Rv0967

Rv0967 () is predicted to be co-regulated in modules bicluster_0053 with residual 0.49 and bicluster_0389 with residual 0.58.

This regulation is possibly mediated by two de-novo identified cis-regulatory motifs in each module with e-values , 3.20 and 1,200.00 for bicluster_0053 and 0.00 and 0.02 for bicluster_0389 respectively.

These modules are enriched for following go terms: mitochondrial electron transport, NADH t..., mitochondrial ATP synthesis coupled elec....

This gene is found to be for growth on cholesterol.

Mutant available?:

Displaying 161 - 170 of 186
Gene Target Differential Expression Distance Expression pvalue Type
ESAT-6 like protein EsxU
No -29 -0.65 0.999609 Internal.TSS
SSU ribosomal protein S4p (S9e)
No -68 0.11 0.999609 Antisense.TSS
POSSIBLE TRANSMEMBRANE PROTEIN
No -118 0.08 0.999609 CDS
MCE-associated alanine and valine rich protein
No -102 -0.21 0.999609 CDS
MCE-family lipoprotein LprK (MCE-family lipoprotein Mce1e)
No 37 -0.06 0.999609 CDS
MCE-family protein Mce1D
No -55 -0.08 0.999609 Antisense.TSS
DNA integrity scanning protein disA
No 52 -0.16 0.999609 CDS
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)
No -123 -0.2 0.999609 CDS
ESX-1 secretion system protein (Rv3614c)
No -40 -0.13 0.999609 Primary.TSS
Highly immunodominant RD1 (Region of Difference 1)-dependent secreted antigen specific for Mycobacterium tuberculosis infection
No 18 -0.11 0.999609 Primary.TSS
not assigned to any KEGG Pathway.
GO:0003677

DNA binding

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively with DNA (deoxyribonucleic acid).
GO Category: 
molecular_function
37
Total items in this category:  
GO:0005507

copper ion binding

copper ion binding

Details: 
Interacting selectively and non-covalently with copper (Cu) ions.
GO Category: 
molecular_function
2
Total items in this category:  
GO:0005886

plasma membrane

plasma membrane

Details: 
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
GO Category: 
cellular_component
1284
Total items in this category:  
GO:0010272

response to silver ion

response to silver ion

Details: 
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a silver ion stimulus.
GO Category: 
biological_process
1
Total items in this category:  
GO:0042803

protein homodimerization activity

protein homodimerization activity

Details: 
Interacting selectively and non-covalently with an identical protein to form a homodimer.
GO Category: 
molecular_function
83
Total items in this category:  
GO:0046688

response to copper ion

response to copper ion

Details: 
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a copper ion stimulus.
GO Category: 
biological_process
5
Total items in this category:  
No TFOE experiment results were found

TRIP log2 fold abundance change

NA
Displaying 1 - 17 of 17
Condition Count Day Doublings Fitness U.I Plots
D0U 27 0 0.00 10.92 U
D3I 3 3 3.83 10.17 I
D3U 3 3 3.83 10.03 U
D5I 9 5 6.00 11.01 I
D5U 17 5 6.00 10.79 U
D7I 18 7 8.14 10.18 I
D7U 19 7 8.14 9.74 U
D14I 4 14 15.63 7.85 I
D14U 4 14 15.63 8.17 U
D17I 3 17 19.15 6.98 I
D17U 3 17 19.15 7.23 U
D21I 4 21 23.23 7.38 I
D21U 4 21 23.23 7.69 U
D24I 3 24 26.60 5.64 I
D24U 3 24 26.60 6.84 U
D28I 4 28 30.61 6.75 I
D28U 4 28 30.61 7.10 U