| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,396,031 | +G | 20.6% | intergenic (+843/‑88) | RCAP_rcc01306 → / → RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,396,031 | 2 | .→G | 20.6% | 174.2 ‑0.6 ‑0.5 | 247 | intergenic (+843/‑88) | RCAP_rcc01306/RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (25/26): ref base (86/110): total (111/136) | ||||||||||
| Fisher's exact test strand distribution p-value = 5.31e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 2.96e-01 | ||||||||||
Only 100 of 271 total aligned reads displayed.
GATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT > NC_014034/1395931‑1396131
|
gCGTTCATGGCCTACGTCGGGCAGGGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTc < 2:879863/101‑1 (MQ=255)
cGTTCATGGCCTACGTCGGGCAGTGGACTGGTCCCCCCCCCCGCGGGGGCGTGGATCGAACCTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCg < 2:2896890/101‑1 (MQ=255)
gTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGc > 2:3216156/1‑101 (MQ=255)
gTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGc > 1:3089716/1‑101 (MQ=255)
tCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTc > 1:3346228/1‑101 (MQ=255)
tCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTc > 1:614023/1‑101 (MQ=255)
tGGCCTCCGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTcccc < 1:792570/101‑1 (MQ=255)
tGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTcccc > 1:857041/1‑101 (MQ=255)
gCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTcccccc > 1:4721398/1‑101 (MQ=255)
ccTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTCCCCCcg < 2:4750750/101‑1 (MQ=255)
tACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTCCCCCcgcg < 1:4636794/101‑1 (MQ=255)
tACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GCCGCTCCCCCcgcg > 2:3703753/1‑101 (MQ=255)
aCGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCG..CCCTCGATCGGCGCTTGCCTCACGCCTGC.CGC..GTCCCCCCCCCCGCgg > 1:2289010/1‑101 (MQ=255)
cGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTCCCCCCGCggg > 2:1118716/1‑101 (MQ=255)
cGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTCCCCCCGCggg > 1:948638/1‑101 (MQ=255)
ggCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCgg > 1:2619908/1‑100 (MQ=255)
ggCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGt < 1:1814025/101‑1 (MQ=255)
cgTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGa < 1:4470887/100‑1 (MQ=255)
aGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGa < 1:177725/101‑1 (MQ=255)
aGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGa < 2:832172/101‑1 (MQ=255)
gTGGGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGAt < 1:3981755/101‑1 (MQ=255)
gTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGTAt < 2:3089516/101‑1 (MQ=255)
gTGGACTGGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGAt < 1:1004555/101‑1 (MQ=255)
tGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATc < 2:2239564/101‑1 (MQ=255)
ctgcgcggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCG..GCCTCGATCCG.GTCAGCCTC.GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGAt > 1:1834317/7‑101 (MQ=9)
tgcgcggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCG..GCCTCGATCCG.GTCAGCCTC.GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATc < 2:2356953/96‑1 (MQ=2)
tgcgcggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCG..GCCTCGATCCG.GTCAGCCTC.GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATc > 2:2543597/6‑101 (MQ=2)
tgcgcggTCGCGCCCCCCGCGGGGGCGTGGATCGAAACTCG..GCCTCGATCCG.GTCAGCCTC.GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATc < 2:3113748/96‑1 (MQ=2)
ggACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCg < 1:829343/101‑1 (MQ=255)
ggACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCg > 2:3490451/1‑101 (MQ=255)
gcgcTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTGATGACCAGATCCGCAATTGGC.C.GGGCTCG.ATC..GTCGCTCCCCCCGCGGGGGCGTGGATCg < 2:2421462/98‑1 (MQ=0)
gtcTGGTCCCTCCCCCCGCGGGGGCGTGGATCGAAACTCG..CCCCCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCCCCCCCCGCGGGGGCGTGGATCGa < 2:850439/99‑1 (MQ=255)
gACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGCCGTGGATCGa > 2:2153862/1‑101 (MQ=255)
cgcggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCG..GCCTCGATCCG.GTCAGCCTC.GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGa < 1:2937090/98‑1 (MQ=2)
cgcggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCG..GCCTCGATCCG.GTCAGCCTC.GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGa < 2:3769493/98‑1 (MQ=2)
aCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGaa < 2:1552378/101‑1 (MQ=255)
aCTGGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGaa < 2:962473/101‑1 (MQ=255)
tGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc > 1:2414293/1‑101 (MQ=255)
tGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CCC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc > 1:4111942/1‑101 (MQ=255)
ggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCG..GCCTCGATCCG.GTCAGCCTC.GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc < 1:1385337/101‑1 (MQ=2)
gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCG..GCCTCGATCCG.GTCAGCCTC.GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAct < 1:3054694/101‑2 (MQ=2)
gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAg > 2:272708/1‑101 (MQ=255)
gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAg > 2:2372060/1‑101 (MQ=255)
gTCGCCCCCCCCGCGGGGGCGTGGATCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAg < 1:1331592/101‑1 (MQ=255)
tCGCTCCCCCCGCGGGGGCGTTGATCGAAACTCG..GCCTCGATCCG.GTCAGCCTC.GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActt > 1:4545124/1‑99 (MQ=2)
tCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCG..GCCTCGATCCG.GTCAGCCTC.GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActt > 1:3547491/1‑99 (MQ=2)
tCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAgg > 2:2275759/1‑101 (MQ=255)
cGCTCCCCCCGCGGGGGCGTGGATCGAAACTCG..GCCTCGATCCG.GTCAGCCTC.GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActtg < 2:4342136/101‑4 (MQ=2)
cGCTCCCCCCGCGGGGGCGTGGATCGAAACTCG..GCCTCGATCCG.GTCAGCCTC.GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActtg > 2:39766/1‑98 (MQ=2)
gCTCCCCCCGCGGGGGCGTGGATCGAAACTCG..GCCTCGATCCG.GTCAGCCTC.GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActtga > 1:3186402/1‑97 (MQ=2)
gCTCCCCCCGCGGGGGCGTGGATCGAAACTCG..GCCTCGATCCG.GTCAGCCTC.GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActtga > 1:2180151/1‑97 (MQ=2)
gCTCCCCCCGCGGGGGCGTGGATCGAAACTCG..GCCTCGATCCG.GTCAGCCTC.GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActtga < 1:4235447/101‑5 (MQ=2)
gCTCCCCCCGCGGGGGCGTGGATCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGgcg < 2:4178001/101‑1 (MQ=255)
gCTCCCCCCGCGGGGGCGTGGATCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTCCCCACGCGGGGGCGTGGATCGAAACAGgcg > 2:495567/1‑101 (MQ=255)
gCTCCCCACGCGGGGGCGGGGATCGGAACTCG..CCCTCGGTCCGCGCTTGCCTCACGCCTCG.CGT..GTCGATTCCCCCGCGGGGGAGAGGATCGcaaaaaggg > 2:2504275/1‑95 (MQ=255)
tCCCCCCGCGGGGGCGTGGATCGAAACTCG..GCCTCGATCCG.GTCAGCCTC.GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActtgatg > 1:752793/1‑95 (MQ=2)
ccccccGCGGGGGCGTGGATCGAAACTCG..GCCTCGATCCG.GTCAGCCTC.GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActtgatga < 2:1378354/101‑8 (MQ=2)
cccccGCGGGGGCGTGGATCGAAACTCG..GCCTCGATCCG.GTCAGCCTC.GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActtgatgac > 1:1927630/1‑93 (MQ=2)
ccccGCGGGGGCGTGGATCGAAACTCG..GCCTCGATCCG.GTCAGCCTC.GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActtgatgacc < 2:1632631/101‑10 (MQ=2)
cccGCGGGGGCGTGGATCGAAACTCG..GCCTCGATCCG.GTCAGCCTC.GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActtgatgacca > 1:1695958/1‑91 (MQ=2)
cccGCGGGGGCGTGGATCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTg < 2:1524326/101‑1 (MQ=255)
cccGCGGGGGCGTGGATCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTg < 2:1942291/101‑1 (MQ=255)
cgcgGGGGCGTGGATCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGAt > 2:2905250/1‑101 (MQ=255)
gcgGGGGCGTGGATCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATg < 2:3229130/101‑1 (MQ=255)
gcgGGGGCGTGGATCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATg > 1:39249/1‑101 (MQ=255)
cgGGGGCGTGGATCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGt < 2:4381624/101‑1 (MQ=255)
gggggCGTGGATCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGta > 1:582953/1‑101 (MQ=255)
ggggCGTGGATCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGtat < 2:1075932/101‑1 (MQ=255)
gggCGTGGATCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGtata > 1:2367390/1‑101 (MQ=255)
gggCGTGGATCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGtata < 1:1363187/101‑1 (MQ=255)
gggCGTGGATCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGtata > 2:2666145/1‑101 (MQ=255)
ggCGTGGATCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTatat < 1:3729327/101‑1 (MQ=255)
ggCGTGGATCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTatat < 1:4208691/101‑1 (MQ=255)
gCGTGGATCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATg < 1:848214/101‑1 (MQ=255)
gCGTGGATCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATg > 1:4409809/1‑101 (MQ=255)
cGTGGATCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGc < 2:3346026/101‑1 (MQ=255)
gTGGATCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGcc > 1:2129515/1‑101 (MQ=255)
aTCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGt < 2:1173173/101‑1 (MQ=255)
aTCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGt < 1:2054335/101‑1 (MQ=255)
gAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTCCCCCTGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTgag < 1:4016127/101‑1 (MQ=255)
gAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTgag > 1:2657605/1‑101 (MQ=255)
cG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCt < 2:1342405/101‑1 (MQ=255)
gATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTc < 1:3860529/101‑1 (MQ=255)
gATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTc > 2:1061649/1‑101 (MQ=255)
gATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTc > 1:371506/1‑101 (MQ=255)
ccGCGCTTGCCTCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTcccc < 2:686383/101‑1 (MQ=255)
ccGCGCTTGCCTCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTcccc > 1:1135476/1‑101 (MQ=255)
gcgcTTGCCTCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTcccccc < 2:2089705/101‑1 (MQ=255)
gCCTCCCGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCgggg < 2:1479251/101‑1 (MQ=255)
cTCACGCCTGC.CGC..GTCGCCCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGc < 1:1053956/101‑1 (MQ=255)
cACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGt > 2:172877/1‑101 (MQ=255)
aCGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTg > 2:4681798/1‑101 (MQ=255)
cGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTgg < 2:4406922/101‑1 (MQ=255)
gCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGa < 2:1807739/101‑1 (MQ=255)
ccTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGAt < 2:3913655/101‑1 (MQ=255)
ccTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGAt < 2:3409069/101‑1 (MQ=255)
cTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATc < 1:2830887/101‑1 (MQ=255)
tGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCg < 2:2017957/101‑1 (MQ=255)
gC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGCCGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGa > 2:2197265/1‑101 (MQ=255)
c..gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCCCCGGGGCGTGGATCGAAACt > 1:3394475/1‑101 (MQ=255)
|
GATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCG..CCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT > NC_014034/1395931‑1396131
Base quality scores:
ATCG
< 3 ≤
ATCG
< 19 ≤
ATCG
< 26 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|