| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,200,794 | +G | 100% | intergenic (+3/‑114) | trpF → / → trpB1 | phosphoribosylanthranilate isomerase/tryptophan synthase subunit beta |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,200,794 | 1 | .→G | 100.0% | 108.7 | 193 | intergenic (+3/‑114) | trpF/trpB1 | phosphoribosylanthranilate isomerase/tryptophan synthase subunit beta |
| Reads supporting (aligned to +/- strand): new base (19/139): ref base (31/4): total (50/143) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.44e-18 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 4.02e-12 | ||||||||||
Only 100 of 230 total aligned reads displayed.
GGGCGGCTCAGGTCGACGTGTCGTCGGGGGTGGAATCGGCGCCCGGGGTCAAGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTA...GG.GT.GGGG.TTTCACCCCCACACCCCCAGCGTATTTTGGCCAAGAAGAAACAGGAACTTT.ACCCCGA.GGGGGGGGCGCGCTATCTGCTGTTGGCGCGTGA > NC_014034/1200694‑1200889
|
gggCGGCTCAGGTCGACGTGTCGTCGGGGGTGGAATCGGCGCCCGGGGTCAAGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTC...GG.Gt < 2:4016725/101‑1 (MQ=255)
gcTCAGGTCGACGTGTCGTCGGGGGTGGAATCGGCGCCCGGGGTCAAGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTA...GG.GG.ggggg > 1:1667046/1‑100 (MQ=255)
cTCAGGTCGACGTGTCGTCGGGGGTGGAATCGGCGCCCGGGGTCAAGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCGGGGGCA...GG.GG.gggggg > 1:1275247/1‑99 (MQ=255)
cTCAGGTCGACGTGTCGTCGGGGGTGGAATCGGCGCCCGGGGTCAAGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTA...GG.GT.gggggt < 1:2346278/101‑3 (MQ=255)
cTCAGGTCGACGTGTCGTCGGGGGTGGAATCGGCGCCCGGGGTCAAGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTA...GG.GG.gggggg > 2:1660597/1‑99 (MQ=255)
tCAGGTCGACGTGTCGTCGGGGGTGGAATCGGCGCCCGGGGTCAAGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGGA...GG.GG.ggggggg > 1:4411180/1‑98 (MQ=255)
cAGGTCGACGTGTCGTCGGGGGTGGAATCGGCGCCCGGGGTCAAGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTA...GG.GT.GGGG.gttt < 1:3087421/101‑2 (MQ=255)
cAGGTCGACGTGTCGTCGGGGGTGGAATCGGCGCCCGGGGTCAAGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTA...GG.GG.gggggggg > 1:114732/1‑97 (MQ=255)
ggTCGACGTGTCGTCGGGGGTGGAATCGGCGCCCGGGGTCAAGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTA...GG.GTGGGGG.TTTca < 1:2268334/101‑1 (MQ=255)
tCGACGTGTCGTCGGGGGTGGAATCGGCGCCCGGGGTCAAGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTA...GG.GTGGGGG.TTTcacc < 1:393502/101‑1 (MQ=255)
tCGACGTGTCGTCGGGGGTGGAATCGGCGCCCGGGGTCAAGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTA...GG.GTGGGGG.TTTcacc < 1:2781569/101‑1 (MQ=255)
cGACGTGTCGTCGGGGGTGGAATCGGCGCCCGGGGTCAAGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCCGGGGTA...GGCGG.GGGG.TTTcaccc > 2:3112233/1‑101 (MQ=255)
gACGTGTCGTCGGGGGTGGAATCGGCGCCCGGGGTCAAGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTA...GG.GG.gggggggttccccc > 1:1629672/1‑91 (MQ=255)
cGTGTCGTCGGGGGTGGAATCGGCGCCCGGGGTCAAGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTA...GG.GTGGGGG.TTTcaccccca < 2:4217131/101‑1 (MQ=255)
cGTGTCGTCGGGGGTGGAATCGGCGCCCGGGGTCAAGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTA...GG.GTGGGGG.TTTcaccccca < 1:783710/101‑1 (MQ=255)
cGTGTCGTCGGGGGTGGAATCGGCGCCCGGGGTCAAGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTA...GG.GTGGGGG.TTTcaccccca < 1:4112149/101‑1 (MQ=255)
gtcgtcGGGGGTGGAATCGGCGCCCGGGGTCAAGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTA...GG.GTGGGGG.TTTcacccccacac < 2:3431985/101‑1 (MQ=255)
tcgtcgGGGGTGGAATCGGCGCCCGGGGTCAAGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTA...GG.GTGGGGG.TTTcacccccacacc < 2:3015951/101‑1 (MQ=255)
gcgtcgGGGGTGGAATCGGCGCCCGGGGTCAAGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTA...GG.GTGGGGG.TTTcacccccacacc < 2:1178676/100‑1 (MQ=255)
cgtcgGGGGTGGAATCGGCGCCCGTGGTCAAGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTA...GG.GTGGGGG.TTTcacccccacaccc < 2:2801846/101‑1 (MQ=255)
cgtcgGGGGTGGAATCGGCGCCCGGGGTCAAGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTA...GG.GTGGGGG.TTTcacccccacaccc < 1:1886954/101‑1 (MQ=255)
cgtcgGGGGTGGAATCGGCGCCCGGGGTCAAGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGGAG..GG.GG.GGGG.GTTcacccccccaccc > 2:3686932/1‑101 (MQ=255)
gtcgGGGGTGGAATCGGCGCCCGGGGTCAAGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTAG..GG.GG.GGGG.GTTcagccccacacccc > 2:1591106/1‑101 (MQ=255)
gtcgGGGGTGGAATCGGCGCCCGGGGTCAAGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTAG..GG.GG.GGGG.GTTcacccccacacccc > 1:3101700/1‑101 (MQ=255)
cgGGGGTGGAATCGGCGCCCGGGGTCAAGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTAG..GG.GG.GGGG.GTTcacccccacacccccc > 1:1941913/1‑100 (MQ=255)
cgGGGGTGGAATCGGCGCCCGGGGTCAAGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTA...GG.GTGGGGG.TTTcacccccacaccccca < 2:885435/101‑1 (MQ=255)
cgGGGGTGGAATCGGCGCCCGGGGTCAAGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTA...GG.GTGGGGG.TTTcacccccacaccccca < 2:49439/101‑1 (MQ=255)
gggggTGGAATCGGCGCCCGGGGTCAAGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTAG..GG.GG.GGGG.GTTtccccccccaccccccg > 2:71100/1‑99 (MQ=255)
ggggTGGAATCGGCGCCCGGGGTCAAGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTA...GG.GTGGGGG.TTTCACCCCCACACCCCCAGc < 2:4655673/101‑1 (MQ=255)
ggggTGGAATCGGCGCCCGGGGTCAAGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTA...GG.GTGGGGG.TTTCACCCCCACACCCCCAGc < 2:4388793/101‑1 (MQ=255)
ggggTGGAATCGGCGCCCGGGGTCAAGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTA...GG.GTGGGGG.TTTCACCCCCACACCCCCAGc < 1:4721730/101‑1 (MQ=255)
ggggTGGAATCGGCGCCCGGGGTCAAGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTA...GG.GTGGGGG.TTTCACCCCCACACCCCCAGc < 1:4521468/101‑1 (MQ=255)
gggTGGAATCGGCGCCCGGGGTCAAGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTA...GG.GTGGGGG.TTTCACCCCCACACCCCCAGCg < 2:2875010/101‑1 (MQ=255)
ggTGGAATCGGCGCCCGGGGTCAAGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTAG..GG.GG.GGGG.GTTCAACCCCACACCCCCCGCga > 1:3069207/1‑100 (MQ=255)
ggTGGAATCGGCGCCCGGGGTCAAGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTA...GG.GTGGGGG.TTTCACCCCCACACCCCCAGCGt < 2:1028609/101‑1 (MQ=255)
ggTGGAATCGGCGCCCGGGGTCAAGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGAAGGGGTAG..GG.GG.GGGG.TTTCAACCACCCCCCCCCCGCgg > 1:652626/1‑100 (MQ=255)
tGGAATCGGCGCCCGGGGTCAAGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTA...GG.GTGGGGG.TTTCACCCCCACACCCCCAGCGTAt < 1:3669291/101‑1 (MQ=255)
gAATCGGCGCCCGGGGTCAAGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTAG..GG.GG.GGGG.GTTCACCCCCACACCCCCAGCGGAttt > 2:305774/1‑101 (MQ=255)
gAATCGGCGCCCGGGGTCAAGGAGGCCGCCCGGATTGCCGCCGTTGTCGCGGCGGCGCAGGGGTAG..GG.GG.GGGG.GGTCACCCCCCCCCCCCCCCCGCAttt > 2:2425779/1‑101 (MQ=255)
aaTCGGCGCCCGGGGTCAAGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTA...GG.GTGGGGG.TTTCACCCCCACACCCCCAGCGTAtttt < 2:806736/101‑1 (MQ=255)
aaTCGGCGCCCGGGGTCAAGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTA...GG.GTGGGGG.TTTCACCCCCACACCCCCAGCGTAtttt < 1:3180789/101‑1 (MQ=255)
aaTCGGCGCCCGGGGTCAAGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTA...GG.GTGGGGG.TTTCACCCCCACACCCCCAGCGTAtttt < 1:2394074/101‑1 (MQ=255)
aTCGGCGCCCGGGGTCAAGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTAG..GG.GG.GGGG.GTTCACCCCCACACCCCCACCGTGTTTTg > 2:2070383/1‑101 (MQ=255)
aTCGGCGCCCGGGGTCAAGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTA...GG.GTGGGGG.TTTCACCCCCACACCCCCAGCGTATTTTg < 1:3882334/101‑1 (MQ=255)
tCGGCGCCCGGGGTCAAGGAGGCCGCCCGGATTGCTGCCTTTGTCGCGGCGGCGCAGGGGTA...GG.GTGGGGG.TTTCACCCCCACACCCCCAGCGTATTTTgg < 2:3964219/101‑1 (MQ=255)
tCGGCGCCCGGGGTCAAGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTAG..GG.GG.GGGG.GTTCACCCCCACACCCCCAGCGTATTTTgg > 2:3617517/1‑101 (MQ=255)
cGGCGCCCGGGGTCAAGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTA...GG.GTGGGGG.TTTCACCCCCACACCCCCAGCGTATTTTGGc < 1:4674222/101‑1 (MQ=255)
ggCGCCCGGGGTCAAGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTA...GG.GTGGGGG.TTTCACCCCCACACCCCCAGCGTATTTTGGcc < 2:4410930/101‑1 (MQ=255)
gcCCGGGGTCAAGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTAG..GG.GG.GGGG.GTTCCCCCCCCCACCCCCCGCGGATTTTGGCCaaa > 1:4209876/1‑100 (MQ=255)
cccGGGGTCAAGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTA...GG.GTGGGGG.TTTCACCCCCACACCCCCAGCGTATTTTGGCCaaga < 1:2554311/101‑1 (MQ=255)
cGGGGTCAAGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTA...GG.GTGGGGG.TTTCACCCCCACACCCCCAGCGTATTTTGGCCaagaag < 2:3344956/101‑1 (MQ=255)
ggggTCAAGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTAG..GG.GG.GGGG.GTTCACCCCCACACCCCCAGCGTATTTTGGCCAagaaga > 1:2178040/1‑101 (MQ=255)
gTCAAGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTAG..GG.GG.GGGG.GTTTACCCCCCCCCCCCCAGCGTATTTTGGGCAAGAAGaaaa > 2:1396771/1‑100 (MQ=255)
tCAAGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTA...GG.GTGGGGG.TTTCACCCCCACACCCCCAGCGTATTTTGGCCAAGAAGAAACa < 2:4297373/101‑1 (MQ=255)
aaGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTA...GG.GTGGGGG.TTTCACCCCCACACCCCCAGCGTATTTTGGCCAAGAAGAAACAgg < 1:3453018/101‑1 (MQ=255)
aaGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTA...GG.GTGGGGG.TTTCACCCCCACACCCCCAGCGTATTTTGGCCAAGAAGAAACAgg < 1:4599806/101‑1 (MQ=255)
aggaggCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTAG..GG.GG.GGGG.GTTTACCCCCACCCCCCCCCCCCACTTTGGCCAAGAAAAAACAAGa > 2:3514677/1‑101 (MQ=255)
aggaggCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTA...GG.GTGGGGG.TTTCACCCCCACACCCCCAGCGTATTTTGGCCAAGAAGAAACAGGa < 1:1927812/101‑1 (MQ=255)
ggaggCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTA...GG.GTGGGGG.TTTCACCCCCACACCCCCAGCGTATTTTGGCCAAGAAGAAACAGGaa < 1:4339647/101‑1 (MQ=255)
ggaggCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTA...GG.GTGGGGG.TTTCACCCCCACACCCCCAGCGTATTTTGGCCAAGAAGAAACAGGaa < 2:2177916/101‑1 (MQ=255)
gaggCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTAG..GG.GG.GGGG.GTTCACCCCCCCACCCCCCGCGGATTTTGGCCAAGAAGAAACAGGAAc > 1:2676801/1‑101 (MQ=255)
gaggCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTAG..GG.GG.GGGG.GTTCACCCCCACACCCCCAGCGTATTTTGGCCAAGAAGAAACAGGAAc > 1:4446354/1‑101 (MQ=255)
ggCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTA...GG.GTGGGGG.TTTCACCCCCACACCCCCAGCGTATTTTTGCCAAGAAGAAACAGGAACtt < 2:391421/101‑1 (MQ=255)
ggCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTA...GG.GTGGGGG.TTTCACCCCCACACCCCCAGCGTATTTTGGCCAAGAAGAAACAGGAACtt < 2:3206475/101‑1 (MQ=255)
gccgccCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTA...GG.GTGGGGG.TTTCACCCCCACACCCCCAGCGTATTTTGGCCAAGAAGAAACAGGAACttt < 1:3836718/101‑1 (MQ=255)
gccgccCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTA...GG.GTGGGGG.TTTCACCCCCACACCCCCAGCGTATTTTGGCCAAGAAGAAACAGGAACttt < 2:565481/101‑1 (MQ=255)
ccgccCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTA...GG.GTGGGGG.TTTCACCCCCACACCCCCAGCGTATTTTGGCCAAGAAGAAACAGGAACTTT.a < 1:3706764/101‑1 (MQ=255)
cgccCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTA...GG.GTGGGGG.TTTCACCCCCACACCCCCAGCGTATTTTGGCCAAGAAGAAACAGGAACTTT.Ac < 2:1537112/101‑1 (MQ=255)
cccGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTA...GG.GTGGGGG.TTTCACCCCCACACCCCCAGCGTATTTTGGCCAAGAAGAAACAGGAACTTT.Accc < 2:648535/101‑1 (MQ=255)
ccGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTA...GG.GTGGGGG.TTTCACCCCCACACCCCCAGCGTATTTTGGCCAAGAAGAAACAGGAACTTT.Acccc < 1:3633008/101‑1 (MQ=255)
ccGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTA...GG.GTGGGGG.TTTCACCCCCACACCCCCAGCGTATTTTGGCCAAGAAGAAACAGGAACTTT.Acccc < 2:2403350/101‑1 (MQ=255)
cGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTAG..GG.GG.GGGG.GTTCACCCCCCCACCCCCAGCGGATTTTTGCCAAGGAGAAACAAGGACTTT.ACCCCg > 2:4511280/1‑101 (MQ=255)
gATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTAG..GG.GG.GGGG.GTTCACCCCCCCACCCCCCCCGGATTTTGGCCAAGAAGAAACAGGAACTTT.ACCCCGA.g > 1:3142703/1‑101 (MQ=255)
aTTGCCGCCTTTGTCGCGGCGGCGCAGGGGTA...GG.GTGGGGG.TTTCACCCCCACACCCCCAGCGTATTTTGGCCAAGAAGAAACAGGAACTTT.ACCCCGA.gg < 2:1941796/101‑1 (MQ=255)
ttGCCGCCTTTGTCGCGGCGGCGCAGGGGTAGGGGG.GG.GGGG.TTTCCCCCCCCCCCCCCCCG.GATTTTTGGCCCAAAAAAAAAAGGAAATTT.Acccccggg > 1:1706403/1‑97 (MQ=255)
ccgccTTTGTCGCGGCGGCGCAGGGGTA...GG.GTGGGGG.TTTCACCCCCACACCCCCAGCGTATTTTGGCCAAGAAGAAACAGGAACTTT.ACCCCGA.gggggg < 1:4387631/101‑1 (MQ=255)
cgccTTTGTCGCGGCGGCGCAGGGGTAGG.GG.GG.GGGG.GTTTACCCCCCACCCCCCCCCGAATTTTGGCCAAAAAAAAAAAGGAAATTTCACCCCGG.ggggg > 2:3329539/1‑101 (MQ=255)
cgccTTTGTCGCGGCGGCGCAGGGGTA...GG.GTGGGGG.GTTTCCCCCCCCACCCCCCGCGTATTTTGGCCAAGAAGAAACAGGAACTTT.AACCCGA.ggggggg > 2:3525005/1‑101 (MQ=255)
cTTTGTCGCGGCGGCGCAGGGGTAG..GG.GG.GGGG.GTTCACCCCCCCACCCCCAGCGTATTTTGGCCCAGAAGAAACAGGAACTTT.ACCCCGA.GGGGGGGgcg > 2:2186966/1‑101 (MQ=255)
cTTTGTCGCGGCGGCGCAGGGGTA...GG.GTGGGGG.TTTCACCCCCACACCCCCAGCGTATTTTGGTCAAGAAGAAACAGGAACTTT.ACCCCGA.GGGGGGGgcg > 2:2319720/1‑101 (MQ=255)
cTTTGTCGCGGCGGCGCAGGGGTA...GG.GTGGGGG.TTTCACCCCCACACCCCCAGCGTATTTTGGCCAAGAAGAAACAGGAACTTT.ACCCCGA.GGGGGGGgcg < 1:1348673/101‑1 (MQ=255)
tttGTCGCGGCGGCGCAGGGGTAGGGGG.GG.GGGG.TTTCCCCCCCCCCCCCCCCCCCTTTTTTTG.CACAAAAAAAAAGAAAATTT.ACCCCCG.gggggggggg > 1:3427028/1‑99 (MQ=255)
ttGTCGCGGCGGCGCAGGGGTA...GG.GTGGGGG.TTTCACCCCCACACCCCCAGCGGATTTTGGCCAAGAAGAAACAGGAACTTT.ACCCCGA.GGGGGGGgcgcc > 2:2273853/1‑100 (MQ=255)
ttGTCGCGGCGGCGCAGGGGTA...GG.GTGGGGG.GTTTACCCCCCCACCCCCAGCGGATTTTGGCCAAGAAAAAAAAGGAACTTT.ACCCCGA.GGGGGGGgcgcg > 2:2599552/1‑101 (MQ=255)
tGTCGCGGCGGCGCAGGGGTA...GG.GTGGGGG.TTTCACCCCCACACCCCCAGCGGATTTTGGCCAAGAAGAAACAGGAACTTT.ACCCCGA.GGGGGGGgcgcgc > 2:2636556/1‑101 (MQ=255)
gTCGCGGCGGCGCAGGGGTA...GG.GTGGGGG.TTTCACCCCCACACCCCCAGCGTATTTTGGCCAAGAAGAAACAGGAACTTT.ACCCCGA.GGGGGGGGCGCGCt < 2:2005788/101‑1 (MQ=255)
cgcgGCGGCTCAGTGGTA...GG.GT.GGGGTTTTCACCCCCACACCCCCAGCTTTTTTTGGCCAAGAAGAAACAGGAACTTT.ACCCCGA.GGGGGGGGCGCGCTAt < 1:106059/101‑1 (MQ=255)
cgcgGCGGCGCAGGGGTA...GG.GTGGGGG.TTTCACCCCCACACCCCCAGCGTATTTTGGCCCAGAAGAAACAGGAACTTT.CCCCCGA.GGGGGGGGCGCGCTAt > 2:3853977/1‑101 (MQ=255)
gcggcggcgCAGGGGTA...GG.GTGGGGG.TTTCACCCCCACACCCCCAGCGTATTTTGGCCAAGAAGAAACAGGAACTTT.ACCCCGA.GGGGGGGGCGCGCTATc < 2:1749803/101‑1 (MQ=255)
gcggcggcgCAGGGGTA...GG.GTGGGGG.TTTCACCCCCACACCCCCAGCGTATTTTGGCCAAGAAGAAACAGGAACTTT.ACCCCGA.GGGGGGGGCGCGCTATc < 2:2846253/101‑1 (MQ=255)
cggcggcgCATGGGTA...GG.GTGGGGG.TTTCACCCCCACACCCCCAGCGTATTTTGGCCAAGAAGAAACAGGAACTTT.ACCCCGA.GGGGGGGGCGCGCTATct < 2:1314256/101‑1 (MQ=255)
ggcgCAGGGGTA...GG.GTGGGGG.TTTCACCCCCCCACCCCCAGCGTATTTTGGCCAAGAAGAAACAGGAACTTT.ACCCCGAGGGGGGGGGCGCGCTATctgct < 2:597017/101‑1 (MQ=255)
ggcgCAGGGGTA...GG.GTGGGGG.TTTCACCCCCACACCCCCAGCGTATTTTGGCCAAGAAGAAACAGGAACTTT.ACCCCGA.GGGGGGGGCGCGCTATctgctg < 2:251533/101‑1 (MQ=255)
cAGGGGTA...GG.GTGGGGG.TTTCACCCCCACACCCCCAGCGTATTTTGGCCAAGAAGAAACAGGAACTTT.ACCCCGA.GGGGGGGGCGCGCTATCTGCTGTTgg < 2:1276718/101‑1 (MQ=255)
cAGGGGTA...GG.GTGGGGG.TTTCACCCCCACACCCCCAGCGTATTTTGGCCAAGAAGAAACAGGAACTTT.ACCCCGA.GGGGGGGGCGCGCTATCTGCTGTTgg < 2:3810608/101‑1 (MQ=255)
cAGGGGTA...GG.GTGGGGG.TTTCACCCCCACACCCCCAGCGTATTTTGGCCAAGAAGAAACAGGAACTTT.ACCCCGA.GGGGGGGGCGCGCTATCTGCTGTTgg < 2:1853912/101‑1 (MQ=255)
aGGGGTA...GG.GTGGGGG.TTTCACCCCCACACCCCCAGCGTATTTTGGCCAAGAAGAAACAGGAACTTT.ACCCCGA.GGGGGGGGCGCGCTATCTGCTGTTGgc > 1:738469/1‑101 (MQ=255)
gggTA...GG.GTGGGGG.TTTCACCCCCACACCCCCAGCGTATTTTGGCCAAGAAGAAACAGGAACTTT.ACCCCGA.GGGGGGGGCGCGCTATCTGCTGTTGgcgc < 2:3282324/101‑1 (MQ=255)
a...GG.GTGGGGG.TTTCACCCCCACACCCCCAGCGTATTTTGGCCAAGAAGAAACAGGAACTTT.ACCCCGA.GGGGGGGGCGCGCTATCTGCTGTTGGCGCGTGa > 2:1258649/1‑101 (MQ=255)
gaggg.gG.GGGG.TTGCCCCCCCACCCCCCAAGGGTTTTTGGGCAAAGAAGAAACGGAACCTTT.CCCCCGA.GGGGGGGGCGCGCTATCTGCTGTTGGCGCGTg < 1:861424/98‑1 (MQ=255)
|
GGGCGGCTCAGGTCGACGTGTCGTCGGGGGTGGAATCGGCGCCCGGGGTCAAGGAGGCCGCCCGGATTGCCGCCTTTGTCGCGGCGGCGCAGGGGTA...GG.GT.GGGG.TTTCACCCCCACACCCCCAGCGTATTTTGGCCAAGAAGAAACAGGAACTTT.ACCCCGA.GGGGGGGGCGCGCTATCTGCTGTTGGCGCGTGA > NC_014034/1200694‑1200889
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 24 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|