Rv1719 Transcriptional regulator, IclR family

Rv1719 (Transcriptional regulator, IclR family) is predicted to be co-regulated in modules bicluster_0221 with residual 0.50 and bicluster_0535 with residual 0.57.

This regulation is possibly mediated by two de-novo identified cis-regulatory motifs in each module with e-values , 15.00 and 780.00 for bicluster_0221 and 11.00 and 3,000.00 for bicluster_0535 respectively.

These modules are enriched for following go terms: .

This gene is found to be for growth on cholesterol.

Mutant available?:

Displaying 11 - 20 of 37
Gene Target Differential Expression Distance Expression pvalue Type
Putative membrane protein found fused to lysyl-tRNA synthetase like protein / Lysyl-tRNA synthetase (class II) related protein found fused to membrane protein
No -117 -0.47 0.20588 Antisense.TSS
Translation initiation factor 3
No -117 0.11 0.833667 Primary.TSS
3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)
No -58 -0.31 0.785271 CDS
Transcriptional regulator, TetR family
No 60 0.79 0.0625588 Antisense.TSS
Transcriptional regulator, TetR family
No 42 0.79 0.0625588 Internal.TSS
Diacylglycerol kinase-related protein
No -114 0.1 0.932486 CDS
Molybdopterin-guanine dinucleotide biosynthesis protein MobA
No -56 -0.07 0.920935 CDS
No -142 0.36 0.502525 Primary.TSS
No -134 0.06 0.964372 CDS
POSSIBLE CONSERVED TRANSMEMBRANE PROTEIN
No -30 0.21 0.741733 Antisense.TSS
not assigned to any KEGG Pathway.
No TFOE experiment results were found

TRIP log2 fold abundance change

NA
Displaying 1 - 17 of 17
Condition Count Day Doublings Fitness U.I Plots
D3I 3 3 3.83 15.20 I
D14U 4 14 15.63 15.14 U
D3U 3 3 3.83 15.11 U
D17U 3 17 19.15 15.08 U
D0U 27 0 0.00 14.97 U
D14I 4 14 15.63 14.78 I
D21U 4 21 23.23 14.67 U
D24U 3 24 26.60 14.64 U
D7U 19 7 8.14 14.60 U
D7I 18 7 8.14 14.40 I
D28U 4 28 30.61 14.30 U
D17I 3 17 19.15 14.18 I
D21I 4 21 23.23 13.69 I
D5U 17 5 6.00 13.15 U
D5I 9 5 6.00 13.05 I
D24I 3 24 26.60 12.97 I
D28I 4 28 30.61 12.41 I