BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_014034	2,040,373	Δ1 bp	97.4%	intergenic (‑121/‑267)	RCAP_rcc01888 ← / → RCAP_rcc01889	hypothetical protein/hypothetical protein

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	2,040,373	0	C→.	97.4%	7.9 ‑1.0 ‑0.4	230	intergenic (‑121/‑267)	RCAP_rcc01888/RCAP_rcc01889	hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand): new base (114/110): ref base (1/3): total (115/115)
Fisher's exact test strand distribution p-value = 3.67e-01
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 3.86e-01

Only 100 of 242 total aligned reads displayed.


GGCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGTGGGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCACCCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.G.CGCGCCATAAGTGAGCCCACCCGGTTCGGAGGGTTGGATGCA  >  NC_014034/2040272‑2040470


ggCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCAc                                                                                                     <  1:38760/101‑1 (MQ=255)


ggCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCAc                                                                                                     <  1:1861967/101‑1 (MQ=255)


ggCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCAc                                                                                                     <  2:2218030/101‑1 (MQ=255)


 gCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCAcc                                                                                                    <  2:2534237/101‑1 (MQ=255)


    ccGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCACCGgg                                                                                                 <  2:797329/101‑1 (MQ=255)


       gCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCg                                                                                             >  1:3617303/1‑101 (MQ=255)


       gCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCg                                                                                             <  2:3813046/101‑1 (MQ=255)


       gCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCg                                                                                             >  2:3153863/1‑101 (MQ=255)


          tctGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCGAAAGCA.CCGGGGCGGAt                                                                                          >  1:3558789/1‑101 (MQ=255)


          tctGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGAt                                                                                          >  1:1003774/1‑101 (MQ=255)


           ctGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATg                                                                                         <  1:1652973/101‑1 (MQ=255)


             gggTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGc                                                                                       <  1:3468724/101‑1 (MQ=255)


               gTTGGGATTGAAAACGACCTGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCtt                                                                                     <  2:2347448/101‑1 (MQ=255)


               gTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCtt                                                                                     >  2:873716/1‑101 (MQ=255)


                ttGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTa                                                                                    <  2:778017/101‑1 (MQ=255)


                ttGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTa                                                                                    <  1:27501/101‑1 (MQ=255)


                ttGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTa                                                                                    <  1:312784/101‑1 (MQ=255)


                 tGGGATGGAAAAAGACCTGAACGGCCAGGGGCCAGGCGCAGGC.TTGGGGGACCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTAc                                                                                   >  2:1115541/1‑101 (MQ=255)


                 tGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTAc                                                                                   >  2:3091173/1‑101 (MQ=255)


                    gATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTAcgcg                                                                                >  1:3216305/1‑101 (MQ=255)


                     aTGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCgg                                                                               >  1:1917845/1‑101 (MQ=255)


                     aTGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCgg                                                                               >  2:1420558/1‑101 (MQ=255)


                      tGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGt                                                                              <  2:1285781/101‑1 (MQ=255)


                      tGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGt                                                                              >  1:3045048/1‑101 (MQ=255)


                       ggAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTa                                                                             <  1:2492974/101‑1 (MQ=255)


                         aaaaaGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATg                                                                           <  1:2799712/101‑1 (MQ=255)


                         aaaaaGACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATg                                                                           <  2:409555/101‑1 (MQ=255)


                              gACCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGcgcg                                                                      >  2:3771247/1‑101 (MQ=255)


                               aCCGGAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGt                                                                     <  1:4583432/101‑1 (MQ=255)


                                  ggAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGcc                                                                  >  1:2961986/1‑101 (MQ=255)


                                  ggAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGcc                                                                  >  1:2684237/1‑101 (MQ=255)


                                  ggAACGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGcc                                                                  >  1:1999485/1‑101 (MQ=255)


                                    aaCGGCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCaa                                                                >  1:781287/1‑101 (MQ=255)


                                       ggCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGGTGGCTTACGCGGTATGGCGCGTGCCAAAGa                                                             >  1:3099975/1‑101 (MQ=255)


                                       ggCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGa                                                             >  2:935715/1‑101 (MQ=255)


                                        gCCAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGAc                                                            <  1:4189385/101‑1 (MQ=255)


                                         ccAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGAcg                                                           <  1:2417115/101‑1 (MQ=255)


                                         ccAGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGAcg                                                           <  1:4314508/101‑1 (MQ=255)


                                           aGGGGCCAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGAcggc                                                         <  1:2236876/101‑1 (MQ=255)


                                                ccAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCg                                                    >  2:1912383/1‑101 (MQ=255)


                                                 caggggCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGc                                                   >  2:4019604/6‑101 (MQ=255)


                                                 cAGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGAGGCCGc                                                   >  2:4124531/1‑101 (MQ=255)


                                                  aGACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCa                                                  >  1:319776/1‑101 (MQ=255)


                                                   gACGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCaa                                                 >  1:1126591/1‑101 (MQ=255)


                                                    aCGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCaaa                                                >  1:2610266/1‑101 (MQ=255)


                                                    aCGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCaaa                                                <  2:3458882/101‑1 (MQ=255)


                                                     cGCCGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGCCTTACGCGGTATGGCGCTTGCCAAAGACGGCGGCCGCAAAg                                               <  2:1548789/101‑1 (MQ=255)


                                                     cGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAg                                               >  1:1765073/1‑101 (MQ=255)


                                                     cGCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGAGGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAg                                               <  1:2038372/101‑1 (MQ=255)


                                                      gCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAg.g                                             >  1:4181469/1‑101 (MQ=255)


                                                      gCAGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAg.g                                             >  2:2977936/1‑101 (MQ=255)


                                                        aGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.g.cc                                          >  2:1232396/1‑100 (MQ=255)


                                                        aGGCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.g.cc                                          >  1:1500848/1‑100 (MQ=255)


                                                         ggCGT.GGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.g.ccg                                         <  2:1403534/101‑3 (MQ=255)


                                                            cgtgggggATCCGGTCGAAGGTCAGACGTTGGGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.g.ccgcg                                       <  1:3364154/98‑5 (MQ=255)


                                                             gtgggggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTGTGGCGCGTGCCAAAGACGGCGGCCGCAAAG.g.ccgcgc                                      >  1:3300238/3‑96 (MQ=255)


                                                             gtgggggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.g.ccgcgc                                      >  1:2069383/3‑96 (MQ=255)


                                                              tgggggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCCGCGcc                                      <  1:2879966/100‑1 (MQ=255)


                                                              tgggggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCCGCGcc                                      <  1:2516273/100‑1 (MQ=255)


                                                               gggggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCCGCGCCa                                     >  1:3390640/1‑101 (MQ=255)


                                                                ggggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAACGACGGCGGCCGCAAAG.GCCGCGCCAt                                    <  2:418914/101‑1 (MQ=255)


                                                                ggggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCCGCGCCAt                                    <  1:3018797/101‑1 (MQ=255)


                                                                  ggATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCCGCGCCATaa                                  <  1:4019846/101‑1 (MQ=255)


                                                                   gATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCCGCGCCATAAg                                 <  2:611537/101‑1 (MQ=255)


                                                                    aTCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCCGCGCCATAAGt                                <  1:3764863/101‑1 (MQ=255)


                                                                    aTCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCCGCGCCATAAGt                                >  2:3336814/1‑101 (MQ=255)


                                                                     tCCGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCCGCGCCATAAGTg                               <  1:1167106/101‑1 (MQ=255)


                                                                      ccGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCCGCGCCATAAGTGa                              <  1:912586/101‑1 (MQ=255)


                                                                      ccGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCCGCGCCATAAGTGa                              >  2:2916667/1‑101 (MQ=255)


                                                                       cGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCCGCGCCATAAGTGAg                             >  2:4578106/1‑101 (MQ=255)


                                                                       cGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCCGCGCCATAAGTGAg                             >  1:4375298/1‑101 (MQ=255)


                                                                       cGGTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCCGCGCCATAAGTGAg                             >  1:2705883/1‑101 (MQ=255)


                                                                        ggTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCCGCGCCATAAGTGAGc                            >  1:224797/1‑101 (MQ=255)


                                                                         gTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCCGCGCCATAAGTGAGcc                           >  2:4251837/1‑101 (MQ=255)


                                                                         gTCGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCCGCGCCATAAGTGAGcc                           <  2:2773961/101‑1 (MQ=255)


                                                                          tCGAAGGTCAGACGTTGNGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCCGCGCCATAAGTGAGccc                          <  2:2046318/101‑1 (MQ=255)


                                                                           cGAAGGTCAGACGTTTTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCCGCGCCATAAGTGAGCCCa                         <  2:3390434/101‑1 (MQ=255)


                                                                           cGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCCGCGCCATAAgatcggaag                         >  1:1772006/1‑93 (MQ=255)


                                                                           cGAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCCGCGCCATAAGTGAGCCCa                         <  2:3044860/101‑1 (MQ=255)


                                                                            gAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCCGCGCCATAAGTGAGCCCAc                        >  2:1657551/1‑101 (MQ=255)


                                                                            gAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCCGCGCCATAAGTGAGCCCAc                        <  2:2462341/101‑1 (MQ=255)


                                                                            gAAGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCCGCGCCATAAGTGAGCCCAc                        >  1:2347965/1‑101 (MQ=255)


                                                                             aaGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCCGCGCCATAAGTGAGCCCAcc                       >  2:3744183/1‑101 (MQ=255)


                                                                              aGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCCGCGCCATAAGTGAGCCCAccg                      >  1:674352/1‑100 (MQ=255)


                                                                               ggTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCCGCGCCATAAGTGAGCCCAccgg                     <  2:3626470/101‑3 (MQ=255)


                                                                                gTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCCGCGCCATAAGTGAGCCCAccggt                    >  1:537568/1‑98 (MQ=255)


                                                                                gTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCCGCGCCATAAGTGAGCCCAccggt                    >  1:4239708/1‑98 (MQ=255)


                                                                                gTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCCGCGCCATAAGTGAGCCCAccggt                    >  2:3909019/1‑98 (MQ=255)


                                                                                  cAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCCGCGCCATAAGTGAGCCCA.CCGGTTc                 >  2:2659605/1‑101 (MQ=255)


                                                                                   aGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCCGCGCCATAAGTGAGCCCA.CCGGTTCg                <  1:4713911/101‑1 (MQ=255)


                                                                                      cGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCCGCGCCATAAGTGAGCCCA.CCGGTTCGGAg             <  2:319742/101‑1 (MQ=255)


                                                                                      cGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GACGCGCCATAAGTGAGCCCA.CCGGTTCGGAg             >  2:50344/1‑101 (MQ=255)


                                                                                       gTTGTGCAAAAGC.GCCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCCGCGCCATAAGTGAGCCCA.CCGGTTCGGAgg            <  2:3478322/101‑1 (MQ=255)


                                                                                         tgtgCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCCGCGCCATAAGTGAGCCCA.CCGGTTCGGAggtt          <  2:4458919/101‑3 (MQ=255)


                                                                                         tgtgCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCCGCGCCATAAGTGAGCCCA.CCGGTTCGGAggtt          >  1:919276/1‑99 (MQ=255)


                                                                                         tgtgCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGAGGCCGCAAAG.GCCGCGCCATAAGTGAGCCCA.CCGGTTCGGAggtt          >  1:2821383/1‑99 (MQ=255)


                                                                                           tgCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCCGCGCCATAAGTGAGCCCA.CCGGTTCGGAggttgg        <  1:2284200/101‑5 (MQ=255)


                                                                                               aaaGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.GCCGCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGc   <  2:548299/101‑1 (MQ=255)


                                                                                               aaaGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGAGGCCGCAAAG.GCCGCGCCATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGc   >  2:1988203/1‑101 (MQ=255)


                                                                                                aaGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGGGGCCGCAAAGCC.CGCGCCATAAGCGAGCCCA.CCGGTTCGGA.GGTTGGATGCa  >  1:3492040/1‑101 (MQ=255)


GGCACCGGCCTCTGGGTTGGGATGGAAAAAGACCGGAACGGCCAGGGGCCAGACGCAGGCGTGGGGGGATCCGGTCGAAGGTCAGACGTTGTGCAAAAGCACCCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAG.G.CGCGCCATAAGTGAGCCCACCCGGTTCGGAGGGTTGGATGCA  >  NC_014034/2040272‑2040470

Base quality scores:


ATCG

< 3 ≤


ATCG

< 20 ≤


ATCG

< 29 ≤


ATCG

< 34 ≤


ATCG

< 41 ≤


ATCG