| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,950,758 | Δ1 bp | 1.7% | intergenic (+101/‑59) | RCAP_rcc02761 → / → RCAP_rcc02762 | glutathione S‑transferase/4Fe‑4S ferredoxin, iron‑sulfur cluster binding protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,950,758 | 0 | G→. | 1.7% | 6.6 ‑1.8 ‑1.7 | 293 | intergenic (+101/‑59) | RCAP_rcc02761/RCAP_rcc02762 | glutathione S‑transferase/4Fe‑4S ferredoxin, iron‑sulfur cluster binding protein |
| Reads supporting (aligned to +/- strand): new base (1/4): ref base (173/115): total (174/119) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.62e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 2.03e-02 | ||||||||||
Only 100 of 318 total aligned reads displayed.
AGCAAGCCGGGGGCTCTGCCCCCGGACCCCCGGGATATTTGAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGCCCGCGCGATCGGCTTT > NC_014034/2950658‑2950858
|
agcaagcCGGGGGCTCTGCCCCCGGACCCCCGGGATATTTGAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCg < 2:2557145/101‑1 (MQ=255)
gcaagcCGGGGGCTCTGCCCCCGGACCCCCGGGATATTTGAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGt > 2:3011852/1‑101 (MQ=255)
gcaagcCGGGGGCTCTGCCCCCGGACCCCCGGGATATTTGAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGt > 1:4527545/1‑101 (MQ=255)
caagcCGGGGGCTCTGCCCCCGGACCCCCGGGGTATTTTGGGCAAAAAGAAAACCCCCCCCTTTATCTTCCCCCCAAAATCCC.GGGG..GGGGATTTGCCGTc > 1:3383289/1‑101 (MQ=9)
caagcCGGGGGCTCTGCCCCCGGACCCCCGGGACATTTGAGGCAAGATGAAACACGCCCCTTTCATCTTGGCCCAAATATCCC.GGGG..GTGAATTTGCCGTc > 1:1889350/1‑101 (MQ=255)
aagcCGGGGGCTCTGCCCCCGGACCCCCGGGATATTTGAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCa > 2:276749/1‑101 (MQ=255)
aagcCGGGGGCTCTGCCCCCGGACCCCCGGGATATTTGAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCa < 2:2469831/101‑1 (MQ=255)
gcCGGGGGCTCTGCCCCCGGACCCCCGGGATATTTGAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAgg < 2:909018/101‑1 (MQ=255)
gcCGGGGGCTCTGCCCCCGGACCCCCGGGATATTTGAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAgg < 1:1517517/101‑1 (MQ=255)
cGGGGGCTCTGCCCCCGGACCCCCGGGATATTTGAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCa < 2:4601102/101‑1 (MQ=255)
gggggCTCTGCCCCCGGACCCCCGGGATATTTGAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCaa > 2:2355644/1‑101 (MQ=255)
gggggCTCTGCCCCCGGACCCCCGGGATATTTGAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCaa > 1:4186376/1‑101 (MQ=255)
gggggCTCTGCCCCCGGACCCCCGGGATATTTGAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GGGAATTTGCCGTCAGGcca > 1:943798/1‑99 (MQ=255)
ggggCTCTGCCCCCGGACCCCCGGGATATTTGAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCaaa > 2:3177569/1‑101 (MQ=255)
gggCTCTGCCCCCGGACCCCCGGGATATTTGAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCAAag < 1:2642116/101‑1 (MQ=255)
ggCTCTGCCCCCGGACCCCCGGGATATTTGAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCAAaga < 2:1619554/101‑1 (MQ=255)
ggCTCTGCCCCCGGACCCCCGGGATATTTGAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCAAaga < 2:2861373/101‑1 (MQ=255)
ctGCCCCCGGACCCCCGGGATATTTGAGGCAAGATGAAACACGCCCGTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.gggg > 2:4102474/1‑101 (MQ=255)
cttcgcctcaCCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGG..GTGAATTGGCCG.AAGGCCAAGA.gggg.gg > 2:2067505/10‑100 (MQ=25)
ttcgcctcaCCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGG..GTGAATTGGCCG.AAGGCCAAGA.gggg.ggc > 1:3681076/9‑99 (MQ=25)
gCCCCCGGACCCCCGGGATATTTGAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCAAAAA.gggg.gg > 1:155802/1‑100 (MQ=255)
cccccGGACCCCCGGGATATTTGAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCa < 2:1803456/101‑1 (MQ=255)
cccGGACCCCCGGGATATTTGAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGc > 2:509551/1‑101 (MQ=255)
cgctccccccGGGATATTTGCGGCAAGATGAAGGGGCATGATTTCATCTTGCCCGAAATATCCC.AGGG..GTGAATTGGCC.AAAGGCCAAGA.GGGG.GCAGcgc < 2:3215774/96‑3 (MQ=2)
cGGACCCCCGGGATATTTGAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTc > 2:439562/1‑101 (MQ=255)
ggACCCCCGGGATATTTGAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTcc > 1:2280564/1‑101 (MQ=255)
ggACCCCCGGGATATTTGAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTcc > 2:1540921/1‑101 (MQ=255)
ctccccccGGGATATTTGCGGCAAGATGAAGGGGCATGATTTCATCTTGCCCGAAATATCCC.AGGG..GTGAATTGGCC.AAAGGCCAAGA.GGGG.GCAGCGccc > 2:2696761/4‑101 (MQ=2)
tccccccGGGATATTTGCGGCAAGATGAAGGGGCATGATTTCATCTTGCCCGAAATATCCC.AGGG..GTGAATTGGCC.AAAGGCCAAGA.GGGG.GCAGCGcccc < 1:1608539/99‑1 (MQ=2)
gACCCCCGGGATATTTGAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTccc > 1:3589380/1‑101 (MQ=255)
aCCCCCGGGATATTTGAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTcccc > 1:4271625/1‑101 (MQ=255)
ccccGGGATATTTGAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCt < 1:1433221/101‑1 (MQ=255)
ccGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGG..GGGAATTGGCCG.AAGGCCAAGC.GGGGCGCAGCGCCCCCttt > 2:754805/1‑99 (MQ=18)
gggATATTTGAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGccc < 2:125936/101‑1 (MQ=255)
ggATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGG..GTGAATTGGCCG.AAGGCCAAGAGGGGG.GCAGCGCCCCCttttcg > 2:3693302/1‑96 (MQ=17)
ggATATTTGAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGcccc > 1:2890378/1‑101 (MQ=255)
atatTTGAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCgg > 2:4378238/1‑101 (MQ=255)
atatTTGAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGCCGGGCAAAGA.GGGG.GCAGCTTCCCCGGCCCCgg > 1:1140624/1‑101 (MQ=25)
tatTTGAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGc < 2:2771842/101‑1 (MQ=255)
tatTTGAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGc > 2:3315493/1‑101 (MQ=255)
tatTTGAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGc < 2:3417831/101‑1 (MQ=255)
tatTTGAGGCAAGATCAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGc < 2:1877120/101‑1 (MQ=255)
atTTGAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCt > 1:814222/1‑101 (MQ=255)
tttGAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTg < 2:4186130/101‑1 (MQ=255)
tttGAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTg > 2:4515207/1‑101 (MQ=255)
tttGAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTg > 2:13493/1‑101 (MQ=255)
ttGAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTga < 2:2188631/101‑1 (MQ=255)
ttGAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTga < 2:1595881/101‑1 (MQ=255)
gAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTgagg < 2:2900780/101‑1 (MQ=255)
gAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTgagg > 2:591324/1‑101 (MQ=255)
gAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTgagg > 2:1095417/1‑101 (MQ=255)
gCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTgagggag > 1:2362729/1‑101 (MQ=255)
aTGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGa < 1:142613/101‑1 (MQ=255)
aTGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGa > 2:3088732/1‑101 (MQ=255)
aTGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGa > 1:4748811/1‑101 (MQ=255)
tGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGaa < 1:1808975/101‑1 (MQ=255)
tGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGaa > 1:4409298/1‑101 (MQ=255)
gAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAAc > 1:3092623/1‑101 (MQ=255)
gAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAAc < 2:2382042/101‑1 (MQ=255)
aaaCACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAAcg > 1:2767068/1‑100 (MQ=255)
aaCACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTg > 1:3973281/1‑101 (MQ=255)
cacGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGa < 1:1672176/101‑1 (MQ=255)
ccccTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAAcc > 1:170749/1‑101 (MQ=255)
cccTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCt < 1:4514302/101‑1 (MQ=255)
cTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTg > 1:3325181/1‑101 (MQ=255)
tttCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGa > 1:3866811/1‑101 (MQ=255)
ttCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGaa > 1:3151733/1‑101 (MQ=255)
ttCATCTTGCCCCAAATAGCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGaa < 1:4608082/101‑1 (MQ=255)
tCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAg < 2:1681447/101‑1 (MQ=255)
cTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGAccc < 1:4698871/101‑1 (MQ=255)
ttGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCg > 2:1136435/1‑101 (MQ=255)
tGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGc > 2:3265105/1‑101 (MQ=255)
ctccccAAAAATCCC.GGGGGTGTGAATTCGCCGAGAGAAAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGAccc < 2:3655313/99‑1 (MQ=255)
gCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGcc > 1:3467611/1‑101 (MQ=255)
ccccAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCt < 1:1001811/101‑1 (MQ=255)
cccAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTg < 2:4036686/101‑1 (MQ=255)
cAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGAt > 1:783209/1‑101 (MQ=255)
aaaTATCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATc > 2:4249134/1‑101 (MQ=255)
aaaTATCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATc > 1:239635/1‑101 (MQ=255)
aaaTATCCA.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATc < 1:4102716/101‑1 (MQ=255)
atatCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGa > 2:3955886/1‑101 (MQ=255)
tatCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGaa > 2:4483415/1‑101 (MQ=255)
tatCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGaa > 1:2941462/1‑101 (MQ=255)
attcc.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAag > 1:2707183/4‑101 (MQ=255)
atCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAag < 1:4152447/101‑1 (MQ=255)
c.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGc > 2:1388538/1‑101 (MQ=255)
gggg..gTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGcc > 1:1227201/1‑101 (MQ=255)
gggg..gTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGcc < 2:2305601/101‑1 (MQ=255)
gggg..gTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGcc > 1:565558/1‑101 (MQ=255)
ggg..gTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGccc < 2:3531056/101‑1 (MQ=255)
gAATTTGCCGTCAGGCAAAGC.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGCCcgcgcg > 1:374311/1‑101 (MQ=255)
gAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGCCCCGCCTGATCGAAGAGGCCggcgcg > 1:2135088/1‑101 (MQ=255)
gAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGCCcgcgcg < 1:3019338/101‑1 (MQ=255)
aaTTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGCCCGCGCGa > 1:2492040/1‑101 (MQ=255)
aTTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGCCCGCGCGAt > 2:4626313/1‑101 (MQ=255)
aTTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGCCCGCGCGAt > 1:3800783/1‑101 (MQ=255)
ttGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGCCCGCGCGATCg > 2:4576830/1‑101 (MQ=255)
tGCCGTAAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCAGATCGAAGAGGCCCCCGCGATCgg > 1:974680/1‑101 (MQ=255)
cGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGCCCGCGCGATCGGCtt < 2:1821104/101‑1 (MQ=255)
gTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGCCCGCGCGATCGGCttt < 1:3245032/101‑1 (MQ=255)
|
AGCAAGCCGGGGGCTCTGCCCCCGGACCCCCGGGATATTTGAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTTGCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGCCCGCGCGATCGGCTTT > NC_014034/2950658‑2950858
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 29 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|