| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,925,099 | +C | 98.1% | intergenic (+39/+6) | RCAP_rcc01778 → / ← RCAP_rcc01779 | hypothetical protein/MazG family protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,925,099 | 1 | .→C | 98.1% | 4.5 ‑4.6 ‑0.4 | 206 | intergenic (+39/+6) | RCAP_rcc01778/RCAP_rcc01779 | hypothetical protein/MazG family protein |
| Reads supporting (aligned to +/- strand): new base (139/63): ref base (0/4): total (139/67) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.05e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 4.22e-01 | ||||||||||
Only 100 of 236 total aligned reads displayed.
GCCTCTTCGCAGGGTTTCTGATGCTGGTCGCGCTGAACATGCTGCGCAAGGCGCTGTTCTGATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.G.CC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAGCGCGTCCATCTCGGCCAGATCGCTGTCGGCGGGCCGCTTGCCGGCCTTCGCCAGTTC > NC_014034/1924999‑1925194
|
ccTCTTCGCAGGGTTTCTGATGCTGGTCGCGCTGAACATGCTGCGCAAGGCGCTGTTCTGATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.G.c > 1:1812479/1‑101 (MQ=255)
ccTCTTCGCAGGGTTTCTGATGCTGGTCGCGCTGAACATGCTGCGCAAGGCGCTGTTCTGATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.G.c > 2:4565619/1‑101 (MQ=255)
tctTCGCAGGGTTTCTGATGCTGGTCGCGCTGAACATGCTGCGCAAGGCGCTGTTCTGATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.G.cc.c < 2:3058765/101‑1 (MQ=255)
cGCAGGGTTTCTGATGCTGGTCGCGCTGAACATGCTGCGCAAGGCGCTGTTCTGATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.G.cc.ccgcc > 2:3973807/1‑97 (MQ=255)
cGCAGGGTTTCTGATGCTGGTCGCGCTGAACATGCTGCGCAAGGCGCTGTTCTGATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.G.cc.ccgcc > 1:3941203/1‑97 (MQ=255)
cGCAGGGTTTCTGATGCTGGTCGCGCTGAACATGCTGCGCAAGGCGCTGTTCTGATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.G.cc.ccgcc > 1:3753850/1‑97 (MQ=255)
cGCAGGGTTTCTGATGCTGGTCGCGCTGAACATGCTGCGCAAGGCGCTGTTCTGATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.G.cc.ccgcc > 2:2397589/1‑97 (MQ=255)
cGCAGGGTTTCTGATGCTGGTCGCGCTGAACATGCTGCGCAAGGCGCTGTTCTGATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.G.cc.ccgcc > 1:3028835/1‑97 (MQ=255)
cGCAGGGTTTCTGATGCTGGTCGCGCTGAACATGCTGCGCAAGGCGCTGTTCTGATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.G.cc.ccgcc > 1:79159/1‑97 (MQ=255)
cAGGGTTTCTGATGCTGGTCGCGCTGAACATGCTGCGCAAGGCGCTGTTCTGATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTa < 1:3551107/101‑1 (MQ=255)
cAGGGTTTCTGATGCTGGTCGCGCTGAACATGCTGCGCAAGGCGCTGTTCTGATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTa < 1:555958/101‑1 (MQ=255)
aGGGTTTCTGATGCTGGTCGCGCTGAACATGCTGCGCAAGGCGCTGTTCTGATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTAc > 2:3693512/1‑101 (MQ=255)
gggTTTCTGATGCTGGTCGCGCTGAACATGCTGCGCAAGGCGCTGTTCTGATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACa > 1:3620054/1‑101 (MQ=255)
gggTTTCTGATGCTGGTCGCGCTGAACATGCTGCGCAAGGCGCTGTTCTGATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACa < 1:244654/101‑1 (MQ=255)
gggTTTCTGATGCTGGTCGCGCTGAACATGCTGCGCAAGGCGCTGTTCTGATTTTATCTTGCGGCAAATACCCCGGGGGGCGGGGCA.GA.GCCC.CGCCTACa < 2:3316753/101‑1 (MQ=38)
gggTTTCTGATGCTGGTCGCGCTAAACATGCTGCGCAAGGCGCTGTTCTGATTTTATCTTGCGGCAAATACCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACa < 1:4225252/101‑1 (MQ=38)
tttCTGATGCTGGTCGCGCTGAACATGCTGCGCAAGGCGCTGTTCTGATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGcc > 1:4503530/1‑101 (MQ=255)
tCTGATGCTGGTCGCGCTGAACATGCTGCGCAAGGCGCTGTTCTGATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGcccc > 1:2872867/1‑101 (MQ=255)
cTGATGCTGGTCGCGCTGAACATGCTGCGCAAGGCGCTGTTCTGATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCt > 2:2839769/1‑101 (MQ=255)
aagATGCCGATCGCGCTGAACATGCTGCGCAAGGCGCTGTTCTGATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCt > 2:1187219/3‑101 (MQ=37)
tGATGCTGGTCGCGCTGAACATGCTGCGCAAGGCGCTGTTCTGATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCtt < 1:591894/101‑1 (MQ=255)
tGATGCTGGTCGCGCTGAACATGCTGCGCAAGGCGCTGTTCTGATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCtt < 2:3832192/101‑1 (MQ=255)
tGATGCTGGTCGCGCTGAACATGCTGCGCAAGGCGCTGTTCTGATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCtt < 2:4677116/101‑1 (MQ=255)
tGATGCTGGTCGCGCTGAACATGCTGCGCAAGGCGCTGTTCTGATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCtt < 2:2287515/101‑1 (MQ=255)
tGATGCTGGTCGCGCTGAACATGCTGCGCAAGGCGCTGTTCTGATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCtt < 2:3094424/101‑1 (MQ=255)
tGATGCTGGTCGCGCGTAACATGCTGCGAAAGGCGTTGTTCTGATTTTATCTTGCGGAAAATACCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCtt < 2:4270795/101‑1 (MQ=25)
gATGCTGGTCGCGCTGAACATGCTGCGCAAGGCGCTGTTCTGATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCtta > 1:4677372/1‑100 (MQ=255)
gATGCTGGTCGCGCTGAACATGCTGCGCAAGGCGCTGTTCTGATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTg > 1:1877446/1‑101 (MQ=255)
caTGCTGGTCGCGCTGAACATGCTGCGCAAGGCGCTGTTCTGATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTg > 1:1038482/2‑101 (MQ=255)
gtGGCCGCGCTGAACATGCTGCGCAAGGCGCTGTTCTGATTTTATCTTGCGGCTAATACCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCt < 2:4107241/100‑1 (MQ=38)
cTGGTCGCGCTGAACATGCTGCGCAAGGCGCTGTTCTGATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCt > 1:1552831/1‑101 (MQ=255)
cTGGTCGCGCTGAACATGCTGCGCAAGGCGCTGTTCTGATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCt > 2:1033653/1‑101 (MQ=255)
tGGTCGCGCTGAACATGCTGCGCAAGGCGCTGTTCTGATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCtt > 1:4652565/1‑101 (MQ=255)
ggTCGCGCTGAACATGCTGCGCAAGGCGCTGTTCTGATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTg > 2:1963418/1‑101 (MQ=255)
tCGCGCTGAACATGCTGCGCAAGGCGCTGTTCTGATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGc > 2:1635856/1‑101 (MQ=255)
cgcgCTGAACATGCTGCGCAAGGCGCTGTTCTGATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGcc < 2:2156192/101‑1 (MQ=255)
gcTGAACATGCTGCGCAAGGCGCTTTTCTGTTTTTATCTTGCGGCAAATACCCGGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCa < 1:4418506/101‑1 (MQ=37)
cTGAACATGCTGCGCAAGGCGCTGTTCTGATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCAt > 1:1607681/1‑101 (MQ=255)
tGAACATGCTGCGCAAGGCGCTGTTCTGATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATc > 1:2097187/1‑101 (MQ=255)
aaCATGCTGCGCAAGGCGCTGTTCTGATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATccc > 1:1229942/1‑101 (MQ=255)
tgctgcGCAAGGCGCTGTTCTGATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAg > 1:292644/1‑101 (MQ=255)
ctgcGCAAGGCGCTGTTCTGATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAgcg > 1:1665084/1‑101 (MQ=255)
tgcGCAGGGGGCTGTTCTGTTTTTCTCTTGCGGCAAAGAGCCGGGGCGGGGGGCCA.GACC.CC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAgcgc < 2:3940961/101‑1 (MQ=255)
tgcGCAAGGCGCTGTTCTGATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAgcgc > 1:3532809/1‑101 (MQ=255)
cgcAAGGCGCTGTTCTGATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAGcgcgc > 2:1486381/1‑100 (MQ=255)
gcAAGGCGCTGTTCTGATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAGCGCGTc > 1:998213/1‑101 (MQ=255)
gcAAGGCGCTGTTCTGATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATACCAAAGCGCGTc > 2:4535215/1‑101 (MQ=255)
cagggCGCTGTTCTGATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAGCGCGTcc < 1:3126295/98‑1 (MQ=255)
cAAGGCGCTGTTCTGATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAGCGCGTcc > 2:259066/1‑101 (MQ=255)
aaGGCGCTGTTCTGATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAGCGCGTCCa < 1:1377866/101‑1 (MQ=255)
aGGCGCTGTTCTGATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAGCGCGTCCAt > 2:3495970/1‑101 (MQ=255)
ggCGCTGTTCTGATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAGCGCGTCCAtc < 2:585365/101‑1 (MQ=255)
cgcTGTTCTGATTTTATCTTGCGGCAAATATCCGGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAGCGCGTCCAtctc < 2:2108628/101‑1 (MQ=255)
gcTGTTCTGATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAGCGCGTCCATCTCg > 1:1499372/1‑101 (MQ=255)
cTGTTCTGATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGGCGCATCCCAAAGCGCGTCCATCTCgg > 1:3984613/1‑101 (MQ=255)
tGTTCTGATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAGCGCGTCCATCTCGGc > 2:1845988/1‑101 (MQ=255)
gTTCTGATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAGCGCGTCCATCTCGGcc < 2:264100/101‑1 (MQ=255)
gTTCGGATTTTATCTTGCGGCAAATATCCGGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAGCGCGTCCATCTCGGcc < 2:289957/101‑1 (MQ=38)
ttCTGATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAGCGCGTCCATCTCGGCCa > 2:867373/1‑101 (MQ=255)
ttCTGATTTTATCTTGCGGCAAATATCCCGGGGGGCGGGGCA.AA.G.CCGCGCCTACACCCCCTTGCGCTTGTCCGCATCCCAAAGCGCGTCCATCTNCGCCa > 1:1026098/1‑101 (MQ=38)
tgtttttATTTGGCGGAAAATACCCGGGGGGGGGGGGCAGGC.C.CC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAGCGCGTCCATCTCGGCCAGAt < 1:3897608/98‑1 (MQ=255)
tGATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAGCGCGTCCATCTCGGCCAGAt < 2:773813/101‑1 (MQ=255)
gATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAGCGCGTCCATCTCGGCCAGATc < 1:1209590/101‑1 (MQ=255)
gATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAGCGCGTCCATCTCGGCCAGATc > 1:4549659/1‑101 (MQ=255)
gATTTTATCTCGCGGCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAGCGCGTCCATCTCGGCCAGATc < 2:3562186/101‑1 (MQ=255)
ttttATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAGCGCGTCCATCTCGGCCAGATCGc > 2:1512897/1‑101 (MQ=255)
ttttATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAGCGCGTCCATCTCGGCCAGATCGc > 1:3237252/1‑101 (MQ=255)
tttATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAGCGCGTCCATCTCGGCCAGATCGCt > 1:3388119/1‑101 (MQ=255)
tttATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAGCGCGTCCATCTCGGCCAGATCGCt > 1:1748248/1‑101 (MQ=255)
ttATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAGCGCGTCCATCTCGGCCAGATCGCTg > 1:2736841/1‑101 (MQ=255)
tATCTTGCTGCAAATATCCCGGGGTGCGGGGCA.GG.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAGCGCGTCCATCTCGGCCAGATCGCTGt < 2:3753615/101‑1 (MQ=38)
cTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAGCGCGTCCATCTCGGCCAGATCGCTGTcgg > 1:299547/1‑101 (MQ=255)
tGCGGCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAGCGCGTCCATCTCGGCCAGATCGCTGTcggcg < 1:2208607/101‑1 (MQ=255)
gCGGCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAGCGCGTCCATCTCGGCCAGATCGCTGTcggcgg > 2:2333722/1‑101 (MQ=255)
gCGGCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAGCGCGTCCATCTCGGCCAGATCGCTGTcggcgg > 2:3843797/1‑101 (MQ=255)
ggCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAGCGCGTCCATCTCGGCCAGATCGCTGTCGGCGGGc > 1:498433/1‑101 (MQ=255)
gCAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAGCGCGTCCATCTCGGCCAGATCGCTGTCGGCGGGcc > 2:1612354/1‑101 (MQ=255)
cAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAGCGCGTCCATCTCGGCCAGATCGCTGTCGGCGGGccc > 2:1335621/1‑100 (MQ=255)
cAAATATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAGCGCGTCCATCTCGGCCAGATCGCTGTCGGCGGGCCg > 2:1414845/1‑101 (MQ=255)
aaaTATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAGCGCGTCCATCTCGGCCAGATCGCTGTCGGCGGGCCGc > 1:1155702/1‑101 (MQ=255)
aaaTATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAGCGCGTCCATCTCGGCCAGATCGCTGTCGGCGGGCCGc > 1:2402760/1‑101 (MQ=255)
aaaTATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAGCGCGTCCATCTCGGCCAGATCGCTGTCGGCGGGCCGc > 1:689130/1‑101 (MQ=255)
aaaTATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAGCGCGTCCATCTCGGCCAGATCGCTGTCGGCGGGCCGc > 2:3013303/1‑101 (MQ=255)
aaaTATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAGCGCGTCCATCTCGGCCAGATCGCTGTCGGCGGGCCGc > 2:3357133/1‑101 (MQ=255)
aatcccccGGGGGGGGGGGCAGGC.C.CC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAGCGCGTCCATCTCGGCCAGATCGCTGTCGGCGGGCCGCt < 1:4304991/96‑1 (MQ=255)
aaTATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAGCGCGTCCATCTCGGCCAGATCGCTGTCGGCGGGCCGCt > 1:1907989/1‑101 (MQ=255)
aaTATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAGCGCGTCCATCTCGGCCAGATCGCTGTCGGCGGGCCGCt > 2:4379771/1‑101 (MQ=255)
aaTATCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAGCGCGTCCATCTCGGCCAGATCGCTGTCGGCGGGCCGCt > 2:2694214/1‑101 (MQ=255)
atatCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAGCGCGTCCATCTCGGCCAGATCGCTGTCGGCGGGCCGCtt > 1:3474906/1‑101 (MQ=255)
tatCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAGCGCGTCCATCTCGGCCAGATCGCTGTCGGCGGGCCGCTTg < 2:4598917/101‑1 (MQ=255)
atCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAGCGCGTCCATCTCGGCCAGATCGCTGTCGGCGGGCCGCCTGc > 2:1139896/1‑101 (MQ=255)
tCCCGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAGCGCGTCCATCTCGGCCAGATCGCTGTCGGCGGGCCGCTTGcc > 2:214340/1‑101 (MQ=255)
ccGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAGCGCGTCCATCTCGGCCAGATCGCTGTCGGCGGGCCGCTTGCCgg > 1:881333/1‑101 (MQ=255)
ccGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAGCGCGTCCATCTCGGCCAGATCGCTGTCGGCGGGCCGCTTGCCgg > 1:36910/1‑101 (MQ=255)
cGGGGTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAGCGCGTCCATCTCGGCCAGATCGCTGTCGGCGGGCCGCTTGCCGGc > 2:3897096/1‑101 (MQ=255)
ggggTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAGCGCGTCCATCTCGGCCAGATCGCTGTCGGCGGGCCGCTTGCCGGcc > 1:2541357/1‑101 (MQ=255)
gggTGCGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAGCGCGTCCATCTCGGCCAGATCGCTGTCGGCGGGCCGCTTGCCGGCCt > 1:2294494/1‑101 (MQ=255)
gggCGGGGCA.GACC.CC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAGCGCGTCCATCTCGGCCAGATCGCTGTCGGCGGGCCGCTTGCCGGCCTTc < 1:3844032/99‑1 (MQ=255)
cGGGGCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAGCGCGTCCATCTCGGCCAGATCGCTGTCGGCGGGCCGCTTGCCGGCCTTCGcc > 2:198656/1‑101 (MQ=255)
gggCA.GA.GCCC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAGCGCGTCCATCTCGGCCAGATCGCTGTCGGCGGGCCGCTTGCCGGCCTTCGCCAg > 2:67453/1‑101 (MQ=255)
|
GCCTCTTCGCAGGGTTTCTGATGCTGGTCGCGCTGAACATGCTGCGCAAGGCGCTGTTCTGATTTTATCTTGCGGCAAATATCCCGGGGTGCGGGGCA.GA.G.CC.CGCCTACAGCCCCTTGCGCTTGGCCGCATCCCAAAGCGCGTCCATCTCGGCCAGATCGCTGTCGGCGGGCCGCTTGCCGGCCTTCGCCAGTTC > NC_014034/1924999‑1925194
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|