| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,301,060 | +C | 93.6% | intergenic (+17/‑92) | urtA → / → urtC | urea ABC transporter permease UrtA/urea ABC transporter permease UrtC |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,301,060 | 1 | .→C | 93.6% | 21.8 ‑3.2 ‑0.6 | 140 | intergenic (+17/‑92) | urtA/urtC | urea ABC transporter permease UrtA/urea ABC transporter permease UrtC |
| Reads supporting (aligned to +/- strand): new base (77/54): ref base (2/7): total (79/61) | ||||||||||
| Fisher's exact test strand distribution p-value = 4.11e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 2.42e-01 | ||||||||||
Only 100 of 158 total aligned reads displayed.
TGGATGATCCTCTTCATCATCATCTTCATCCAGTTCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.GCG.CC.TTTC.ATCTTGCCCAAAATATCCCGCGGGGGTCCCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACC > NC_014034/1300960‑1301157
|
tGGATGATCCTCTTCATCATCATCTTCATCCAGTTCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.ccg < 1:3256790/101‑1 (MQ=255)
tGGATGATCCTCTTCATCATCATCTTCATCCAGTTCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.ccg > 1:352852/1‑101 (MQ=255)
ggATGATCCTCTTCATCATCATCTTCATCCAGTTCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCAGATGCCCCCCG.ccg.c > 1:3936996/1‑101 (MQ=255)
gatgatCCTCTTCATCATCATCTTCATCCAGTTCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCG.cc < 2:625746/101‑1 (MQ=255)
gatgatCCTCTTCATCATCATCTTCATCCAGTTCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCG.cc < 2:3408840/101‑1 (MQ=255)
atgatCCTCTTCATCATCATCTTCATCCAGTTCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCG.ccc > 2:2731523/1‑100 (MQ=255)
atgatCCTCTTCATCATCATCTTCATCCAGTTCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCG.ccc < 2:3038671/101‑2 (MQ=255)
tgatCCTCTTCATCATCATCTTCATCCAGTTCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCG.ccct > 1:2336911/1‑99 (MQ=255)
gatCCTCTTCATCATCATCTTCATCCAGTTCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCG.CC.ctt < 1:2915595/101‑1 (MQ=255)
gatCCTCTTCATCATCATCTTCATCCAGTTCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCG.CC.ctt < 1:2153269/101‑1 (MQ=255)
atCCTCTTCATCATCATCTTCATCCAGTTCCGCAGGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCG.CC.cttt < 1:4072449/101‑2 (MQ=255)
tCCTCTTCATCATCATCTTCATCCAGTTCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCG.CC.ctttc < 1:4026433/101‑3 (MQ=255)
tCCGCTTCATCATCATCTTCATCTAGTTCCGCCCTCGCGACATCATCGAGCAGCGCGTGCACGCCGCGGGAGATTGTGCCGATCCCCCCCG.CCG.CC.ctttc < 2:653416/101‑3 (MQ=255)
ccTCTTCATCATCATCTTCATCCAGTTCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.a < 1:1671837/101‑1 (MQ=255)
ccTCTTCATCATCATCTTCATCCAGTTCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.a < 2:1354306/101‑1 (MQ=255)
ccTCTTCATCATCATCTTCATCCAGTTCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.a > 1:3875356/1‑101 (MQ=255)
ccTCTTCATCATCATCTTCATCCAGTTCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.a > 2:1128843/1‑101 (MQ=255)
ccTCTTCATCATCATCTTCATCCAGTTCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.a < 1:2958431/101‑1 (MQ=255)
ttCATCATCATCTTCATNCAGTTCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCtt < 2:1497426/101‑1 (MQ=255)
ttCATCATCATCTTCATCCAGTTCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCtt > 1:3690225/1‑101 (MQ=255)
tcatcatcaTCTTCATCCAGTTCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTg < 1:1690899/101‑1 (MQ=255)
atcatcatcTTCATCCAGTTCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGcc > 1:3776642/1‑101 (MQ=255)
tcatcatcTTCATCCAGTTCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGccc < 2:4483787/101‑1 (MQ=255)
tcatcatcTTCATCCAGTTCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGccc > 2:4131907/1‑101 (MQ=255)
catcatcTTCATCCAGTTCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCa < 1:3780397/101‑1 (MQ=255)
catcatcTTCATCCAGTTCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCa > 2:1222446/1‑101 (MQ=255)
catcatcTTCATCCAGTTCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCa > 2:2604283/1‑101 (MQ=255)
atcatcTTCATCCAGTTCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCaa < 2:2401184/101‑1 (MQ=255)
atcatcTTCATCCAGTTCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCaa < 2:2207318/101‑1 (MQ=255)
atcatcTTCATCCAGTTCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCaa > 2:1249306/1‑101 (MQ=255)
atcatcTTCATCCAGTTCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCaa < 1:693949/101‑1 (MQ=255)
atcatcTTCATCCAGTTCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCaa < 2:1848156/101‑1 (MQ=255)
catcTTCATCCAGTTCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCaaaa < 1:3200543/101‑1 (MQ=255)
catcTTCATCCAGTTCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCaaaa > 1:1575326/1‑101 (MQ=255)
catcTTCATCCAGTTCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCaaaa < 1:1704748/101‑1 (MQ=255)
catcTTCATCCAGTTCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCaaaa > 1:4567592/1‑101 (MQ=255)
catcTTCATCCAGTTCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCaaaa < 1:4430259/101‑1 (MQ=255)
atcTTCATCCAGTTCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAat > 2:547907/1‑101 (MQ=255)
atcTTCATCCAGTTCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAat > 2:1946805/1‑101 (MQ=255)
tcTTCATCCAGTTCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAata > 1:1288192/1‑101 (MQ=255)
cTTCATCCAGTTCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAatat > 1:3458168/1‑101 (MQ=255)
ttCATCCAGTTCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATc < 2:2553710/101‑1 (MQ=255)
tCATCCAGTTCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATcc < 2:3407447/101‑1 (MQ=255)
tCATCCAGTTCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATcc < 1:3374497/101‑1 (MQ=255)
cATCCAGTTCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATccc < 1:2360148/101‑1 (MQ=255)
cATCCAGTTCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATccc > 2:3987989/1‑101 (MQ=255)
aTCCAGTTCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCCcg < 2:1009039/101‑1 (MQ=255)
tCCAGTTCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCCcgc > 1:25391/1‑101 (MQ=255)
tCCAGTTCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCCcgc < 2:1575226/101‑1 (MQ=255)
cAGGTCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCCCGCgg > 2:4022015/1‑101 (MQ=38)
aGTTCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCCCGCggg > 1:4230311/1‑101 (MQ=255)
aGTTCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCCCGCggg > 1:2947000/1‑101 (MQ=255)
ttCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCCCGCggggg > 1:267734/1‑101 (MQ=255)
tCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCCCGCgggggc > 1:4289844/1‑100 (MQ=255)
tCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCCCGCGGGGGt > 1:1416966/1‑101 (MQ=255)
tCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCCCGCGGGGGt > 1:611430/1‑101 (MQ=255)
tCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATATTGCCCAAAATATCCCGCGGGGGt < 1:4724337/101‑1 (MQ=38)
ccgcccgcGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCCCGCGGGGGTc < 1:896662/101‑1 (MQ=255)
ccgcccgcGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCCCGCGGGGGTc > 2:18366/1‑101 (MQ=255)
cgcccgcGCGGCATCATCGCGCGGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCCCGCGGGGGTcc < 1:4132153/101‑1 (MQ=38)
cccgcGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCCCGCGGGGGTccgg < 1:3367403/101‑3 (MQ=255)
cgcgGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCCCGCGGGGGTCCGggggc < 2:2862514/101‑2 (MQ=37)
cgcgGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCCCGCGGGGGTCCGggggc < 1:2731677/101‑2 (MQ=37)
gcgGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCCCGCGGGGGT.CCGGGGgcg < 1:2794018/101‑1 (MQ=25)
catcatCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCCCGCGGGGGT.CCGGGGGCGCGaa > 2:2767039/1‑101 (MQ=25)
catcatCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCCCGCGGGGGT.CCGGGGGCGCGaa < 2:4676412/101‑1 (MQ=25)
catcatCGCGCGGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCCCGCGGGGGT.CCGGGGGCGCGaa < 2:352818/101‑1 (MQ=25)
atcatcGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCCCGCGGGGGT.CCGGGGGCGCGAAg > 2:1368045/1‑101 (MQ=25)
tcatcGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCCCGCGGGGGT.CCGGGGGCGCGAAGc > 1:195771/1‑101 (MQ=25)
tcatcGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCCCGCGGGGGT.CCGGGGGCGCGAAGc > 2:221191/1‑101 (MQ=25)
tcatcGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCCCGCGGGGGT.CCGGGGGCGCGAAGc < 1:3243186/101‑1 (MQ=25)
tcatcGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCCCGCGGGGGT.CCGGGGGCGCGAAGc > 2:2440784/1‑101 (MQ=25)
catcGCGCTGCGCGGCCNCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCCCGCGGGGGT.CCGGGGGCGCGAAGcc < 2:1148728/101‑1 (MQ=21)
catcGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCCCGCGGGGGT.CCGGGGGCGCGAAGcc < 1:3014417/101‑1 (MQ=25)
catcGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCCCGCGGGGGT.CCGGGGGCGCGAAGcc > 2:4754076/1‑101 (MQ=25)
atcGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCCCGCGGGGGT.CCGGGGGCGCGAAGccc > 2:1883942/1‑101 (MQ=21)
cgcgCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCCCGCGGGGGT.CCGGGGGCGCGAAGccccc < 2:4239684/101‑1 (MQ=21)
cgcgCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCCCGCGGGGGT.CCGGGGGCGCGAAGccccc > 1:2050060/1‑101 (MQ=21)
cgcgCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCCCGCGGGGGT.CCGGGGGCGCGAAGccccc > 1:181476/1‑101 (MQ=21)
cggcccgcccgcgccgcCGGAGATGGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCCCGCGGGGGT.CCGGGGGCGCGAAGCCCCCGgcg < 2:3689995/93‑1 (MQ=17)
cTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCCCGCGGGGGT.CCGGGGGCGCGAAGCCCCCGgcg > 2:2891035/1‑101 (MQ=21)
ggCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCCCGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCa > 2:3206918/1‑101 (MQ=18)
gcccccgccgcGGGAGATTGAGCCGATCCCCCCCGCCCC.CC.TTTC.ATCTTGCCCAAAATATCCCGGGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCa < 2:4545704/96‑1 (MQ=17)
ccgggAGATTGAGCCGATCCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATACCCCGGGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGga < 1:1128929/98‑1 (MQ=18)
ggAGATTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCCCGCGGGGGT.CCGGGGGCGCGAAGCCGCCGGCGCCGCCAGATCCCGGAGAc > 2:2073043/1‑101 (MQ=18)
gagaTTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCCCGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGAcc > 2:4168766/1‑101 (MQ=18)
gaTTGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCCCGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGAcccc > 2:1638474/1‑101 (MQ=18)
ttGAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCCCGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGa > 1:2490759/1‑101 (MQ=18)
tgccccccccccccccC.CCG.CCTTTTC.CTCTTGCCAAAATTACCCGGCGGGGG.CCGGGGGGCGCGACGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGAt < 2:3730674/91‑1 (MQ=255)
gacccGATCCCCCCCG.CCGCCC.TTTC.ATCTTCCCAAAAATACCCCG.GGGGGGCCGGGGGGCGCGAACCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATg < 1:1249396/98‑1 (MQ=255)
gAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCCCTCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATg > 1:508158/1‑101 (MQ=18)
gAGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATACCGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATg > 2:2428678/1‑101 (MQ=18)
aGCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCCCGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGa > 2:914175/1‑101 (MQ=18)
gCCGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCCCGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGac > 2:3541710/1‑101 (MQ=18)
cgaccccccccG.CCGCCC.TTTC.ATCTTCCCAAAAATACCCCGGGGGGGT.CGGGGGGCGCGAACCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGacac < 1:1222536/96‑1 (MQ=255)
cGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCCCGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGacac > 2:4483/1‑101 (MQ=18)
cGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCCCGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGacac > 2:3758731/1‑101 (MQ=18)
cGATGCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCCCGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGacac < 1:1476167/101‑1 (MQ=18)
gCCCCCCG.CCGCCC.TTTC.ATCTTGCCCAAAATATCCCGCGGGGGT.CCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGcc > 2:3139193/1‑101 (MQ=18)
cccg.cC.CTTCAATCTTCCCAAAAATCCCCCG.GGGGGGCCGGGGGGCGCGACCCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGAcc < 2:4567339/99‑1 (MQ=255)
|
TGGATGATCCTCTTCATCATCATCTTCATCCAGTTCCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.GCG.CC.TTTC.ATCTTGCCCAAAATATCCCGCGGGGGTCCCGGGGGCGCGAAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACC > NC_014034/1300960‑1301157
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 26 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|