| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,395,698 | Δ1 bp | 4.7% | intergenic (+510/‑421) | RCAP_rcc01306 → / → RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,395,698 | 0 | A→. | 4.7% | 28.4 ‑0.3 ‑0.0 | 274 | intergenic (+510/‑421) | RCAP_rcc01306/RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (5/8): ref base (122/139): total (127/147) | ||||||||||
| Fisher's exact test strand distribution p-value = 7.77e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.97e-01 | ||||||||||
Only 100 of 291 total aligned reads displayed.
CCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTG > NC_014034/1395598‑1395798
|
ccaccTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCa > 2:3385800/1‑101 (MQ=255)
ccaccTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCa < 1:3181778/101‑1 (MQ=255)
cccTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGt < 1:4373363/100‑1 (MQ=255)
cTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCg > 1:2898617/1‑101 (MQ=255)
ttGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCCTGTAGTCGGCGG.GCAGTTCGC.GCCGCGGTccc > 1:2150971/1‑99 (MQ=255)
ttGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGc > 2:2168147/1‑101 (MQ=255)
ttGCGGATTGTCACTTTCGCGGGGCGAAGCGTCACTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGc < 2:2955539/101‑1 (MQ=255)
gCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTc < 1:837972/101‑1 (MQ=255)
gCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTc < 1:3051219/101‑1 (MQ=255)
cGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTcc < 1:1902272/101‑1 (MQ=255)
ggATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTccc < 1:489977/101‑1 (MQ=255)
gATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTTGCTcccc > 2:269110/1‑101 (MQ=255)
ttGTCCCTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTcccccc < 1:4683329/101‑1 (MQ=255)
tGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCcg > 1:4134243/1‑101 (MQ=255)
gTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCcgc < 2:3137277/101‑1 (MQ=255)
gTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCcgc < 2:909710/101‑1 (MQ=255)
cTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCgggg < 2:3895058/101‑1 (MQ=255)
cgcgGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGt > 2:227404/1‑101 (MQ=255)
cgcgGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGt > 1:6269/1‑101 (MQ=255)
cgcgGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCCCgggggggg > 1:4461223/1‑98 (MQ=255)
tggtgccgctgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGt < 1:100425/91‑1 (MQ=2)
ggtgccgctgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGTg > 1:3836774/10‑101 (MQ=2)
ggtgccgctgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGTg > 1:1633061/10‑101 (MQ=2)
cgGGGCGAAGCGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTgg < 1:2103130/101‑1 (MQ=255)
tgccgctgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGTGGa > 2:3658365/8‑101 (MQ=0)
ccgctgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGTGGATc < 1:2379125/96‑1 (MQ=2)
caacgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGa < 1:1451691/97‑1 (MQ=255)
gAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGaa > 2:3745145/1‑101 (MQ=255)
ctgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGTGGATCGaa < 1:187125/99‑1 (MQ=2)
aaGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa > 1:3741065/1‑101 (MQ=255)
tgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAGCCTGTCGGCGGCGAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGTAGATCGaaa > 2:2423521/2‑101 (MQ=2)
tgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGTGGATCGaaa > 2:1916127/2‑101 (MQ=2)
cGTCCCTCCCCCCGGGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.g < 1:881762/101‑1 (MQ=255)
tCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGt < 1:1221657/101‑1 (MQ=255)
tCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGACGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGt > 2:4102582/1‑101 (MQ=255)
cccacgcccccGCGGGGGCGGGGATGGAAACATCTGCATGTGGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGt < 1:4345951/95‑1 (MQ=37)
gCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTAt > 2:4451473/1‑101 (MQ=255)
cTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATg > 2:1562879/1‑101 (MQ=255)
cTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATg < 2:3342316/101‑1 (MQ=255)
tCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATgg > 1:2558229/1‑101 (MQ=255)
cccccccGCGGGGGCGTGGAGCAAACCACCCGCATGTACTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATgg < 2:1392721/100‑1 (MQ=25)
ccccccGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGa < 1:2692802/101‑1 (MQ=255)
ccccGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGGATGGATc > 2:1456807/1‑101 (MQ=255)
cccGGGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCt < 1:1740058/101‑1 (MQ=255)
cgcgGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTgg < 2:3622294/101‑1 (MQ=255)
gcgGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGgc < 1:3921331/101‑1 (MQ=255)
gcgGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGgc < 1:2287525/101‑1 (MQ=255)
cgGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGgcg > 2:11217/1‑101 (MQ=255)
cgGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGgcg > 2:4469853/1‑101 (MQ=255)
cgGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGgcg > 1:74763/1‑101 (MQ=255)
cgGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGgcg > 1:1083018/1‑101 (MQ=255)
gggggCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGgcgc > 2:4289686/1‑101 (MQ=255)
gggggCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGgcgc > 2:3981513/1‑101 (MQ=255)
ggggCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCa > 1:4028952/1‑101 (MQ=255)
ggggCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTAGCGCa < 1:3465406/101‑1 (MQ=255)
cGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACg > 1:1103903/1‑101 (MQ=255)
gTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACgg > 1:2239688/1‑101 (MQ=255)
tGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..a > 2:3550930/1‑101 (MQ=255)
ggATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..aa > 2:4600258/1‑101 (MQ=255)
gATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..aaa > 2:3093844/1‑101 (MQ=255)
gATCGAAACATCCGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..aaa < 1:2834193/101‑1 (MQ=255)
tCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGt > 1:1647718/1‑101 (MQ=255)
cGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTc > 2:859857/1‑101 (MQ=255)
cGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTc < 1:3551149/101‑1 (MQ=255)
cGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTc < 2:1895610/101‑1 (MQ=255)
gAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCt < 1:3679406/101‑1 (MQ=255)
gAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCt > 2:945078/1‑101 (MQ=255)
aaaAATTTGCATGTAGTCGGCGG.GAAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTg < 2:2898441/101‑1 (MQ=255)
aaCATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTgt > 2:2466824/1‑101 (MQ=255)
ctaTCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTgtc < 2:713545/99‑1 (MQ=255)
aTCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTgtcgt > 1:2441259/1‑101 (MQ=255)
aTCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTgtcag > 1:713618/1‑99 (MQ=255)
aTCTGCAGGGAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTgtcgt < 1:1693849/101‑1 (MQ=255)
cTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGtcgtcg > 1:4527098/1‑101 (MQ=255)
cTGCATGTAGGCGGCGG.GCAGTCCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGtcgtcg < 2:1982267/101‑1 (MQ=255)
tGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGc < 2:4083736/101‑1 (MQ=255)
cATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTc > 2:463331/1‑101 (MQ=255)
cATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTc < 1:333034/101‑1 (MQ=255)
tGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTccc < 1:2465553/101‑1 (MQ=255)
gTAGTTGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGCTCTGGCGCAAACGG..AAAGTCTGTCGTCGCTcccc > 2:1742456/1‑101 (MQ=255)
gTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTcccc < 1:3277560/101‑1 (MQ=255)
cggcgg.GCAGTGCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCcgcg < 1:945155/101‑1 (MQ=255)
cgg.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCgggg > 1:3352971/1‑101 (MQ=255)
g.gCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCCGGGGc > 2:1102208/1‑101 (MQ=255)
gCAGTGCGT.GCCGCAGTCGCTCCCCCCGCGGGGTCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCTCGCGGGGGCg < 1:4102824/101‑1 (MQ=38)
ggtCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTgg < 2:1088333/99‑1 (MQ=255)
gTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTgg < 2:6264/101‑1 (MQ=255)
tcaagattcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATCGCCGATCTGGGTAAGGCCGGTGGTCGCTCCCCCCGCGGGGGCGTg > 1:3084491/9‑101 (MQ=2)
gA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCg < 2:2605675/101‑1 (MQ=255)
caagattcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATCGCCGATCTGGGTAAGGCCGGTGGTCGCTCCCCCCGCGGGGGCGTgg > 2:1038370/8‑101 (MQ=2)
aagattcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATCGCCGATCTGGGTAAGGCCGGTGGTCGCTCCCCCCGCGGGGGCGTGGa < 1:1176314/95‑1 (MQ=2)
a.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGa < 1:45639/101‑1 (MQ=255)
attcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATCGCCGATCTGGGTAAGGCCGGTGGTCGCTCCCCCCGCGGGGGCGTGGATCg < 2:2278787/98‑1 (MQ=2)
attcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATCGCCGATCTGGGTAAGGCCGGTGGTCGCTCCCCCCGCGGGGGCGTGGATCg < 2:2783779/98‑1 (MQ=2)
attcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATCGCCGATCTGGGTAAGGCCGGTGGTCGCTCCCCCCGCGGGGGCGTGGATCg < 2:3329326/98‑1 (MQ=2)
cGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc > 1:250344/1‑101 (MQ=255)
tcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATCGCCGATCTGGGTAAGGCCGGTGGTCGCTCCCCCCGCGGGGGCGTGGATCGaa < 1:2985863/100‑1 (MQ=2)
tcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATCGCCGATCTGGGTAAGGCCGGTGGTCGCTCCCCCCGCGGGGGCGTGGATCGaa > 2:2237326/2‑101 (MQ=2)
gCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcc > 1:1038270/1‑101 (MQ=255)
cAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGCAACCt > 2:2350673/1‑101 (MQ=255)
|
CCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGG.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTG > NC_014034/1395598‑1395798
Base quality scores:
ATCG
< 3 ≤
ATCG
< 17 ≤
ATCG
< 25 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|