| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,740,769 | +G | 100% | intergenic (+6/+129) | cxp → / ← RCAP_rcc01610 | thermostable carboxypeptidase 1/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,740,769 | 1 | .→G | 100.0% | 17.0 | 189 | intergenic (+6/+129) | cxp/RCAP_rcc01610 | thermostable carboxypeptidase 1/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (92/88): ref base (1/7): total (94/95) | ||||||||||
| Fisher's exact test strand distribution p-value = 6.46e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.27e-03 | ||||||||||
Only 100 of 224 total aligned reads displayed.
GCGAGACGATCGTGACCGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GA.GGGG.CGCTGC.CCCCCG.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAG.CA.AGATGAAAGGCATCCGGTTTCATCTTGCTTCAAATACCTCG > NC_014034/1740669‑1740863
|
gcgAGACGATCGTGACCGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.Ga < 1:1521672/101‑1 (MQ=255)
gcgAGACGATCGTGACCGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.Ga > 1:1780939/1‑101 (MQ=255)
cgAGACGATCGTGACCGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GA.g > 1:2841302/1‑101 (MQ=255)
gagaCGATCGTGACCGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GA.gg > 2:4135609/1‑101 (MQ=255)
agaCGATCGTGACCGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GA.ggg > 2:3035673/1‑101 (MQ=255)
aCGATCGTGACCGCCGGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GA.ggggg < 2:1189690/101‑2 (MQ=255)
cGATCGTGACCGCCTGCGGGTTCGAGCCGACGGAAGTACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GA.gggggc > 2:4302545/1‑99 (MQ=255)
cGATCGTGACCGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GA.gggggc < 1:2453890/101‑3 (MQ=255)
gATCGTGCCCGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GA.gggggcg < 2:1785187/101‑4 (MQ=255)
cGTGACCGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTg > 1:436176/1‑101 (MQ=255)
gTGACCGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGc > 1:1680217/1‑101 (MQ=255)
tGACCGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GA.gggggcgcttcc < 2:3062769/101‑9 (MQ=255)
gcccGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGc.cc < 2:2695273/99‑1 (MQ=255)
cGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCGGc.ccccg > 2:557254/1‑100 (MQ=255)
cTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGc.ccccgccg < 2:1992394/101‑5 (MQ=255)
cTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGc.ccccgccg > 1:672830/1‑97 (MQ=255)
gCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAg > 2:380391/1‑101 (MQ=255)
ttCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGAt > 2:711241/1‑101 (MQ=255)
gAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATCCGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGcc < 1:51182/101‑1 (MQ=255)
aGCCTACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCt > 1:782753/1‑101 (MQ=255)
cGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCgg > 1:718439/1‑101 (MQ=255)
cGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCgg > 2:2484720/1‑101 (MQ=255)
ggAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGcccc > 1:2939017/1‑101 (MQ=255)
ggAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGcccc > 2:3870626/1‑101 (MQ=255)
gaagaaCCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGccccc < 2:2413959/101‑1 (MQ=255)
gaagaaCCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGccccc < 2:3723533/101‑1 (MQ=255)
aagaaCCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGcccccc < 2:3807801/101‑1 (MQ=255)
agaaCCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCg > 1:610410/1‑101 (MQ=255)
agaaCCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGAGGCCTCGGCCCCCCg > 1:3055482/1‑101 (MQ=255)
gaaCCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGGGATGCCTCGGCCCCCCgg > 1:4622825/1‑101 (MQ=255)
acccGTTTTTGAACTATCTCGAAGGCAAAGCCCCCGCTATCTCCCGTCTTTGGGGGCGGG.GGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCggg < 1:48073/99‑1 (MQ=255)
aaCCGCTTCTGGACTATCTCGAAAGCAAATCCGCCGCGATCTACCTGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCggg < 1:3994406/101‑1 (MQ=255)
aaCCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCggg < 2:2785332/101‑1 (MQ=255)
aaCCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCggg < 2:322237/101‑1 (MQ=255)
ccGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCgggga > 1:1657615/1‑99 (MQ=255)
ccGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGat < 2:672599/101‑1 (MQ=255)
cGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGaga > 1:2118702/1‑99 (MQ=255)
gCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGatat > 1:2000156/1‑101 (MQ=255)
gCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGatat < 1:1026675/101‑1 (MQ=38)
gCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCAGC.CGAGGCGATGCCTCCGGCGCCCGGGatat > 2:4538940/1‑101 (MQ=255)
cTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATAtt < 1:2390312/101‑1 (MQ=38)
cTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCCC.CGCGGCGATGCCTCGGCCCCCCGGGGTAtt > 1:1904322/1‑101 (MQ=255)
ttCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATAttt > 1:3240983/1‑101 (MQ=38)
ttCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATAttt > 2:3408985/1‑101 (MQ=38)
tCTGGACTATCTCGAAGGCAAATACGCCGCGATCTACCGGCTTGGAGGGC.GAGGGGG.CGCCGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTc < 1:1271220/101‑1 (MQ=37)
tCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTc < 2:2667028/101‑1 (MQ=38)
cTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCg < 1:858361/101‑1 (MQ=38)
tGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGa > 2:2549455/1‑101 (MQ=38)
tGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGa > 2:1444392/1‑101 (MQ=38)
ggACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAg > 2:4147054/1‑101 (MQ=38)
ggACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAg > 2:2878993/1‑101 (MQ=38)
ggACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCCGC.CCCCCC.CCGGGGGGTGCCTCGGCCCCCCGGGGTATTTTGAg > 1:4706226/1‑101 (MQ=255)
gACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAG.c < 1:3539383/101‑1 (MQ=38)
aCTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAG.Ca < 1:380435/101‑1 (MQ=38)
aCTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAG.Ca > 1:1052006/1‑101 (MQ=38)
aCTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAG.Ca > 2:494612/1‑101 (MQ=38)
aCTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAG.Ca > 2:4438094/1‑101 (MQ=38)
cTATCTCGAAAGCAAATACGCCGCGATCTCCCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAG.Ca.a < 1:2447453/101‑1 (MQ=37)
cTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAG.Ca.a < 1:3359532/101‑1 (MQ=38)
cTATCCCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAG.Ca.a < 1:2231273/101‑1 (MQ=37)
tATCTCGAAAGCAAATACGCCGCGATCTCCCGGCTTGGAGGGC.GAGGGGG.CCCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAG.CA.Ag < 1:4186306/101‑1 (MQ=25)
tATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAG.CA.Ag > 1:141822/1‑101 (MQ=38)
tATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAG.CA.Ag < 1:4130540/101‑1 (MQ=38)
tATCCCGAAAGCAAATACGCCCCGATCGACCGGCTTGGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAG.CA.Ag < 1:4561185/101‑1 (MQ=25)
aTCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAG.CA.AGa > 2:4466167/1‑101 (MQ=38)
aTCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAG.CA.AGa > 1:2742630/1‑101 (MQ=38)
aTCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAG.CA.AGa > 1:4500445/1‑101 (MQ=38)
aTCTCGAAAGCAAATACGCCGCGATCAACCCGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CTAGGCGATGCCCCGGCCCCCCGGGATATTTCGAG.CA.AGa < 2:3678032/101‑1 (MQ=25)
tctcGAAAGCAAATACGCCCCGATCTCCCGGCTTTGAGGGC.GA.GGGGTCGCTCC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAG.CA.AGAt < 1:1549650/101‑1 (MQ=25)
ctcGAAANAAAATANGCAGNNATCTANNNNNTTTGAGGGC.GAGGGGG.CGCTGC.CCNNNC.CNNGGCGATGCCTCGGCCCCCCGGGATATTTNGAG.CA.AGATg < 1:3201297/101‑1 (MQ=21)
tcGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAG.CA.AGATGa > 2:2828819/1‑101 (MQ=37)
cGAAAGCAAATACGCCGCGATCTCCCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAG.CA.AGATGaa < 2:1638008/101‑1 (MQ=37)
cGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAG.CA.AGATGaa > 1:313344/1‑101 (MQ=37)
gAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAG.CA.AGACGaaa > 2:2189160/1‑101 (MQ=37)
aaaGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAG.CA.AGATGAAAg > 1:1938775/1‑101 (MQ=37)
aaGCAAATCCGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAG.CA.AGATGAAAgg < 2:3440426/101‑1 (MQ=37)
gCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAG.CA.AGATGAAAGGCa > 1:2502949/1‑101 (MQ=37)
cAAATGCGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTCC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAG.CA.AGATGAAAGGCAt < 2:635306/101‑1 (MQ=37)
cAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAG.CA.AGATGAAAGGCAt < 2:607735/101‑1 (MQ=38)
cAAATACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAG.CA.AGATGAAAGGCAt < 2:2938841/101‑1 (MQ=38)
aaaTACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.GGGGGC.CCCCCC.CCCGGGGCGGGCCCGGCCCCCCCGGGTATTTTGAGACACAGATAAAAGGCa > 1:4746136/1‑101 (MQ=255)
aaTACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAG.CA.AGATGAAAGGCATcc > 1:3610008/1‑101 (MQ=37)
aaTACGCCGCGATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAG.CA.AGATGAAAGGCATcc > 1:2603109/1‑101 (MQ=37)
ccgccgcGATCTCCCGGCTTTGGGGGCGGG.GGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAG.CA.AGATGAAAGGCATCCGGt < 1:3035861/100‑1 (MQ=25)
ccccgcTATCTCCCGGCTTTGAGGGC.GAGGGGG.CGTTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAG.CA.AGATGAAAGGCATCCGGtt < 2:2302926/99‑1 (MQ=25)
ccgcGATCTACCGGCTTTGAGGGCGGG.GGGG.CGCGGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAG.CA.AGATGAAAGGCATCCGGTTTc < 2:1926491/101‑1 (MQ=25)
gcgATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAG.CA.AGATGAAAGGCATCCGGTTTCAt < 2:1284399/101‑1 (MQ=37)
gATCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAG.CA.AGATGAAAGGCATCCGGTTTCATCt > 1:2242387/1‑101 (MQ=37)
aTCTACCGGCTTTGGGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAG.CA.AGATGAAAGGCATCCGGTTTCATCtt < 2:1858975/101‑1 (MQ=25)
aTCTACCGGCTTTGAGGGCGGG.GGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAG.CA.AGATGAAAGGCATCCGGTTTCATCtt < 2:4622572/101‑1 (MQ=25)
aTCTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAG.CA.AGATGAAAGGCATCCGGTTTCATCtt > 1:2701105/1‑101 (MQ=25)
cTACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCGGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAG.CA.AGATGAAAGGAATCCGGTTTCATCTTGc > 2:2914330/1‑101 (MQ=25)
tACCGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCCGGATATTTCGAG.CA.AGATGAAAGGCATCCGGTTTCATCTTGCt > 2:2379400/1‑101 (MQ=25)
gacGGCTTGGGGGGC.GC.GGGG..GCGGCACCCCCGCCGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAG.CA.AGATGAAAGGCATCCGGTTTCATCTTGCtt < 1:4425157/99‑1 (MQ=18)
ccGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAG.CA.AGATGAAAGGCATCCGGTTTCATCTTGCTTc < 1:4228622/101‑1 (MQ=25)
cGGCTTTGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAG.CA.AGATGAAAGGCATCCGGTTTCATCTTGCTTCa < 1:624111/101‑1 (MQ=25)
ggCTTGGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAG.CA.AGATGAAAGGCATCCGGTTTCATCTTGCTTCaa < 2:4745880/101‑1 (MQ=25)
tttGAGGGC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAG.CA.AGATGAAAGGCATCCGGTTTCATCTTCCTTCAAATa > 2:3604247/1‑101 (MQ=25)
ttGAGGGC.GG.GGGGCCGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAG.CA.AGATGAAAGGCATCCGGTTTCATCTTGCTTCAAATAc < 2:4705970/101‑1 (MQ=21)
gggggC.GAGGGGG.CGCTGC.CCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAG.CA.AGATGAAAGGCATCCGGTTTCATCTTGCTTCAAATACCt < 1:1254537/99‑1 (MQ=21)
|
GCGAGACGATCGTGACCGCCTGCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGAGGGC.GA.GGGG.CGCTGC.CCCCCG.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAG.CA.AGATGAAAGGCATCCGGTTTCATCTTGCTTCAAATACCTCG > NC_014034/1740669‑1740863
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 23 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|