| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 826,038 | Δ1 bp | 4.0% | coding (410/672 nt) | thiN → | thiamine pyrophosphokinase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 826,038 | 0 | C→. | 4.0% | 14.2 ‑0.3 ‑0.5 | 174 | coding (410/672 nt) | thiN | thiamine pyrophosphokinase |
| Reads supporting (aligned to +/- strand): new base (4/3): ref base (82/85): total (86/88) | ||||||||||
| Fisher's exact test strand distribution p-value = 7.19e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 3.21e-01 | ||||||||||
Only 100 of 218 total aligned reads displayed.
GGGCTGCGGCTTGATCACACGCTGGCGGCGCTGACCGAACTGACCACGCGGCCCGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGCTGGCGCTGGATCTGCCCTTGGGCACGCGGCTGTCGCTGCATCCGATGGGACCGGC.TTCCGGGCGCTCGACCGGGCTGCGCTGGCCGATC > NC_014034/825938‑826138
|
ggCTGCGGCTTGATCACACGCTGGCGGCGCTGACCGAACTGACCACGCGGCCCGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.cc < 2:1929704/101‑1 (MQ=255)
gCTGCGGCTTGATCACACGCTGGCGGCGCTGACCGAACTGACCACGCGGCCCGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.ccc < 1:3714895/101‑1 (MQ=255)
tGCGGCTTGATCACACGCTGGCGGCGCTGACCGAACTGACCACGCGGCCCGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.ccccc < 1:1088405/101‑1 (MQ=255)
tGCGGCTTGATCACACGCTGGCGGCGCTGACCGAACTGACCACGCGGCCCGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.ccccc < 1:870451/101‑1 (MQ=255)
tGCGGCTTGATCACACGCTGGCGGCGCTGACCGAACTGACCACGCGGCCCGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.ccccc < 2:355713/101‑1 (MQ=255)
gCGGCTTGATCACACGCTGGCGGCGCTGACCGAACTGACCACGCGGCCCGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.cccccc > 1:3904200/1‑101 (MQ=255)
gCTTGATCACCCGCTGGCGGCGCTGACCGAACTGACCACGCGGCCCGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.ccccccccc < 1:534834/101‑1 (MQ=255)
gCTTGATCACACGCTGGCGGCGCTGACCGAACTGACCTCGCGGCCCGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.ccccccccc < 1:3305800/101‑1 (MQ=255)
gCTTGATCACACGCGGGCGGCGCTGACCGAACTGACCACGCGGCCCGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.ccccccccc < 2:1746825/101‑1 (MQ=255)
cTTGATCACACGCTGGCGGCGCTGACCGAACTGACCGCGCGGCCCGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCg < 2:569572/101‑1 (MQ=255)
cTTGATCACACGCTGGCGGCGCTGACCGAACTGACCACGCGGCCCGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCg < 1:2464428/101‑1 (MQ=255)
ttGATCACACGCTGGCGGCGCTGACCGAACTGACCACGCGGCCCGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCgg > 2:2436222/1‑101 (MQ=255)
ttGATCACACGCTGGCGGCGCTGACCGAACTGACCACGCGGCCCGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCgg > 1:4371510/1‑101 (MQ=255)
ttGATCACACGCTGGCGGCGCTGACCGAACTGACCACGCGGCCCGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCgg < 1:2590522/101‑1 (MQ=255)
tGATCACACGCTGGCGGCGCTGACCGAACTGACCACGCGGCCCGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGc > 1:3972919/1‑101 (MQ=255)
gATCACACGCTGGCGGCGCTGACCGAACTGACCACGCGGCCCGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGcg > 1:1236452/1‑100 (MQ=255)
gATCACACGCTGGCGGCGCTGACCGAACTGACCACGCGGCCCGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGCt < 1:2786497/101‑1 (MQ=255)
aTCACACGCTGGCGGCGCTGACCGAACTGACCACGCGGCCCGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGCTg > 1:2737042/1‑101 (MQ=255)
cacccacTGGCGGCGCTGACCGAACTGGCCACGCGGCCCGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGCTGgc < 2:3893730/95‑1 (MQ=255)
cacGCTGGCGGCGCTGACCGAACTGACCACTCGGCCCGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGCTGgcgc > 1:1663704/1‑101 (MQ=255)
ccGCTGGCGGCGCTGACCGAACTGGCCACGCGGCCCGGGCAGAGCGTGATCCTGACCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGCTGGCGCt < 2:3956622/100‑1 (MQ=255)
gCTGGCGGCGCTGACCGAACTGACCACGCGGCCCGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGCTGGCGCTgg > 2:2979283/1‑101 (MQ=255)
gCTGGCGGCGCTGACCGAACTGACCACGCGGCCCGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGCTGGCGCTgg > 1:2390470/1‑101 (MQ=255)
cTGGCGGCGCTGACCGAACTGACCACGCGGCCCGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGCTGGCGCTGGa < 1:2893281/101‑1 (MQ=255)
ggcggcGCTGACCGAACTGACCACGCGGCCCGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGCTGGCGCCGGATc > 2:2618870/1‑101 (MQ=255)
gcggcgCTGACCGAACTGACCACGCGGCCCGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGCTGGCGCTGGATCt < 1:3111288/101‑1 (MQ=255)
cggcgCTGACCGAACTGACCACGCGGCCCGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGCTGGCGCTGGATCTg > 2:4065904/1‑101 (MQ=255)
cggcgCTGACCGAACTGACCACGCGGCCCGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGCTGGCGCTGGATCTg < 2:628095/101‑1 (MQ=255)
cggcgCTGACCGAACTGACCACGCGGCCCGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGCTGGCGCTGGATCTg > 1:1834428/1‑101 (MQ=255)
gcgcTGACCGAACTGACCACGCGGCCCGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGCTGGCGCTGGATCTGcc > 2:1341274/1‑101 (MQ=255)
cgcTGACCGAACTGACCACGCGGCCCGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCGCCCCCCCCCCCGCTGGCGCTGGATCTGcc > 1:3827842/1‑101 (MQ=255)
cgcTGACCGAACTGACCACGCGGCCCGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGCTGGCGCTGGATCTGccc < 2:3528575/101‑1 (MQ=255)
gcTGACCGAACTGACCACGCGGCCCGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGCTGGCGCTGGATCTGCCCt < 1:3490860/101‑1 (MQ=255)
cTGACCGAACTGACCACGCGGCCCGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGCTGGCGCTGGATCTGCCCtt < 2:2293668/101‑1 (MQ=255)
cTGACCGAACTGACCACGCGGCCCGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGCTGGCGCTGGATCTGCCCtt < 2:4730051/101‑1 (MQ=255)
gACCGAACTGACCACGCGGCCCGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATTTTTCGCG.CCCCCCCCCCGCTGGCGCTGGATCCGCCCTTgg > 1:4687396/1‑101 (MQ=255)
aCCGAACTGACCACGCGGCCCGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGCTGGCGCTGGATCTGCCCTTggg < 1:3357778/101‑1 (MQ=255)
aCCGAACTGACCACGCGGCCCGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGCTGGCGCTGGATCTGCCCTTggg < 1:176652/101‑1 (MQ=255)
ccGAACTGGCCACGCGGCCCGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGCTGGCGCTGGATCTGCCCTTGGGc < 1:1414248/101‑1 (MQ=255)
ccGAACTGACCACGCGGCCCGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGCTGGCGCTGGATCTGCCCTTGGGc < 2:147352/101‑1 (MQ=255)
cGAACTGACCACGCGGCCCGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGCTGGCGCTGGATCTGCCCTTGGGCa < 2:1747874/101‑1 (MQ=255)
gAACTGACCACGCGGCCCGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGCTGGCGCTGGATCTGCCCTTGGGCAc > 1:1304615/1‑101 (MQ=255)
gAACTGACCACGCGGCCCGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGCTGGCGCTGGATCTGCCCTTGGGCAc < 2:1504158/101‑1 (MQ=255)
gAACTGACCACGCGGCCCGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGCTGGCGCTGGATCTGCCCTGGGGCAc < 2:191056/101‑1 (MQ=255)
tGACCACGCGGCCCGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGCTGGCGCTGGATCTGCCCTTGGGCACGCgg < 2:3712880/101‑1 (MQ=255)
gACCACGCGGCCCGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGCTGGCGCTGGATCTGCCCTTGGGCACGCGGc > 1:1528325/1‑101 (MQ=255)
cccACCCGGCCCGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGCTGGCGCTGGATCTGCCCTTGGGCACGCGGCt < 1:4514508/100‑1 (MQ=255)
aCCACGCGGCCCGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGCTGGCGCTGGATCTGCCCTTGGGCACGCGGCt < 2:4687140/101‑1 (MQ=255)
aCGCGGCCCGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGCTGGCGCTGGATCTGCCCTTGGGCACGCGGCTGTc > 2:3314314/1‑101 (MQ=255)
cgcgGCCCGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGCTGGCGCTGGATCTGCCCTTGGGCACGCGGCTGTCg < 2:1645926/101‑1 (MQ=255)
cgGCCCGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGCTGGCGCTGGATCTGCCCTTGGGCACGCGGCTGTCGCt < 2:4371263/101‑1 (MQ=255)
ggCCCGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGCTGGCGCTGGATCTGCCCTTGGGCACGCGGCTGTCGCTg > 2:4296403/1‑101 (MQ=255)
ggCCCGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGCTGGCGCTGGATCTGCCCTTGGGCACGCGGCTGTCGCTg > 1:2261639/1‑101 (MQ=255)
ccGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGCTGGCGCTGGATCTGCCCTTGGGCACGCGGCTGTCGCTGCAt < 2:3257758/101‑1 (MQ=255)
ccGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG..CCCCCCCCGGCTGGCGCTGGATCTGCCCTTGGGCACGCGGCTGTCGCTGCATc > 2:2745108/1‑101 (MQ=255)
cGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGCAGGATCTGGATCGGCACTTGGGCACGCGGCGGTCGCtcaatc > 2:1140736/1‑96 (MQ=255)
gggCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGCTGGCGCTGGATCTGCCCTTGGGCACGCGGCTGTCGCTGCATcc < 2:3856061/101‑1 (MQ=255)
gggCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGCTGGCGCTGGATCTGCCCTTGGGCACGCGGCTGTCGCTGCATcc < 1:319993/101‑1 (MQ=255)
ggCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGCTGGCGCTGGATCTGCCCTTGGGCACGCGGCTGTCGCTGCATCCg < 2:1435735/101‑1 (MQ=255)
ggCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCCGCGGGCGCTGGATCTGCCCTTGGGCACGAGGCGGTCGCGGCGTCCg > 2:4266374/1‑101 (MQ=255)
gCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGCTGGCGCTGGATCTGCCCTTGGGCACGCGGCTGTCGCTGCATcatt < 2:669290/101‑4 (MQ=255)
cAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGCTGGCGCTGGATCTGCCCTTGGGCACGCGGCTGTCGCTGCATCCGAt < 2:268784/101‑1 (MQ=255)
gATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGCTGGCGCTGGATCTGCCCTTGGGCACGCGGCTGTCGCTGCATCCGATgg < 1:252223/101‑1 (MQ=255)
gATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGCTGGCACTGGATCTGCCCTTGGGCACGCGGCTGGCGCTGCATCCGATgg > 2:3322380/1‑101 (MQ=255)
cGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGCTGGCGCTGGATCTGCCCTTGGGCACGCGGCTGTCGCTGCATCCGATGGGAc > 1:2447384/1‑101 (MQ=255)
cGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCCGGTGGGCCTGGATGTGCCCCTGGGCACGGGGCCGTCCCTGGATCCCATGGGAc > 2:4635752/1‑101 (MQ=255)
cGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG..CCCCCCCCGGCTGGCGCTGGATCTGCCCTTGGGCACGCGGCTGTCGCTGCATCCGATGGGAcc > 2:1709823/1‑101 (MQ=255)
gTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGCTGGCGCTGGATCTGCCCTTGGGCACGCGGCTGTCGCTGCATCCGATGGGAcc < 2:454922/101‑1 (MQ=255)
aTCCTGATCGCCGAGGACGAGGTGATCTTTCGCG..CCCCCCCCGGCTGGCGCTGGATCTGCCCTTGGGCACGCGGCTGTCGCTGCATCCGATGGGACCGGC.t > 2:4153852/1‑101 (MQ=255)
tCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGCTGGCGCTGGATCTGCCCTTGGGCACGCGGCTGTCGCTGCATCCGATGGGACCGGC.t < 2:1240639/101‑1 (MQ=255)
gCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGCTGGCGCTGGATCTGCCCTTGGGCACGCGGCTGTCGCTGCATCCGATGGGACCGGC.TTCCcgggg > 2:2467669/1‑99 (MQ=255)
cGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGCTTGCGCTGGATCTGTCCTTCGGCACGCCGCTGTCGCTGGGTCCGATGGGACCGGC.GTCCGGGGGCt > 2:2941045/1‑101 (MQ=255)
gAGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGCTGGCGCTGGATCTGCCCTTGGGCACGCGGCTGTCGCTGCATCCGATGGGACCGGCTTTCCGGgggcc > 2:3733311/1‑100 (MQ=255)
gAGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGCTGGCGCTGGATCTGCCCTTGGGCACGCGGCTGTCGCTGCATCCGATGGGACCGGC.TTCCGGGCGCTc > 1:4654360/1‑101 (MQ=255)
gggACGAGGTGATCTTTCGCG.CCCCCCCCCGGCTGGCGCTGGATCTGCCCTTGGGCACGCGGCTGTCGCTGCATCCGATGGGACCGGC.TTCCGGGCGCTCg < 2:1580102/100‑1 (MQ=255)
aGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGCTGGCGCTGGATCTGCCCTTGGGCACGCGGCTGTCGCTGCATCCGATGGGACCGGC.TTTCGGGGGCCCg > 2:1188666/1‑101 (MQ=255)
ggACGAGGTGATCTTTCGCG..CCCCCCCCGGCTGGCGCTGGATCTGCCCTTGGGCACGCGGCTGTCGCTGCATCCGATGGGACCGGC.TTCCGGGCGCTCGAc < 1:4154098/101‑1 (MQ=255)
gACGAGGTGATCTTTCGCG.CCCCCCCCCGGCTGGCGCTGGATCTGCCCTTGGGCACGCGGCTGTCGCTGCATCCGATGGGACCGGC.TTCCGGGCGCTCGAc < 1:710684/101‑1 (MQ=255)
gACGAGGTGATCTTTCGCG.CCCCCCCCCGGCTGGCGCTGGATCTGCCCTTGGGCACGCGGCTGTCGCTGCATCCGATGGGACCGGC.TTCCGGGCGCCCGAc > 2:201214/1‑101 (MQ=255)
aCGAGGTGATCTTTCGCG.CCCCCCCCCGGCCGGCGCCGGATCTGCCCTTGGGCACGCGGCTGTCGCTGCCTCCGGTGGGACCGGG.TTTCCGgcgccccccc > 1:3343483/1‑95 (MQ=255)
gAGGTGATCTTTCGCG.CCCCCCCCCGGCTGGCGCTGGATCTGCCCTTGGGCACGCGGCTGTCGCTGCATCCGATGGGACCGGC.TTTCTGGGGCTTGAcccg > 1:4214546/1‑99 (MQ=255)
aGGTGATCTTTCGCG.CCCCCCCCCGGCTGGCGCTGGATCTGCCCTTGGGCACGCGGCTGTCGCTGCATCCGATGGGACCGGC.TTCCGGGCGCTCGACCggg < 1:2978362/101‑1 (MQ=255)
gATCTTTCGCG.CCCCCCCCCGGCTGGCGCTGGATCTGCCCTTGGGCACGCGGCTGTCGCTGCATCCGATGGGACCGGC.TTCCGGGGGCTCGCCCGGGCCgc > 1:559831/1‑101 (MQ=255)
gATCTTTCGCG.CCCCCCCCCGGCTGGCGCTGGATCTGCCCTTGGGCACGCGGCTGTCGCTGCATCCGATGGGACCGGC.TTCCGGGCGCTCGACCGGGCTgc < 1:1191860/101‑1 (MQ=255)
cTTTCGCG.CCCCCCCCCGGCTGGCGCTGGATCTGCCCTTGGGCACGCGGCTGTCGCTGCATCCGATGGGACCGGC.TTCCGGGCGCTCGACCGGGCTGCGCt < 1:4356100/101‑1 (MQ=255)
cTTTCGCG..CCCCCCCCGGCTGGCGCTGGATCTGCCCTTGGGCACGCGGCTGTCGCTGCATCCGATGGGACCGGC.TTCCGGGCGCTCGACCGGGCTgcgccg > 1:3982392/1‑99 (MQ=255)
tttCGCG.CCCCCCCCCGGCTGGCGCTGGATCTGCCCTTGGGCACGCGGCTGTCGCTGCATCCGATGGGACCGGC.TTCTGGGCGCTCGACCGGGCTGCGCTg > 1:4465888/1‑101 (MQ=255)
tttCGCG.CCCCCCCCCGGCTGGCGCTGGATCTGCCCTTGGGCACGCGGCTGTCGCTGCATCCGATGGGACCGGC.TTCCGGGGGCTCGACCGGGCTGCCCTg > 2:1842420/1‑101 (MQ=255)
tttCGCG.CCCCCCCCCGGCTGGCGCTGGATCTGCCCTTGGGCACGCGGCTGTCGCTGCATCCGATGGGACCGGC.TTCCGGGCGCTCGACCGGGCTGCGCTg < 2:3772949/101‑1 (MQ=255)
tttCGCG.CCCCCCCCCGGCTGGCGCTGGATCTGCCCTTGGGCACGCGGCTGTCGCTGCATCCGATGGGACCGGC.TTCCGGGCGCTCCCCCGGGCTgcgccg > 2:3208457/1‑99 (MQ=255)
tttCGCG.CCCCCCCCCGGCTGGCGCTGGATCTGCCCTTGGGCACGCGGCTGTCGCTGCATCCGATGGGACCGGC.TTCCCGGCCCTCGGCCGGGCTggggtg > 2:2184232/1‑96 (MQ=255)
tCGCG.CCCCCCCCCGGCTGGCGCTGGATCTGCCCTTGGGCACGCGGCTGTCGCTGCATCCGATGGGACCGGC.TTCCGGGCGCTCGACCGGGCTGCGCTGGc < 1:4253697/101‑1 (MQ=255)
cgcg.CCCCCCCCCGGCTGGCGCTGGATCTGCCCTTGGGCACGCGGCTGTCGCTGCATCCGATGGGACCGGC.TTCCGGGCGCTCGACCGGGCTGCGCTGGcc < 1:189522/101‑1 (MQ=255)
cgcg.CCCCCCCCCGGCTGGCGCTGGATCTGCCCTTGGGCACGCGGCTGTCGCTGCATCCGATGGGACCGGC.TTCCGGGCGCTCGACCGGGCGGCGCTGGcc > 1:1415294/1‑101 (MQ=255)
cgcg.CCCCCCCCCGGCTGGCGCTGGATCTGCCCTTGGGCACGCGGCTGTCGCTGCATCCGATGGGACCGGC.TTCCGGGCGCTCGACCCGGCTGCGCTGGcc > 2:2552807/1‑101 (MQ=255)
cgcg.CCCCCCCCCGGCTGGCGCTGGATCTGCCCTTGGGCACGCGGCTGTCGCTGCATCCGATGGGACCGGC.TTCCCGGGGCTCGACCGGGCTGCGCTGGcc > 2:3153171/1‑101 (MQ=255)
g.cCCCCCCCCGGCTGGCGCTGGATCTGCCCTTGGGCACGCGGCTGTCGCTGCATCCGATGGGACCGGC.TTCCGGGCGCTCGCCCGGGGTGCGCGGGCCGag > 2:433011/1‑100 (MQ=255)
g.cCCCCCCCCGGCTGGCGCTGGATCTGCCCTTGGGCACGCGGCTGTCGCTGCATCCGATGGGACCGGC.TTCCGGGCGCTCGACCGGGCTGCGCTGGCCGAt < 2:2380135/101‑1 (MQ=255)
ccccccccccGGCTGGCGCTGGATCTGCCCTTGGGCACGCGGCTGTCGCTGCATCCGATGGGACCGGC.TTCCGGGCGCTCGACCGGGCTGCGCTGGCCGAt < 2:3972677/100‑1 (MQ=255)
cccccccccGGCTGGCGCTGGATCTGCCCTTGGGCACGCGGCTGTCGCTGCATCCGATGGGACCGGC.TTCCGGGCGCTCGACCGGGCTGCGCTGGCCGATc < 2:1377447/101‑1 (MQ=255)
|
GGGCTGCGGCTTGATCACACGCTGGCGGCGCTGACCGAACTGACCACGCGGCCCGGGCAGATCGTGATCCTGATCGCCGAGGACGAGGTGATCTTTCGCG.CCCCCCCCCGGCTGGCGCTGGATCTGCCCTTGGGCACGCGGCTGTCGCTGCATCCGATGGGACCGGC.TTCCGGGCGCTCGACCGGGCTGCGCTGGCCGATC > NC_014034/825938‑826138
Base quality scores:
ATCG
< 3 ≤
ATCG
< 19 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|