| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,768,902 | +G | 97.7% | intergenic (+29/‑27) | lpxA → / → RCAP_rcc01636 | acyl‑ACP‑‑UDP‑N‑acetylglucosamine O‑acyltransferase/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,768,902 | 1 | .→G | 97.7% | 3.8 0.0 ‑1.1 | 176 | intergenic (+29/‑27) | lpxA/RCAP_rcc01636 | acyl‑ACP‑‑UDP‑N‑acetylglucosamine O‑acyltransferase/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (87/85): ref base (2/2): total (89/87) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.00e+00 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 8.32e-02 | ||||||||||
Only 100 of 202 total aligned reads displayed.
AGCCGCCACGTCCGCGAAGTGCTTGATTTCATTCTTGGTCCCTCGGACCGCAGCTTCCTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.C.GG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCCGCGCCGGAAATGCTGGTCTGCGCGCTGGAAGGTCAGCCCGCGCCGGGCGGATCGGTGCT > NC_014034/1768802‑1768996
|
agCCGCCACGTCCGCGAAGTGCTTGATTTCATTCTTGGTCCCTCGGACCGCAGCTTCCTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.Gc.c < 1:816122/101‑1 (MQ=255)
gccgccACGTCCGCGAAGTGCTTGATTTCATTCTTGGTCCCTCGGACCGCAGCTTCCTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.C.g > 2:3979983/1‑101 (MQ=255)
cgccACGTCCGCGAAGTGCTTGATTTCATTCTTGGTCCCTCGGACCGCAGCTTCCTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.C.gg.g > 1:3823722/1‑101 (MQ=255)
cgccACGTCCGCGAAGTGCTTGATTTCATTCTTGGTCCCTCGGACCGCAGCTTCCTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.C.gg.g > 1:2110123/1‑101 (MQ=255)
ccACGTCCGCGAAGTGCTTGATTTCATTCTTGGTCCCTCGGACCGCAGCTTCCTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.C.gg.ggg < 1:4178504/101‑1 (MQ=255)
cGTCCGCGAAGTGCTTGATTTCATTCTTGGTCCCTCGGACCGCAGCTTCCTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.C.gg.ggg.ggg > 2:1529558/1‑100 (MQ=255)
gTCCGCGAAGTGCTTGATTTCATTCTTGGTCCCTCGGACCGCAGCTTCCTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.C.gg.ggg.gggc > 2:4204514/1‑99 (MQ=255)
tCCGCGAAGTGCTTGATTTCATTCTTGGTCCCTCGGACCGCAGCTTCCTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.C.gg.ggg.gggcg < 2:3336400/101‑4 (MQ=255)
tCCGCGAAGTGCTTGATTTCATTCTTGGTCCCTCGGACCGCAGCTTCCTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.C.gg.ggg.gggcg > 1:4543430/1‑98 (MQ=255)
ccGCGAAGTGCTTGATTTCATTCTTGGTCCCTCGGACCGCAGCTTCCTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.C.gg.ggg.gggcgc < 1:106229/101‑5 (MQ=255)
ccGCGAAGTGCTTGATTTCATTCTTGGTCCCTCGGACCGCAGCTTCCTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.C.gg.ggg.gggcgc > 1:438353/1‑97 (MQ=255)
cgAAGTGCTTGATTTCATTCTTGGTCCCTCGGACCGCAGCTTCCTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCt > 2:3114390/1‑101 (MQ=255)
cgAAGTGCTTGATTTCATTCTTGGTCCCTCGGACCGCAGCTTCCTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.C.gg.ggg.gggcgccct > 2:1995300/1‑94 (MQ=255)
gAAGTGCTTTATTTCATTCTTGGTCCCTCGGACCGCAGCTTCCTGACGCCGCGATGAGCGCGGGATCTGAAACCGCTCTGATC.GC.CGGG.GGG.GGCGCGCTg < 2:3047480/101‑1 (MQ=255)
gAAGTGCTTGATTTCATTCTTGGTCCCTCGGACCGCAGCTTCCTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTg > 2:4387732/1‑101 (MQ=255)
gAAGTGCTTGATTTCATTCTTGGTCCCTCGGACCGCAGCTTCCTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTg < 1:2394008/101‑1 (MQ=255)
gAAGTGCTTGATTTCATTCTTGGTCCCTCGGACCGCAGCTTCCTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.C.GG.GGGCGGCGCGCTg > 2:185795/1‑101 (MQ=255)
aaGTGCTTGATTTCATTCTTGGTCCCTCGGACCGCAGCTTCCTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGc > 1:4339897/1‑101 (MQ=255)
aaGTGCTTGATTTCATTCTTGGTCCCTCGGACCGCAGCTTCCTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGc > 1:1908989/1‑101 (MQ=255)
aGTGCTTGATTTCATTCTTGGTCCCTCGGACCGCAGCTTCCTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGcc < 2:3720279/101‑1 (MQ=255)
aGTGCTTGATTTCATTCTTGGTCCCTCGGACCGCAGCTTCCTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGcc < 1:590554/101‑1 (MQ=255)
gTGCTTGATTTCATTCTTGGTCCCTCGGACCGCAGCTTCCTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCg > 2:4036704/1‑101 (MQ=255)
gCTTGATTTCATTCTTGGTCCCTCGGACCGCAGCTTCCTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCggg < 1:2795793/101‑1 (MQ=255)
gCTTGATTTCATTCTTGGTCCCTCGGACCGCAGCTTCCTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCggg > 2:3579165/1‑101 (MQ=255)
cTTGATTTCATTCTTGGTCCCTCGGACCGCAGCTTCCTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCgggg < 2:2122324/101‑1 (MQ=255)
cTTGATTTCATTCTTGGTCCCTCGGACCGCAGCTTCCTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCgggg > 2:4062756/1‑101 (MQ=255)
ttGATTTCATTCTGGGTCCCTCGGACCGCAGCTTCCTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGgc < 2:1769309/101‑1 (MQ=255)
gATTTCATTCTTGGTCCCTCGGACCGCAGCTTCCTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGgctg > 1:836708/1‑101 (MQ=255)
gATTTCATTCTTGGTCCCTCGGACCGCAGCTTCCTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGgctg < 1:3034784/101‑1 (MQ=255)
tttCATTCTTGGTCCCTCGGACCGCAGCTTCCTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGgctgct < 2:739051/101‑1 (MQ=255)
tCATTCTTGGTCCCTCGGACCGCAGCTTCCTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCttt < 2:2110002/101‑1 (MQ=255)
cATTCTTGGTCCCTCGGACCGCAGCTTCCTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCtttt < 2:4216871/101‑1 (MQ=255)
cATTCTTGGTCCCTCGGACCGCAGCTTCCTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCtttt < 2:3838032/101‑1 (MQ=255)
cATTCTTGGTCCCTCGGACCGCAGCTTCCTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCtttt > 1:2722823/1‑101 (MQ=255)
cATTCTTGGTCCCTCGGACCGCAGCTTCCTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCtttt < 1:2994878/101‑1 (MQ=255)
cATTCTTGGTCCCGCGGACCGCAGCTTCCTGACGCCGCGATGAGCGCGGGATCGGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCtttt < 1:1754875/101‑1 (MQ=255)
aTTCTTGGTCCCTCGGACCGCAGCTTCCTGACGTCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTg < 1:4036946/101‑1 (MQ=255)
aTTCTTGGTCCCTCGGACCGCAGCTTCCTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTg > 2:65060/1‑101 (MQ=255)
ttGGTCCCTCGGACCGCAGCTTCCTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAgg > 2:1894659/1‑101 (MQ=255)
ggTCCCTCGGACCGCAGCTTCCTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGcc > 1:1251519/1‑101 (MQ=255)
gTCCCTCGGACCGCAGCTTCCTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCcg < 2:762457/101‑1 (MQ=255)
gTCCCTCGGACCGCAGCTTCCTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCcg < 1:2336420/101‑1 (MQ=255)
gTCCCTCGGACCGCAGCTTCCTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCcg < 1:97975/101‑1 (MQ=255)
cccTCGGACCGCAGCTTCCTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCcgcg > 1:1010500/1‑101 (MQ=255)
ccTCGGACCGCAGCTTCCTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCCgcgc > 1:1528278/1‑101 (MQ=255)
cGGACCGCAGCTTCCTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCCGCGCCgg < 2:3858368/101‑1 (MQ=255)
ggACCGCAGCTTCCTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCCGCGCCGGa > 1:3194132/1‑101 (MQ=255)
ggACCGCAGCTTCCTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCCGCGCCGGa < 2:413088/101‑1 (MQ=255)
ggACCGCAGCTTCCTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCCGCGCCGGa > 2:1624017/1‑101 (MQ=255)
cGCGGCTTCCCGACGCCGCGATGAGCGCGGGATCGGAAACCGGGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCCGCGCCGGAAATg < 1:2177196/101‑1 (MQ=255)
cGCAGCTTCCTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCCGCGCCGGAAATg > 1:3526079/1‑101 (MQ=255)
catcgtCCTGACGCCGCGTTGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCCGCGCCGGAAATGCt < 2:1065711/96‑1 (MQ=255)
cTTCCTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCCGCGCCGGAAATGCTGGt > 1:3212388/1‑101 (MQ=255)
ttCCTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCCGCGCCGGAAATGCTGGTc > 1:3288238/1‑101 (MQ=255)
ttCCTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCCGCGCCGGAAATGCTGGTc < 2:4570743/101‑1 (MQ=255)
ccTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCCGCGCCGGAAATGCTGGTCTg < 1:3579384/101‑1 (MQ=255)
ccTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCCGCGCCGGAAATGCTGGTCTg < 2:3193931/101‑1 (MQ=255)
ccTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCCGCGCCGGAAATGCTGGTCTg < 1:4134699/101‑1 (MQ=255)
cTGACGCCGCGATGAGCGCGGGATCTGAATCCGCGTGGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCCGCGCCGGAAATGCTGGTCTgc < 2:2930777/101‑1 (MQ=255)
cTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCCGCGCCGGAAATGCTGGTCTgc > 1:2788051/1‑101 (MQ=255)
cTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCCGCGCCGGAAATGCTGGTCTgc < 2:2220862/101‑1 (MQ=255)
cTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCCGCGCCGGAAATGCTGGTCTgc > 2:1249729/1‑101 (MQ=255)
tGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCCGCGCCGGAAATGCTGGTCTgcg > 2:21373/1‑101 (MQ=255)
gACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCCGCGCCGGAAATGCTGGTCTgcgc < 2:1975478/101‑1 (MQ=255)
gACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCCGCGCCGGAAATGCTGGTCTgcgc < 2:3008121/101‑1 (MQ=255)
aCGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCCGCGCCGGAAATGCTGGttctggcg < 2:4497314/101‑8 (MQ=255)
cgcgATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCCGCGCCGGAAATGCTGGTCTGCGCGCTgg < 1:2367528/101‑1 (MQ=255)
gcgATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCCGCGCCGGAAATGCTGGTCTGCGCGCTGGa < 1:130103/101‑1 (MQ=255)
gcgATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCCGCGCCGGAAATGCTGGTCTGCGCGCTGGa < 1:137788/101‑1 (MQ=255)
ggaggAGCGCGGGATCTGAAACCGCGCTGAGCGGC.G.GG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCCGCGCCGGAAATGCTGGTCTGCGCGCTGGaa < 1:4397759/97‑1 (MQ=255)
cgATGAGCGCGGGATCTGAAACCGCGCTGGTC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCCGCGCCGGAAATGCTGGTCTGCGCGCTGGaa < 1:1731284/101‑1 (MQ=255)
cgATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCCGCGCCGGAAATGCTGGTCTGCGCGCTGGaa < 2:2707428/101‑1 (MQ=255)
cgATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCCGCGCCGGAAATGCTGGTCTGCGCGCTGGaa < 1:1436743/101‑1 (MQ=255)
gATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCCGCGCCGGAAATGCTGGTCTGCGCGCTGGAAg > 2:4642621/1‑101 (MQ=255)
gATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCCGCGCCGGAAATGCTGGTCTGCGCGCTGGAAg < 1:4204760/101‑1 (MQ=255)
aTGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCCGCGCCGGAAATGCTGGTCTGCGCGCTGGAAgg > 1:2930429/1‑101 (MQ=255)
tGAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCCGCGCCGGAAATGCTGGTCTGCGCGCTGGAAGGt > 2:2850522/1‑101 (MQ=255)
gAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCCGCGCCGGAAATGCTGGTCTGCGCGCTGGAAGGTc > 2:1476143/1‑101 (MQ=255)
gAGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCCGCGCCGGAAATGCTGGTCTGCGCGCTGGAAGGTc < 2:1639725/101‑1 (MQ=255)
gAGCGCGGGATCTGAAACCGCGCTGATC.GC.C.GGTGGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCCGCGCCGGAAATGCTGGTCTGCGCGCTGGAAGGTc < 1:4102573/101‑1 (MQ=255)
aGCGCGGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCCGCGCCGGAAATGCTGGTCTGCGCGCTGGAAGGTCa < 2:3451565/101‑1 (MQ=255)
cgcgGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTTCTTTTGCAGGCCGCGCCGGAAATGCTGGTCTGCGCGCTGGAAGGTCAGc < 2:3029287/101‑1 (MQ=255)
cgGGATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCCGCGCCGGAAATGCTGGTCTGCGCGCTGGAAGGTCAGccc < 2:918472/101‑1 (MQ=255)
ggATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCCGCCGGGGCTGCTTTTGCAGGCCGCGCCGGAAATGCTGGTCTGCGCGCTGGAAGGTGAGCCcgc > 2:388489/1‑101 (MQ=255)
gATCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCCGCGCCGGAAATGCTGGTCTGCGCGCTGGAAGGTCAGCCcgcg < 1:1641296/101‑1 (MQ=255)
tCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCCGCGCCGGAAATGCTGGTCTGCGCGCTGGAAGGTCAGCCCGCGcc > 1:4640169/1‑101 (MQ=255)
tCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCCGCGCCGGAAATGCTGGTCTGCGCGCTGGAAGGTCAGCCCGCGcc > 2:415552/1‑101 (MQ=255)
tCTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCCGCGCCGGAAATGCTGGTCTGCGCGCTGGAAGGTCAGCCCGCGcc > 2:2939528/1‑101 (MQ=255)
cTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGGGCTGCCGGGGCTGCTTTTGCAGGCCGCGCCGGAAATGCTGGTCTGCGCGCTGGAAGGTCaagatcggaaa > 1:2903096/1‑91 (MQ=255)
cTGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCCGCGCCGGAAATGCTGGTCTGCGCGCTGGAAGGTCAGCCCGCGCCg > 2:1841374/1‑101 (MQ=255)
tGAAACCGCGCTGATC.GC.CGGG.GGG.GGGGCGCTGCCGGGGCTGCTTTTGCAGGCCGCGCCGGAAATGCTGGTCTGCGCGCTGGAAGGTCAGCCCGCGCCgg > 1:3676259/1‑101 (MQ=255)
tGAAACCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCCGCGCCGGAAATGCTGGTCTGCGCGCTGGAAGGTCAGCCCGCGCCgg > 1:3956289/1‑101 (MQ=255)
aaaCCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCCGCGCCGGAAATGCTGGTCTGCGCGCTGGAAGGTCAGCCCGCGCCGGGc > 2:241907/1‑101 (MQ=255)
aCCGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCCGCGCCGGAAATGCTGGTCTGCGCGCTGGAAGGTCAGCCCGCGCCGGGCgg < 2:1425656/101‑1 (MQ=255)
ccGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCCGCGCCGGAAATGCTGGTCTGCGCGCTGGAAGGTCAGCCCGCGCCGGGCGGa < 2:2605525/101‑1 (MQ=255)
ccGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCCGCGCCGGAAATGCTGGTCTGCGCGCTGGAAGGTCAGCCCGCGCCGGGCGGa > 2:1248659/1‑101 (MQ=255)
ccGCGCTGATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCCGCGCCGGAAATGCTGGTCTGCGCGCTGGAAGGTCAGCCCGCGCCGGGCGGa > 2:2763631/1‑101 (MQ=255)
gcgcTGATC.GCGG.GG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCCGCGCCGGAAATGCTGGTCTGCGCGCTGGAAGGTCAGCCCGCGCCGGGCGGATc < 1:2671448/101‑1 (MQ=255)
gATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCCGCGCCGGAAATGCTGGTCTGCGCGCTGGAAGGTCAGCCCGCGCCGGGCGGATCGGtgc < 1:2299755/101‑1 (MQ=255)
gATC.GC.CGGG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCCGCGCCGGAAAAGCTGGTCTGCGCGCTGGAAGGTCAGCCCGCGCCGGGCGGCTCGGtcc > 2:2195790/1‑99 (MQ=255)
|
AGCCGCCACGTCCGCGAAGTGCTTGATTTCATTCTTGGTCCCTCGGACCGCAGCTTCCTGACGCCGCGATGAGCGCGGGATCTGAAACCGCGCTGATC.GC.C.GG.GGG.GGCGCGCTGCCGGGGCTGCTTTTGCAGGCCGCGCCGGAAATGCTGGTCTGCGCGCTGGAAGGTCAGCCCGCGCCGGGCGGATCGGTGCT > NC_014034/1768802‑1768996
Base quality scores:
ATCG
< 3 ≤
ATCG
< 19 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|