| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,950,759 | Δ1 bp | 2.4% | intergenic (+102/‑58) | RCAP_rcc02761 → / → RCAP_rcc02762 | glutathione S‑transferase/4Fe‑4S ferredoxin, iron‑sulfur cluster binding protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,950,759 | 0 | T→. | 2.4% | 10.9 ‑0.4 ‑0.2 | 292 | intergenic (+102/‑58) | RCAP_rcc02761/RCAP_rcc02762 | glutathione S‑transferase/4Fe‑4S ferredoxin, iron‑sulfur cluster binding protein |
| Reads supporting (aligned to +/- strand): new base (5/2): ref base (165/115): total (171/121) | ||||||||||
| Fisher's exact test strand distribution p-value = 7.04e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 6.02e-01 | ||||||||||
Only 100 of 318 total aligned reads displayed.
GCAAGCCGGGGGCTCTGCCCCCGGACCCCCGGGATATTT.GAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGCCCGCGCGATCGGCTTTG > NC_014034/2950659‑2950859
|
gcaagcCGGGGGCTCTGCCCCCGGACCCCCGGGATATTT.GAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGt > 2:3011852/1‑101 (MQ=255)
gcaagcCGGGGGCTCTGCCCCCGGACCCCCGGGATATTT.GAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGt > 1:4310411/1‑101 (MQ=255)
aagcCGGGGGCTCTGCCCCCGGACCCCCGGGATATTT.GAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCa > 2:276749/1‑101 (MQ=255)
aagcCGGGGGCTCTGCCCCCGGACCCCCGGGATATTT.GAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCa < 2:2469831/101‑1 (MQ=255)
aagcCGGGGGCTCTGCCCCCGGACCCCCGGGATATTT.GAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCa < 1:827861/101‑1 (MQ=255)
gcCGGGGGCTCTGCCCCCGGACCCCCGGGATATTT.GAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCAgg < 2:909018/101‑1 (MQ=255)
cGGGGGCTCTGCCCCCGGACCCCCGGGATATTT.GAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCAGGCa < 2:4601102/101‑1 (MQ=255)
cGGGGGCTCTGCCCCCGGACCCCCGGGATATTT.GAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GGGAATTT.GCCGTCAGGCa > 1:1745077/1‑101 (MQ=255)
gggggCTCTGCCCCCGGACCCCCGGGATATTT.GAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCAGGCaa > 2:2355644/1‑101 (MQ=255)
ggggCTCTGCCCCCGGACCCCCGGGATATTT.GAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCAGGCaaa > 2:3177569/1‑101 (MQ=255)
gggCTCTGCCCCCGGTCCCCCCGGATTTTTGGGGGCAAGATGAAACCCGCCCCTTTCATCTTG.CCCAAATTTTCC.GGGG..GTGAATTT.GCCGTCAGGCAAag < 2:1106538/101‑1 (MQ=21)
ggCTCTGCCCCCGGACCCCCGGGATATTT.GAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAaga < 2:2861373/101‑1 (MQ=255)
ggCTCTGCCCCCGGACCCCCGGGATATTT.GAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAaga < 2:1620731/101‑1 (MQ=255)
ctctGCCCCCGGACCCCCGGGATATTT.GAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.gg > 1:1952527/1‑101 (MQ=255)
ctctGCCCCCGGACCCCCGGGATATTT.GAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.gg < 2:1607431/101‑1 (MQ=255)
ctGCCCCCGGACCCCCGGGATATTT.GAGGCAAGATGAAACACGCCCGTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.gggg > 2:4102474/1‑101 (MQ=255)
ctGCCCCCGGACCCCCGGGATATTT.GAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.gggg > 2:1767295/1‑101 (MQ=255)
tGCCCCCGGACCCCCGGGATATTT.GAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.gggg.g > 2:1804674/1‑101 (MQ=255)
tGCCCCCGGACCCCCGGGATATTT.GAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.gggg.g > 1:1681552/1‑101 (MQ=255)
cttcgcctcaCCCCCGGGATATTT.GGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGG..GTGAATTG.GCCG.AAGGCCAAGA.gggg.gg > 2:2067505/10‑100 (MQ=25)
ttcgcctcaCCCCCGGGATATTT.GGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGG..GTGAATTG.GCCG.AAGGCCAAGA.gggg.ggc > 1:4116521/9‑99 (MQ=25)
cccccGGACCCCCGGGATATTT.GAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCa < 1:3803636/101‑1 (MQ=255)
ccccGGACCCCCGGGATATTT.GAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAg < 1:2420912/101‑1 (MQ=255)
cccGGACCCCCGGGATATTT.GAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGc > 2:509551/1‑101 (MQ=255)
cgctccccccGGGATATTT.GCGGCAAGATGAAGGGGCATGATTTCATCTTGCCCGAAATATCCC.AGGG..GTGAATTG.GCC.AAAGGCCAAGA.GGGG.GCAGcgc < 2:3215774/96‑3 (MQ=2)
cGGACCCCCGGGATATTT.GAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTc > 2:439562/1‑101 (MQ=255)
ggACCCCCGGGATATTT.GAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTcc < 2:1546001/101‑1 (MQ=255)
ggACCCCCGGGATATTT.GAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTcc > 1:2363703/1‑101 (MQ=255)
ctccccccGGGATATTT.GCGGCAAGATGAAGGGGCATGATTTCATCTTGCCCGAAATATCCC.AGGG..GTGAATTG.GCC.AAAGGCCAAGA.GGGG.GCAGCGccc > 2:2696761/4‑101 (MQ=2)
aCCCCCGGGATATTT.GAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTcccc > 1:2688823/1‑101 (MQ=255)
ccccGGGATATTT.GAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCt < 1:945291/101‑1 (MQ=255)
ccccGGGATATTT.GAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCt < 1:2959554/101‑1 (MQ=255)
ccGGGATATTT.GGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGG..GGGAATTG.GCCG.AAGGCCAAGC.GGGGCGCAGCGCCCCCttt > 2:754805/1‑99 (MQ=18)
ggATATTT.GGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGG..GTGAATTG.GCCG.AAGGCCAAGAGGGGG.GCAGCGCCCCCttttcg > 2:3693302/1‑96 (MQ=17)
gATATTT.GAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCg > 1:491/1‑101 (MQ=255)
atatTT.GAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCgg > 2:4378238/1‑101 (MQ=255)
atatTT.GAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCgg > 2:2635041/1‑101 (MQ=255)
atatTT.GAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGCCGGGCAAAGA.GGGG.GCAGCTTCCCCGGCCCCgg > 1:1140624/1‑101 (MQ=25)
tatTT.GAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGc < 2:2771842/101‑1 (MQ=255)
tatTT.GAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGc > 2:3315493/1‑101 (MQ=255)
tatTT.GAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGc < 2:3417831/101‑1 (MQ=255)
atTT.GAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCt > 1:56973/1‑101 (MQ=255)
ttt.GAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTg > 2:4515207/1‑101 (MQ=255)
ttt.GAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTg < 2:4186130/101‑1 (MQ=255)
tt.GAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTga > 1:4616179/1‑101 (MQ=255)
tt.GAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTga < 1:3870864/101‑1 (MQ=255)
tt.GAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTga < 2:2188631/101‑1 (MQ=255)
gAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTgagg < 2:2900780/101‑1 (MQ=255)
gAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTgagg > 2:591324/1‑101 (MQ=255)
ggCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTgaggga < 1:4524893/101‑1 (MQ=255)
ggCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTgaggga < 1:3390470/101‑1 (MQ=255)
gCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTgagggag < 1:2727203/101‑1 (MQ=255)
aGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGTCg > 1:3727944/1‑101 (MQ=255)
aTGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGa > 2:3088732/1‑101 (MQ=255)
tGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGaa > 1:2305734/1‑101 (MQ=255)
gAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAAc < 2:2382042/101‑1 (MQ=255)
gAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAAc > 1:3655542/1‑101 (MQ=255)
aaCACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTg > 1:4214212/1‑101 (MQ=255)
cGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGaaa < 1:276783/101‑1 (MQ=255)
cGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGaaa > 1:2550916/1‑101 (MQ=255)
ccTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCtt > 1:4463017/1‑101 (MQ=255)
tttCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGa < 1:1260357/101‑1 (MQ=255)
ttCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGaa < 1:417158/101‑1 (MQ=255)
cATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGa > 2:1850804/1‑101 (MQ=255)
cATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGa > 1:787846/1‑101 (MQ=255)
tGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGc > 2:3265105/1‑101 (MQ=255)
ctccccAAAAATCCC.GGGGGTGTGAATTC.GCCGAGAGAAAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGAccc < 2:3655313/99‑1 (MQ=255)
ccccAAATATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCt < 1:1001811/101‑1 (MQ=255)
cccAAATATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTg < 2:4036686/101‑1 (MQ=255)
aaaTATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATc > 1:1518001/1‑101 (MQ=255)
aaaTATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATc > 1:1502308/1‑101 (MQ=255)
aaaTATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATc > 2:4249134/1‑101 (MQ=255)
aaaTATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATc > 1:3180795/1‑101 (MQ=255)
aaTATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGAccagatcggaag > 1:1612850/1‑91 (MQ=255)
aaTATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCg > 2:1349904/1‑101 (MQ=255)
aaTATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCg > 1:2146819/1‑101 (MQ=255)
atatCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGa > 2:3955886/1‑101 (MQ=255)
atatCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGa < 1:2896590/101‑1 (MQ=255)
tatCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.TGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGaa < 1:4065913/101‑1 (MQ=255)
tatCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGaa > 2:4483415/1‑101 (MQ=255)
tatCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGaa > 2:1045339/1‑101 (MQ=255)
cgcggggg..gGGAATTTGGCCGAGAGAAAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAag < 1:3118596/97‑1 (MQ=255)
c.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGc > 1:3269617/1‑101 (MQ=255)
c.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGc > 2:1456889/1‑101 (MQ=255)
gggg..gTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGcc < 2:2305601/101‑1 (MQ=255)
ggg..gTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGccc < 2:3531056/101‑1 (MQ=255)
gAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGCCcgcgcg > 1:3468258/1‑101 (MQ=255)
gAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGCCcgcgcg > 1:3341728/1‑101 (MQ=255)
gAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGCCcgcgcg > 1:1429856/1‑101 (MQ=255)
aTTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGCCCGCGCGAt > 2:4626313/1‑101 (MQ=255)
ttt.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGCCCGCGCGATc > 1:3771084/1‑101 (MQ=255)
ttt.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGCCCGCGCGATc > 1:4739829/1‑101 (MQ=255)
ttt.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGCCCGCGCGATc > 2:1294164/1‑101 (MQ=255)
tt.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGCCCGCGCGATCg > 2:4576830/1‑101 (MQ=255)
ccGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGCCCGCGCGATCGGCt > 1:4568585/1‑101 (MQ=255)
cGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGCCCGCGCGATCGGCtt < 1:3048833/101‑1 (MQ=255)
cGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGCCCGCGCGATCGGCtt < 1:1864444/101‑1 (MQ=255)
cGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGCCCGCGCGATCGGCtt > 2:1161775/1‑101 (MQ=255)
gTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGCCCGCGCGATCGGcaga > 1:1559222/1‑98 (MQ=255)
tCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGCCCGCGCGATCGGCTTTg < 2:1894481/101‑1 (MQ=255)
|
GCAAGCCGGGGGCTCTGCCCCCGGACCCCCGGGATATTT.GAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGG..GTGAATTT.GCCGTCAGGCAAAGA.GGGG.GCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGCCCGCGCGATCGGCTTTG > NC_014034/2950659‑2950859
Base quality scores:
ATCG
< 3 ≤
ATCG
< 23 ≤
ATCG
< 30 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|