| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,301,094 | Δ1 bp | 95.1% | intergenic (+51/‑58) | urtA → / → urtC | urea ABC transporter permease UrtA/urea ABC transporter permease UrtC |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,301,094 | 0 | C→. | 95.1% | 9.0 ‑2.3 ‑1.4 | 101 | intergenic (+51/‑58) | urtA/urtC | urea ABC transporter permease UrtA/urea ABC transporter permease UrtC |
| Reads supporting (aligned to +/- strand): new base (74/22): ref base (2/3): total (76/25) | ||||||||||
| Fisher's exact test strand distribution p-value = 9.56e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 3.67e-02 | ||||||||||
Only 100 of 122 total aligned reads displayed.
CCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.GCG.CC.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGTCCCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCTGTCCAAAAACCCCTCGGTGCTG > NC_014034/1300995‑1301190
|
ccgcccgcGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGTc < 1:896662/101‑1 (MQ=255)
cgcccgcGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGTcc > 2:2844993/1‑101 (MQ=255)
cgcccgcGCGGCATCATCGCGCGGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGTcc < 1:4132153/101‑1 (MQ=38)
cccgcGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGTccgg < 1:3367403/101‑3 (MQ=255)
cgcgGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGTCCGggggc < 2:2862514/101‑2 (MQ=37)
cgcgGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGTCCGggggc < 1:2731677/101‑2 (MQ=37)
gcgGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGgcg < 1:2794018/101‑1 (MQ=25)
cgGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGgcgc < 1:1523700/101‑1 (MQ=25)
cgGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGgcgc > 2:2730660/1‑101 (MQ=25)
gCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGa > 1:3269025/1‑101 (MQ=25)
gCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGACCGggggggcga > 2:3761280/1‑97 (MQ=25)
catcatCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGaa > 2:2767039/1‑101 (MQ=25)
catcatCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGaa < 1:3839458/101‑1 (MQ=25)
catcatCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGaa < 1:3121765/101‑1 (MQ=25)
catcatCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGaa < 2:4676412/101‑1 (MQ=25)
catcatCGCGCGGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGaa < 2:352818/101‑1 (MQ=25)
atcatcGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGAAg > 1:170199/1‑101 (MQ=25)
atcatcGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGAAg > 2:1368045/1‑101 (MQ=25)
tcatcGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGAAGc > 2:221191/1‑101 (MQ=25)
tcatcGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGAAGc > 1:195771/1‑101 (MQ=25)
tcatcGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGAAGc < 2:1170845/101‑1 (MQ=25)
catcGCGCTGCGCGGCCNCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGAAGcc < 2:1148728/101‑1 (MQ=21)
catcGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGAAGcc < 1:3014417/101‑1 (MQ=25)
catcGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGAAGcc > 2:4754076/1‑101 (MQ=25)
atcGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGAAGccc > 1:488930/1‑101 (MQ=21)
atcGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGAAGccc > 2:1883942/1‑101 (MQ=21)
cgcgCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGAAGccccc > 1:2050060/1‑101 (MQ=21)
cgcgCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGAAGccccc > 1:181476/1‑101 (MQ=21)
cgcgCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGAAGccccc < 2:4239684/101‑1 (MQ=21)
cgcgCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGAAGccccc < 1:3769165/101‑1 (MQ=21)
cccgcgcGCCCGCCCCGCGGGAGATGGACCCGATCCCCCCCG.CCG.CCTTTTC.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGAAGCCCCCGgc < 2:4702947/98‑1 (MQ=14)
cggcccgcccgcgccgcCGGAGATGGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGAAGCCCCCGgcg < 2:3689995/93‑1 (MQ=17)
cTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGAAGCCCCCGgcg > 2:2891035/1‑101 (MQ=21)
ggCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCa > 2:3206918/1‑101 (MQ=18)
ggCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCa > 2:1949128/1‑101 (MQ=18)
gcccccgccgcGGGAGATTGAGCCGATCCCCCCCGCCCC.CC.TTTC.ATCTTGCCCAAAATATCC.CGGGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCa < 2:4545704/96‑1 (MQ=17)
gccgGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGga > 2:2432335/1‑101 (MQ=18)
ccgggAGATTGAGCCGATCCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATACCC.CGGGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGga < 1:1128929/98‑1 (MQ=18)
gaggTTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGG.CCCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGAcc > 2:1524832/1‑101 (MQ=18)
gagaTTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGAcc > 2:4168766/1‑101 (MQ=18)
gaTTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGAcccc > 2:1638474/1‑101 (MQ=18)
ttGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGa > 1:2490759/1‑101 (MQ=18)
tgccccccccccccccC.CCG.CCTTTTC.CTCTTGCCAAAATTACCC.GGCGGGGG.CCGGGGGGCGCGACGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGAt < 2:3730674/91‑1 (MQ=255)
gacccGATCCCCCCCG.CCGCCC.TTTC.ATCTTCCCAAAAATACCC.CG.GGGGGGCCGGGGGGCGCGAACCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATg < 1:1249396/98‑1 (MQ=255)
gAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATg > 2:619853/1‑101 (MQ=18)
gAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATAC.CGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATg > 2:2428678/1‑101 (MQ=18)
gCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGac > 2:3541710/1‑101 (MQ=18)
cgaccccccccG.CCGCCC.TTTC.ATCTTCCCAAAAATACCC.CGGGGGGGT.CGGGGGGCGCGAACCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGacac < 1:1222536/96‑1 (MQ=255)
cGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGacac > 2:2543610/1‑101 (MQ=18)
cGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGacac < 1:1476167/101‑1 (MQ=18)
cGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGacac > 2:4483/1‑101 (MQ=18)
cGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGacac > 2:3758731/1‑101 (MQ=18)
cGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGAAGCCACCGGCGCCGCCAGATCCCGGAGACCCCGAGGacac > 2:2319911/1‑101 (MQ=18)
gATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGAcaca > 2:3095417/1‑101 (MQ=18)
ggcccccccG.CCG.CCTTTTC.TTGTTCCCCAAACTA.CC.CGGGGGGGGCCGGGGGCCGCGAACCCCCGGGCGCCGCCAGATCCCGGAGACCCCGATGACACAg < 2:3702819/98‑1 (MQ=255)
gCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGcc > 2:3139193/1‑101 (MQ=18)
gCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGcc < 1:3207119/101‑1 (MQ=18)
cgccgccc.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGAc < 2:1228754/95‑1 (MQ=255)
cccg.cC.CTTCAATCTTCCCAAAAATCCCC.CG.GGGGGGCCGGGGGGCGCGACCCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGAcc < 2:4567339/99‑1 (MQ=255)
gccgcccattC.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGAcc > 1:3767127/9‑101 (MQ=21)
cgccc.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCa > 2:414199/4‑101 (MQ=255)
ccc.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAg > 2:2936191/2‑101 (MQ=255)
cc.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAgg > 2:141247/1‑101 (MQ=255)
cc.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAgg > 2:4387024/1‑101 (MQ=255)
cc.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAgg > 2:3124066/1‑101 (MQ=255)
cttttC.ATCTTGCCCAAAATCCCC.CG.GGGGGGCCGGGGGGCGCGAACCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAgg < 1:1884054/99‑1 (MQ=255)
c.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAggg > 2:3936188/1‑101 (MQ=255)
c.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGG.CCCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACCCAGCCGATGACCCaaaga > 2:763098/1‑98 (MQ=255)
tttC.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGt > 2:76288/1‑101 (MQ=255)
tttC.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGt > 2:730992/1‑101 (MQ=255)
ttC.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAggggt > 1:4157744/1‑99 (MQ=255)
ttC.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGtt > 2:4682797/1‑101 (MQ=255)
ttccccccacccAAAACCTCCGCGCGGGGG.CGGGGGGGCGCAACCCCCCGGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGt < 2:195746/92‑1 (MQ=255)
tC.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTc < 1:3693310/101‑1 (MQ=255)
c.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGGGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTcc > 1:4016913/1‑101 (MQ=255)
c.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTcc > 1:158847/1‑101 (MQ=255)
c.ATCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTcc > 1:3069344/1‑101 (MQ=255)
atctgccccAAAAT.CCC.CGGGGGGGGGCCGGGGGGCCGAACCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCt < 1:2845169/95‑1 (MQ=255)
aTCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCt > 1:876718/1‑101 (MQ=255)
tCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCTg > 2:2703905/1‑101 (MQ=255)
tCTTGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCTg > 1:971056/1‑101 (MQ=255)
tGCCCAAAATATGC.CGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCTGTcc > 1:2569054/1‑101 (MQ=255)
tGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCTGTcc > 2:1039433/1‑101 (MQ=255)
tGCCCAAAATATCC.CGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCTGTcc > 2:3541939/1‑101 (MQ=255)
ccccAAAATGTCC.CGGGGGGGCTCGGGGGGCGCAACCCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCTGTcc < 2:2049939/100‑1 (MQ=255)
gccAAAATCTCC.CGGGGGGGTTCGGGGGGCGCGAGCCCCCGGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCTGTCCa < 2:3776407/100‑1 (MQ=255)
aaaaTATCC.CGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCTGTCCaaaaa > 1:1001633/1‑101 (MQ=255)
aaaaTATCC.CGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCTGTCCaaaaa > 1:3674546/1‑101 (MQ=255)
aaaaTATCC.CGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCTGTCCaaaaa > 2:2066143/1‑101 (MQ=255)
aatcccc.cGGGGGGGGGCCGGGGGCCCGACCCCCCGGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCTGTCCAAAAAc < 1:4714770/96‑1 (MQ=255)
atatCC.CGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCTGTCCAAAAAccc > 1:2528095/1‑101 (MQ=255)
atatCC.CGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCTGTCCAAAAAccc > 2:4636617/1‑101 (MQ=255)
atatCC.CGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCTGTCCAAAAAccc > 2:130027/1‑101 (MQ=255)
atCC.CGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCTGTCCAAAAACCCCt > 1:3309185/1‑101 (MQ=255)
atCC.CGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCTGTCCAAAAACCCCt > 2:2297629/1‑101 (MQ=255)
cc.cGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCTGTCCAAAAACCCCTCg > 2:3938143/1‑101 (MQ=255)
cc.cGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCTGTCCAAAAACCCCTCg > 2:2512506/1‑101 (MQ=255)
gggggT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCTGTCCAAAAACCCCTCGGTGCt > 1:4628484/1‑101 (MQ=255)
gggggT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCTGTCCAAAAACCCCTCGGTGCt > 1:690281/1‑101 (MQ=255)
ggggT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCTGTCCAAAAACCCCTCGGTGCTg > 1:2780644/1‑101 (MQ=255)
|
CCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.GCG.CC.TTTC.ATCTTGCCCAAAATATCC.CGCGGGGGTCCCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCTGTCCAAAAACCCCTCGGTGCTG > NC_014034/1300995‑1301190
Base quality scores:
ATCG
< 3 ≤
ATCG
< 16 ≤
ATCG
< 26 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|