Rv0767c Transcriptional regulator, TetR family

Rv0767c (Transcriptional regulator, TetR family) is predicted to be co-regulated in modules bicluster_0152 with residual 0.50 and bicluster_0418 with residual 0.49.

This regulation is possibly mediated by two de-novo identified cis-regulatory motifs in each module with e-values , 0.00 and 0.09 for bicluster_0152 and 0.00 and 7.60 for bicluster_0418 respectively.

These modules are enriched for following go terms: .

This gene is found to be for growth on cholesterol.

Mutant available?:

Displaying 11 - 20 of 68
Gene Target Differential Expression Distance Expression pvalue Type
COG2907: Amine oxidase, flavin-containing
No -110 -0.19 0.583007 CDS
No -91 -0.12 0.814196 Antisense.TSS
Repressed 8 -1.55 0.00000163 CDS
Lactate-responsive regulator LldR in Enterobacteria, GntR family
Repressed 3 -0.76 0.0468208 CDS
Phospholipid/glycerol acyltransferase
No -85 -0.02 0.960688 Primary.TSS
Hypothetical, related to broad specificity phosphatases COG0406
No 66 -0.04 0.921957 CDS
27 kDa antigen Cfp30B
No 65 0.19 0.551488 CDS
No -90 0.27 0.611075 CDS
Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79)
No -52 0.43 0.322714 Primary.TSS
Repressed -63 -0.8 0.000700024 CDS
not assigned to any KEGG Pathway.
No TFOE experiment results were found

TRIP log2 fold abundance change

NA
Displaying 1 - 17 of 17
Condition Count Day Doublings Fitness U.I Plots
D0U 27 0 0.00 9.09 U
D3I 3 3 3.83 9.40 I
D3U 3 3 3.83 8.83 U
D5I 9 5 6.00 7.76 I
D5U 17 5 6.00 10.15 U
D7I 18 7 8.14 5.92 I
D7U 19 7 8.14 9.03 U
D14I 4 14 15.63 1.95 I
D14U 4 14 15.63 7.19 U
D17I 3 17 19.15 I
D17U 3 17 19.15 7.17 U
D21I 4 21 23.23 1.11 I
D21U 4 21 23.23 6.00 U
D24I 3 24 26.60 I
D24U 3 24 26.60 6.70 U
D28I 4 28 30.61 1.86 I
D28U 4 28 30.61 5.86 U