24U 3 24 26.60 8.02 U
D28I 4 28 30.61 3.78 I
D28U 4 28 30.61 7.39 U