| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 3,439,791 | Δ1 bp | 2.6% | intergenic (‑94/+69) | RCAP_rcc03240 ← / ← mutB | ATPase AAA/methylmalonyl‑CoA mutase large subunit |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 3,439,791 | 0 | G→. | 2.6% | 3.8 0.0 0.0 | 154 | intergenic (‑94/+69) | RCAP_rcc03240/mutB | ATPase AAA/methylmalonyl‑CoA mutase large subunit |
| Reads supporting (aligned to +/- strand): new base (2/2): ref base (70/80): total (72/82) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.00e+00 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.00e+00 | ||||||||||
Only 100 of 215 total aligned reads displayed.
CTCATGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAG.AT.AAAG.GGGCTTTGCTTTTATC.TTTC.CCCA.AATA.TCCCGGGGGTGC..GG.GGGCAGAGCCCCCGCGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCG > NC_014034/3439693‑3439893
|
aTGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGGATTTTGGGGAAG.AA.AAAa.ggggc > 1:3447652/1‑99 (MQ=255)
aTGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAG.AT.AAAG.GGgct < 1:920583/101‑1 (MQ=255)
tGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGTCGGGGATATTTGGGGCAAG.AT.AAAG.GGgctt < 1:4213589/101‑1 (MQ=255)
ggcggcGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGGATTTTGGGGGAG.AG.AAAA.GGgcttt > 1:2443126/1‑101 (MQ=255)
ggcggcGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAG.AT.AAAG.GGgcttt < 2:1997825/101‑1 (MQ=255)
ggcggcGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAG.AT.AAAG.GGgcttt < 2:1542403/101‑1 (MQ=255)
gcgACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAG.AT.AAAG.TGgctttgctt < 2:4387799/101‑1 (MQ=255)
gcgACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAG.AT.AAAG.GGgctttgctt < 2:2285727/101‑1 (MQ=255)
cgACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGTATTTTTGGGGAG.AT.TAAG.GGgggttgtttt > 1:4409302/1‑101 (MQ=255)
cgACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGGATTTTGGGGGAG.AA.AAAA.GGgggtttcttt > 1:90332/1‑101 (MQ=255)
cgACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAG.AT.AAAG.GGgctttgcttt < 2:565451/101‑1 (MQ=255)
gACCCTACACGGCGCGATCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGTATATTTGGGGCAAT.AT.AAAG.GGGCTTTGCtttt < 2:4701140/101‑1 (MQ=255)
gACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAG.AT.AAAG.GGGCTTTGCtttt < 1:2768129/101‑1 (MQ=255)
gACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAG.AT.AAAG.GGGCTTTGCtttt < 1:3756477/101‑1 (MQ=255)
gACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAG.AT.AAAG.GGGCTTTGCtttt < 2:1467369/101‑1 (MQ=255)
aCCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAG.AT.AAAG.GGGCTTTGCTTTTa < 2:3902816/101‑1 (MQ=255)
aCCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAG.AT.AAAG.GGGCTTTGCTTTTa < 1:106417/101‑1 (MQ=255)
cccTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGGATTTTGGGGAAG.AT.AAAA.GGGCTTTTCtttttt > 1:4322022/1‑99 (MQ=255)
ccTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAG.AT.AAAG.GGGCTTTGCTTTTATc < 1:1429714/101‑1 (MQ=255)
cTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAG.AT.AAAG.GGGCTTTGCTTTTATC.t < 1:3289006/101‑1 (MQ=255)
cTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAG.AT.AAAG.GGGCTTTGCTTTTATC.t < 1:1614897/101‑1 (MQ=255)
ttcacGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAG.AT.AAAG.GGGCTTTGCTTTTATC.tt < 1:260332/99‑1 (MQ=255)
tACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGGAATTTGGGCACA.ATAAAAG.GGGGTTTCCtttttttt > 1:3052006/1‑97 (MQ=255)
acacGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGGATTTGGGGGGAG.GT.AAAA.GGGGGTTGTTTTTTTT.ttt > 1:1267356/1‑101 (MQ=255)
cacGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAG.AT.AAAG.GGGCTTTGCTTTTATC.TTTc < 1:804986/101‑1 (MQ=255)
cacGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAG.AT.AAAG.GGGCTTTGCTTTTATC.TTTc < 2:1403482/101‑1 (MQ=255)
cacGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTCCGGCCGAGGCCGCCGGCGGCGACGTTTGGGGCGAA.AA.AAAGAGGGGATTG.GTTTATC.TTTc > 1:4717750/1‑101 (MQ=255)
acGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAG.AT.AAAG.GGGCTTTGCTTTTATC.TTTc.c < 2:242329/101‑1 (MQ=255)
cGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGGATTTTGGGGAAG.AT.AAAA.GGGCGTTGCTTTTTTT.TTTt.cc > 2:272772/1‑101 (MQ=255)
ggCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAG.AT.AAAG.GGGCTTTGCTTTTATC.TTTc.ccc < 2:4184132/101‑1 (MQ=255)
ggCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAG.AT.AAAG.GGGCTTTGCTTTTATC.TTTc.ccc < 2:3361681/101‑1 (MQ=255)
ggCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAG.AT.AAAG.GGGCTTTGCTTTTATC.TTTc.ccc < 2:1898779/101‑1 (MQ=255)
gcgcGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAG.AT.AAAG.GGGCTTTGCTTTTATC.TTTC.CCCa < 1:1358401/101‑1 (MQ=255)
gcgcGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAG.AT.AAAG.GGGCTTTGCTTTTATC.TTTC.CCCa < 2:1797897/101‑1 (MQ=255)
gcgACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGGATTTTGGGGAAG.AT.AAAG.GGGGGTTGCTTTTTTC.TTTT.CCCc.aa > 2:1129551/1‑101 (MQ=255)
gcgACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAG.AT.AAAG.GGGCTTTGCTTTTATC.TTTC.CCCa.aa < 1:1851855/101‑1 (MQ=255)
gcgACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAG.AT.AAAG.GGGCTTTGCTTTTATC.TTTC.CCCa.aa < 1:435331/101‑1 (MQ=255)
cgtccAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAG.AT.AAAG.GGGCTTTGCTTTTATC.TTTC.CCCA.Aat < 2:3858745/98‑1 (MQ=255)
cgACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGAATTTTGGGCCAGAAA.AAAG.GGGTTTTTTTTTTTTT.TTTC.CCCa.aa > 2:3696712/1‑101 (MQ=255)
cgACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAG.AT.AAAG.GGGCTTTGCTTTTATC.TTTC.CCCA.Aat < 2:2765727/101‑1 (MQ=255)
cgACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAG.AT.AAAG.GGGCTTTGCTTTTATC.TTTC.CCCA.Aat < 1:3446376/101‑1 (MQ=255)
gatcagggtgcGAAGGACAGGAATTCGGTCTGCGGGCGATGCCTCCGGCGGGGATATTTGGGGCAAG.AT.AAAG.GGGATTTGCTTTTATC.TTTC.CCCA.Aata < 2:2191486/91‑1 (MQ=25)
gACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGTATTTTGGGGAAG.AT.AAAA.GGGGGTTTCTTTTTTT.tttttccacaaa > 2:3275941/1‑92 (MQ=255)
aCCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAG.AT.AAAG.GGGCTTTGCTTTTATC.TTTC.CCCA.Aata.t < 1:1020627/101‑1 (MQ=255)
cAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAG.AT.AAAG.GGGCTTTGCTTTTATC.TTTC.CCCA.AATA.Tcc < 2:4095267/101‑1 (MQ=255)
aGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAG.AT.AAAG.GGGCTTTGCTTTTATC.TTTC.CCCA.AATA.Tccc < 2:54275/101‑1 (MQ=255)
aGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAG.AT.AAAG.GGGCTTTGCTTTTATC.TTTC.CCCA.AATA.Tccc < 2:1671344/101‑1 (MQ=255)
aGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAG.AT.AAAG.GGGCTTTGCTTTTATC.TTTC.CCCA.AATA.Tccc < 1:2957052/101‑1 (MQ=255)
ttCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAG.AT.AAAG.GGGCTTTGCTTTTATC.TTTC.CCCA.AATA.TCCCgggg < 2:692218/101‑1 (MQ=255)
cGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGTATTTTGGGCAAA.AA.AAAG.GGGAGTTGCTTTTTTCTTTTC.CCCA.AAAT.TCCCggggg > 1:1573614/1‑101 (MQ=255)
cGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGGATTTTGGGGAAG.AT.AAAA.GGGGTTTGGTTTTTTT.TTTT.TCCC.GATA.TCCCcggggg > 1:2839846/1‑100 (MQ=255)
cGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGAATTTTGGGCGAG.GA.AAAA.GGGCTTTGCTTTTTTT.TTTT.CCCC.AAAA.TCCCcggggg > 2:4246556/1‑100 (MQ=255)
aaaGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGTATTTGGGGCACG.AT.AAAG.GGGCATTGCTTTTTTC.TTTC.CCCA.AAGA.TCCCCGGGGGGc > 1:2984448/1‑101 (MQ=37)
aaGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGTATTTTGGGGAAG.ATAAAAG.GGGTTTTTTTTTTTTT.TTTT.CCAA.AAAT.TCCCgggggggg > 1:4555445/1‑98 (MQ=255)
aaGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGTATTTTGGGGAAG.AT.AAAA.GGGGTTTGCTTTTTTC.TTTT.CCCA.AAAA.TCCCggggggggg > 1:4641847/1‑97 (MQ=255)
aGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGTATTTTGGGGAAG.AT.AAAA.GGGGTTTTCTTTTTTT.TTTT.CCCC.AAAA.TCCCCGGGGGGC..gg > 2:2502529/1‑101 (MQ=255)
aCAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAG.AT.AAAG.GGGCTTTGCTTTTATC.TTTC.CCCA.AATA.TCCCGGGGGTGC..gg.gg < 1:3507544/101‑1 (MQ=255)
ggAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGGATTTTGGGGAAG.AT.AAAA.GGGGTTTGCTTTTATT.TTTC.CCCC.AAAA.TTCCGGGGGGGC..GG.GGGCa > 2:2954947/1‑101 (MQ=255)
ggAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAG.AT.AAAG.GGGCTTTGCTTTTATC.TTTC.CCCA.AATA.TCCCGGGGGTGC..GG.GGGCa < 1:2013312/101‑1 (MQ=255)
ggAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAG.AT.AAAG.GGGCTTTGCTTTTATC.TTTC.CCCA.AATA.TCCCGGGGGTGC..GG.GGGCa < 2:1267265/101‑1 (MQ=255)
gAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGTATTTGGGGCGGG.AG.AAAG.GGGGTTTTTTTTTTTC.TTTT.CCCA.ACTA.TTCCCGGGGTGG..GG.GGGCag > 1:2296951/1‑101 (MQ=255)
aaTTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTTGGGGGAG.GG.AAAA.GGGGGTTGTTTTTTTT.TTTCTCCCACAATT.CCCCCGGGGGGG..gg.ggggg > 2:1646453/1‑99 (MQ=255)
aTTCGGCCTGCGGCCGATGCCTCCGGCGGGGGGATTTGGGGGAAG.AT.AAAA.GGGGTTTGGTTTTTTT.TTTT.CCCC.AATATTCCCGGGGGGGG..gg.gggggag > 1:320001/1‑97 (MQ=255)
aTTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAG.AT.AAAG.GGGCTTTGCTTTTATC.TTTC.CCCA.AATA.TCCCGGGGGTGC..GG.GGGCagag < 1:272806/101‑1 (MQ=255)
aTTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAG.AT.AAAG.GGGCTTTGCTTTTATC.TTTC.CCCA.AATA.TCCCGGGGGTGC..GG.GGGCagag < 2:258922/101‑1 (MQ=255)
cGGCCTGCGGCCGATGCCTCCGGCGGGGGTATTTTGGGGAAG.ATAAAAG.GGGTTTGGTTTTTTTT.TTTC.CCCA.AAAT.TCCCGGGGG.GC..gg.gggggggggcc > 2:4071818/1‑93 (MQ=255)
ggCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGGAAG.AT.AAAG.GGGCTTTGCTTTTATT.TTTC.CCCA.AATA.TCCCGGGGGGGC..GG.GGGGGGAGgccc > 2:2183387/1‑101 (MQ=25)
tgactttcGATGCCTCCGGCGGGGATATTTGGGGCAAG.AT.GAA..ACCCATCCCTTTCATC.TTGC.CCCA.AATA.TCCCGGGGGGCCCGGG.GGGCAGCGcccccc < 2:2970950/94‑2 (MQ=25)
cGGCCGATGCCTCCGGCGGGGATATTTGGGGGAAG.AT.AAAG.GGGGTTTGCTTTTATC.TTTC.CCCA.AATA.TCCCGGGGGGGC..GG.GGGGAGAGCCCCcgccgc > 2:2804717/1‑98 (MQ=21)
ggCCGATGCCTCCGGCGGGGATATTTGGGGGAAG.AT.AAAG.GGGGTTTGCTTTTATC.TTTT.CCCC.AATA.TCCCCGGGGTGC..GG.GGGGCGAGccccccccgcc > 2:1221718/1‑95 (MQ=25)
cGATGCCTCCGGCGGGGACATTTGGGGGAAG.AT.GAA..ACCCATCCCTTTCTTC.TTTC.CCCC.AATATTCCAGGGGGCCC..GGTGGGCAGAGcccccccccactt > 2:2913279/1‑93 (MQ=16)
gATGCCTCCGGCGGGGATATTTGGGGCAAG.AT.AAAG.GGGGTTTGCTTTTATC.TTTC.CCCA.AATA.TCCCCGGGGGGC..GG.GGGCAGAGCCCC..CGCCGCCACgg > 2:2625519/1‑101 (MQ=18)
tGCCTCCGGCGGGGATATTTGGGGCAAG.AT.AAAG.GGGCTTTGCTTTTATC.TTTC.CCCA.AATA.TCCCGGGGGTGC..GG.GGGCAGAGCCCCcgccgccccggtt > 2:2312820/1‑91 (MQ=255)
gcggGGATATTTGGGGCAAG.AT.AAAG.GGGCTTTGCTTTTATC.TTTC.CCCA.AATA.TCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCCcgccgc > 2:1286549/1‑101 (MQ=255)
gcggGGATATTTGGGGCAAG.AT.AAAG.GGGCTTTGCTTTTATC.TTTC.CCCA.AATA.TCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCAcgccgc > 1:3249207/1‑101 (MQ=255)
cggGGATATTTGGGGCAAG.AT.AAAG.GGGCTTTGCTTTTATC.TTTC.CCCA.AATA.TCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCcgcg > 2:677272/1‑101 (MQ=255)
gggATATTTGGGGCAAG.AT.AAAG.GGGCTTTGCTTTTATC.TTTC.CCCA.AATA.TCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGAc > 2:3320930/1‑101 (MQ=255)
ggATATTTGGGGCAAG.AT.AAAG.GGGCTTTGCTTTTATC.TTTC.CCCA.AATA.TCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGAcc > 1:3941347/1‑101 (MQ=255)
ggATATTTGGGGCAAG.AT.AAAG.GGGCTTTGCTTTTATC.TTTC.CCCA.AATA.TCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGAcc > 2:4303726/1‑101 (MQ=255)
atTTGGGGCAAG.AT.AAAG.GGGCTTTGCTTTTATC.TTTC.CCCA.AATA.TCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGtct > 1:2535828/1‑101 (MQ=255)
gCAAG.AT.AAAG.GGGCTTTGCTTTTATC.TTTC.CCCA.AATA.TCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCggggc > 1:3890313/1‑100 (MQ=255)
gCAAG.AT.AAAG.GGGCTTTGCTTTTATC.TTTC.CCCA.AATA.TCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGt > 1:2058238/1‑101 (MQ=255)
cAAG.AT.AAAG.GGGCTTTGCTTTTATC.TTTC.CCCA.AATA.TCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTc > 2:2796296/1‑101 (MQ=255)
cAAG.AT.AAAG.GGGCTTTGCTTTTATC.TTTC.CCCA.AATA.TCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTc > 2:3104573/1‑101 (MQ=255)
aaG.AT.AAAG.GGGCTTTGCTTTTATC.TTTC.CCCA.AATA.TCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCg > 1:1329299/1‑101 (MQ=255)
aaG.AT.AAAG.GGGCTTTGCTTTTATC.TTTC.CCCA.AATA.TCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCg > 1:1460683/1‑101 (MQ=255)
aaG.AT.AAAG.GGGCTTTGCTTTTATC.TTTC.CCCA.AATA.TCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCg > 2:1361508/1‑101 (MQ=255)
aaG.AT.AAAG.GGGCTTTGCTTTTATC.TTTC.CCCA.AATA.TCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCg > 1:2398964/1‑101 (MQ=255)
aG.AT.AAAG.GGGCTTTGCTTTTATC.TTTC.CCCA.AATA.TCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGc > 2:3502780/1‑101 (MQ=255)
aT.AAAG.GGGCTTTGCTTTTATC.TTTC.CCCA.AATA.TCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCa > 1:611880/1‑101 (MQ=255)
aT.AAAG.GGGCTTTGCTTTTATC.TTTC.CCCA.AATA.TCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCa > 1:1833567/1‑101 (MQ=255)
aT.AAAG.GGGCTTTGCTTTTATC.TTTC.CCCA.AATA.TCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCa > 2:652420/1‑101 (MQ=255)
t.AAAG.GGGCTTTGCTTTTATC.TTTC.CCCA.AATA.TCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAg > 2:3608486/1‑101 (MQ=255)
t.AAAG.GGGCTTTGCTTTTATC.TTTC.CCCA.AATA.TCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGCCGCCAg > 2:1708134/1‑101 (MQ=255)
aaaG.TGGCTTTGCTTTTATC.TTTC.CCCA.AATA.TCCCGGGGGGGC..GG.GGGCAGAGACTC..CGCCGCCACGGTTCACGCCGCGACCGCCTCCGGGGTCGCCAgc > 2:4017047/1‑101 (MQ=37)
aaaG.GGGCTTTGCTTTTATC.TTTC.CCCA.AATA.TCCTGGTGGCAC..CG.GGACAGAGCCCCCG.G.CGCCCCGGCTCACGCCGCGACCGCCTCCAGAGACGCCAgc > 1:796877/1‑101 (MQ=255)
aaaG.GGGCTTTGCTTTTATC.TTTC.CCCA.AATA.TCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAgc > 1:2939268/1‑101 (MQ=255)
aaG.GGGCTTTGCTTTTATC.TTTC.CCCA.AATA.TCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAgcg > 2:442266/1‑101 (MQ=255)
aaG.GGGCTTTGCTTTTATC.TTTC.CCCA.AATA.TCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAgcg > 2:3770490/1‑101 (MQ=255)
aaG.AGGCTTTGCTTTTATC.TTTC.CCCA.AATA.TCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAgcg > 2:4022928/1‑101 (MQ=255)
|
CTCATGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAG.AT.AAAG.GGGCTTTGCTTTTATC.TTTC.CCCA.AATA.TCCCGGGGGTGC..GG.GGGCAGAGCCCCCGCGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCG > NC_014034/3439693‑3439893
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 30 ≤
ATCG
< 35 ≤
ATCG
< 41 ≤
ATCG
|