Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_014034 | 2,185,841 | +C | 93.5% | intergenic (+114/‑391) | mtlK → / → RCAP_rcc02028 | mannitol 2‑dehydrogenase/FeoA family protein |
Read alignment evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | NC_014034 | 2,185,841 | 1 | .→C | 93.5% | 11.6 0.0 ‑0.7 | 92 | intergenic (+114/‑391) | mtlK/RCAP_rcc02028 | mannitol 2‑dehydrogenase/FeoA family protein |
Reads supporting (aligned to +/- strand): new base (14/72): ref base (1/5): total (15/77) | ||||||||||
Fisher's exact test strand distribution p-value = 1.00e+00 | ||||||||||
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.92e-01 |
Only 100 of 108 total aligned reads displayed.
CGCCCCGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.G.C.CCCGCACCCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTGTTTTTGATGGCACAAGAAACGCCGAACCGCCCCTTTC > NC_014034/2185742‑2185938
|
cGCCCCGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.G.c < 2:1544956/101‑1 (MQ=255)
cGCCCCGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.G.c < 1:3372238/101‑1 (MQ=255)
ccccGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.G.c.cc < 1:2449343/101‑1 (MQ=255)
ccGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.G.c.cccc < 2:1480524/101‑2 (MQ=255)
ggAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATTTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGGGCCTC.CCG.GGGGTCC.G.CGCCCGc > 2:3820567/1‑101 (MQ=255)
ggAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGGTCC.G.c.ccccgc > 2:4513498/1‑98 (MQ=255)
gAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCCGG.GGGGGCC.G.c.cccccc > 1:3087242/1‑98 (MQ=255)
gAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCCGTGCCGAGGCGACCCTG.CCG.GGGGCAC.G.c.ccccccc > 1:3757344/1‑97 (MQ=255)
aaCAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.G.c.ccccgcac < 2:4693812/101‑6 (MQ=255)
aaCAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.G.c.ccccgcac < 1:616825/101‑6 (MQ=255)
aaCAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.G.c.ccccgcac < 1:2338754/101‑6 (MQ=255)
aCAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCAcc < 2:2449820/101‑1 (MQ=255)
aGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCAcccc < 1:1080096/101‑1 (MQ=255)
ggcggcCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCAccccc < 2:3941452/101‑1 (MQ=255)
ggcggcCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCAccccc < 2:1217429/101‑1 (MQ=255)
gcggcCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCAcccccg < 1:2322905/101‑2 (MQ=255)
ggcCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTG.GGGTGGGGGGC.G.C.CCCCCCcccccccc > 1:680517/1‑99 (MQ=255)
ggcCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCCAC.C.CCCGCAcccccggc < 2:2248099/101‑4 (MQ=39)
ggcCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCAcccccggc < 2:227892/101‑4 (MQ=255)
ggcACCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCAcccccggc < 2:654956/101‑4 (MQ=37)
gcCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCCGG.GGGGGCC.C.C.CCCCCCccccccccc > 1:4436721/1‑98 (MQ=255)
gcCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCCGG.GGGGGCC.C.C.CCCCCCccccccccc > 2:3785375/1‑98 (MQ=255)
cccGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTa < 2:666207/101‑1 (MQ=255)
ccGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTAt < 1:4528118/101‑1 (MQ=255)
gCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTAttt < 2:4096938/101‑1 (MQ=255)
gCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.G.C.CCCCGCCCCCCCGGCGTAttt < 1:1267867/101‑1 (MQ=255)
tccctcccGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTAt > 2:1024002/1‑101 (MQ=255)
ccctcccGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATc < 1:974526/101‑1 (MQ=255)
ccctcccGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATc > 2:3911772/1‑101 (MQ=255)
cctcccGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTT.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATcc < 2:4677483/101‑1 (MQ=25)
cccggggcgggGCCGCCTGATGTGCAAAGGGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCa < 2:1707162/97‑1 (MQ=25)
cccGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCaa > 1:1463535/1‑101 (MQ=255)
cccGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGGATTTATCCCaa > 2:1623519/1‑101 (MQ=37)
ccGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAg < 2:532529/101‑1 (MQ=255)
ggcgggGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGaaa < 2:1672038/101‑1 (MQ=255)
ggCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAagca < 1:3756377/101‑1 (MQ=255)
gccgccTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAagcag < 2:2758423/101‑1 (MQ=255)
gccgccTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAagcag > 2:274249/1‑101 (MQ=255)
gccTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCgg > 2:664844/1‑101 (MQ=255)
cTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCt < 2:3362085/101‑1 (MQ=255)
tGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCtt < 2:3145443/101‑1 (MQ=255)
tGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCtt < 1:3567629/101‑1 (MQ=255)
tGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCtt < 2:1053010/101‑1 (MQ=255)
gATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTg < 2:1479095/101‑1 (MQ=255)
aTGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGc < 2:769543/101‑1 (MQ=255)
aTGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGc < 1:1424328/101‑1 (MQ=255)
tggaacgCGTTTTCGCCGCGGCGGTGCCGAGGCGCCCCTG.CGG.GGGCTTC.G.C.CCCCGCTCCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGcccc < 1:1202855/95‑1 (MQ=25)
tgCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGcccc < 1:3049837/101‑1 (MQ=255)
gCAAAGCGGTTTCGCCTCGGCGGTGCGGAGGCGACCCTG.CGG.GTGCGCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCg < 2:3931737/101‑1 (MQ=37)
gCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCg < 2:3304896/101‑1 (MQ=255)
gCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCg < 2:680453/101‑1 (MQ=255)
aaggCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGaa < 2:908150/98‑1 (MQ=37)
aaaGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGaa < 1:68212/101‑1 (MQ=255)
aaaGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCCaa > 1:301161/1‑101 (MQ=37)
aaGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAg < 1:511413/101‑1 (MQ=255)
aaGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAg < 1:520657/101‑1 (MQ=255)
aGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAgg < 1:4518337/101‑1 (MQ=255)
aGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAgg < 2:2272206/101‑1 (MQ=255)
ggTTTCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGGCCCGAAGGCCt > 1:589217/1‑101 (MQ=37)
tttCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTg < 1:4635255/101‑1 (MQ=255)
tttCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTg < 1:866747/101‑1 (MQ=255)
tttCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.G.CACCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGAAGCGGCTTGCCCCGAAGGCCTTg < 1:3820802/101‑1 (MQ=38)
ttCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTGt < 2:3002683/101‑1 (MQ=255)
tCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTGtt < 1:1098053/101‑1 (MQ=255)
gCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTGtttt < 2:4436471/101‑1 (MQ=255)
tCGGCGGTGCCGAGGCGACCCTG.CGG.GGGTTCC.G.C.CCCCCGACCCCCGGCGTATTTATCCCAAGAAAAAGCCGCGGCTTTCCCCCCAAGACTTGttttgat > 2:2433192/1‑98 (MQ=25)
tCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTGttttgat < 1:2828104/101‑4 (MQ=37)
cggcggTGCCGAGGCGCCCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTGttttgatg < 2:4168416/101‑5 (MQ=37)
gcggTGCCGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGc < 2:3757109/101‑1 (MQ=37)
gcggTGCCGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGc < 1:2031705/101‑1 (MQ=37)
gcggTGCCGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGc < 2:2369221/101‑1 (MQ=37)
cggTGCCGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGca < 1:3785610/101‑1 (MQ=37)
gTGCCGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGcaca < 1:150253/101‑1 (MQ=37)
tGCCGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACaa < 2:3453478/101‑1 (MQ=37)
ccGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGa < 1:1271777/101‑1 (MQ=37)
ccGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGa < 2:3550323/101‑1 (MQ=37)
cgggccGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGaa < 1:6243/96‑1 (MQ=25)
cGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTTCCCCGAAGGGCTTG.TTTTGATGGCACAAGaa > 2:366452/1‑101 (MQ=25)
cGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGaa < 1:145079/101‑1 (MQ=37)
cGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGaa < 1:1133577/101‑1 (MQ=37)
cGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGaa < 1:3757199/101‑1 (MQ=37)
cGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGaa < 2:1957172/101‑1 (MQ=37)
cGAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGaa < 1:2720896/101‑1 (MQ=37)
gAGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGaaa < 1:1826079/101‑1 (MQ=37)
aGGCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTGTTTTT.ATGGCACAAAAAAc > 1:1673945/1‑101 (MQ=25)
aGGCGACCCTG.CGG.GGGCTCC.G.C.CCCCGCTCCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAAc < 1:1536581/101‑1 (MQ=37)
ggCGACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACg < 2:4201838/101‑1 (MQ=37)
ggCGACCCTG.CGG.GGGCTCC.G.C.CCCCGCCCCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACg < 2:4295714/101‑1 (MQ=37)
gACCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCCAAGGCCGTG.TTTTGATGGCACAAGAAACGCCg > 2:2572122/1‑101 (MQ=25)
aCCCTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGa < 1:2835365/101‑1 (MQ=37)
ccTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAAc < 1:1285674/101‑1 (MQ=37)
cTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAAcc < 1:3076012/101‑1 (MQ=37)
cTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAAcc > 2:384652/1‑101 (MQ=37)
cTG.CGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAAcc < 1:4276087/101‑1 (MQ=37)
cGG.GGGCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCGcc < 2:3452597/101‑1 (MQ=37)
gg.gggCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCCAACCGccc > 2:1462133/1‑101 (MQ=37)
gCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCGCCCCctt < 2:2433821/101‑1 (MQ=37)
gCTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCGCCCCctt < 1:1979636/101‑1 (MQ=37)
cTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCGCCCCcttt < 2:4077923/101‑2 (MQ=37)
cTCC.GCC.CCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCGCCCCcttt < 1:1960695/101‑2 (MQ=37)
|
CGCCCCGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTG.CGG.GGGCTCC.G.C.CCCGCACCCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTGTTTTTGATGGCACAAGAAACGCCGAACCGCCCCTTTC > NC_014034/2185742‑2185938
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|