Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_014034 2,256,434 +C 100% intergenic (+902/+1567) RCAP_rcc02088 → / ← RCAP_rcc02095 IS3 family transposase/hypothetical protein

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0140342,256,4341.→C100.0% 774.7 209intergenic (+902/+1567)RCAP_rcc02088/RCAP_rcc02095IS3 family transposase/hypothetical protein
Reads supporting (aligned to +/- strand):  new base (89/118):  ref base (1/1):  total (90/119)

Only 100 of 229 total aligned reads displayed.

GCGTCATCGGCGACTGGATCGTTCGGCCGCTCTCTCGGACCCATGGCGATCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGGGC.G.ACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGATTCAGATGGGGCAATACACGCTCGGCATGTTGCCCGCCACGGCCCGGT  >  NC_014034/2256334‑2256525
                                                                                                      |                                                                                           
  gTCATCGGCGACTGGATCGTTCGGCCGCTCTCTCGGACCCATGGCGATCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.gca                                                                                            <  1:903619/101‑3 (MQ=255)
   tCATCGGCGACTGGATCGTTCGGCCGCTCTCTCGGACCCATGGCGATCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.gcac                                                                                           >  1:2490464/1‑98 (MQ=255)
    cATCGGCGACTGGATCGTTCGGCCGCTCTCTCGGACCCATGGCGATCGCGGCCTCACTCAACAACCCCCGCCGCCCTCATCAGGCCCTTGCCGTGC.gcacg                                                                                          >  2:1391995/1‑97 (MQ=255)
      tCGGCGACTGGATCGTTCGGCCGCTCTCCCGGACCCATGGGGACCCGGGCCACGTTCAAAAACCCCCACCGCCCTCCCCAGGCCCTAGCCTGCC.G.CCGccg                                                                                       >  1:4684522/1‑100 (MQ=255)
         gCGACTGGATCGTTCGGCCGCTCTCTCGGACCCATGGCGATCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGt                                                                                     <  2:2997260/101‑1 (MQ=255)
          cGACTGGATCGTTCGGCCGCTCTCTCGGACCCATGGCGATCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTc                                                                                    <  2:216294/101‑1 (MQ=255)
           gACTGGATCGTTCGGCCGCTCTCTCGGACCCATGGCGATCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCg                                                                                   >  1:192437/1‑101 (MQ=255)
           gACTGGATCGTTCGGCCGCTCTCTCGGACCCATGGCGATCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCg                                                                                   >  2:1793260/1‑101 (MQ=255)
            aCTGGATCGTTCGGCCGCTCTCTCGGACCCATGGCGATCGCGGCCTCACTCAACAACCCCCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGa                                                                                  <  2:596725/101‑1 (MQ=255)
            aCTGGATCGTTCGGCCGCTCTCTCGGACCCATGGCGATCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGa                                                                                  <  2:2467387/101‑1 (MQ=255)
             cTGGATCGTTCGGCCGCTCTCTCGGACCCATGGCGATCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAg                                                                                 <  2:3369428/101‑1 (MQ=255)
              tGGATCGTTCGGCCGCTCTCTCGGACCCATGGCGATCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAgg                                                                                >  1:3474376/1‑101 (MQ=255)
              tGGATCGTTCGGCCGCTCTCTCGGACCCATGGCGATCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAgg                                                                                >  2:366135/1‑101 (MQ=255)
              tGGATCGTTCGGCCGCTCTCTCGGACCCATGGCGATCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAgg                                                                                >  2:2798490/1‑101 (MQ=255)
               ggATCGTTCGGCCGCTCTCTCGGACCCATGGCGATCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGc                                                                               <  1:4230270/101‑1 (MQ=255)
               ggATCGTTCGGCCGCTCTCTCGGACCCATGGCGATCGCGGCCACACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGc                                                                               >  2:2425692/1‑101 (MQ=255)
                gATCGTTCGGCCGCTCTCTCGGACCCATGGCGATCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCa                                                                              <  2:392463/101‑1 (MQ=255)
                  tCGTTCGGCCGCTCTCTCGGACCCATGGCGATCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCAtt                                                                            <  2:2634392/101‑1 (MQ=255)
                   cGTTCGGCCGCTCTCTCGGACCCATGGCGATCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTc                                                                           <  1:16919/101‑1 (MQ=255)
                   cGTTCGGCCGCTCTCTCGGACCCATGGCGATCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTc                                                                           >  1:3121992/1‑101 (MQ=255)
                    gTTCGGCCGCTCTCTCGGACCCATGGCGATCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCa                                                                          <  1:545243/101‑1 (MQ=255)
                     ttCGGCCGCTCTCTCGGACCCATGGCGATCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAg                                                                         >  1:1563871/1‑101 (MQ=255)
                        ggCCGCTCTCTCGGCCCCATGGCGATCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGAtt                                                                      <  1:2160115/101‑1 (MQ=255)
                        ggCCGCTCTCTCGGACCCATGGCGATCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGAtt                                                                      <  2:2945484/101‑1 (MQ=255)
                        ggCCGCTCTCTCGGACCCATGGCGATCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGAtt                                                                      <  2:2503571/101‑1 (MQ=255)
                         gCCGCTCTCTCGGACCCATGGCGATCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTa                                                                     <  1:2555577/101‑1 (MQ=255)
                          ccGCTCTCTCGGACCCATGGCGATCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAg                                                                    >  1:1069720/1‑101 (MQ=255)
                              tctctcGGACCCATGGCGATCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGc                                                                >  2:3054758/1‑101 (MQ=255)
                               ctctcGGACCCATGGCGATCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCt                                                               >  2:2691394/1‑101 (MQ=255)
                                 ctcGGACCCATGGCGATCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGCAC.ACGCCTGTCGAGGCATTCAGATTAGCGGCTTa                                                             >  1:2870334/1‑101 (MQ=255)
                                 ctcGGACCCATGGCGATCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTa                                                             <  1:4148800/101‑1 (MQ=255)
                                  tcGGACCCATGGCGATCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTaa                                                            <  1:945362/101‑1 (MQ=255)
                                   cGGACCCATGGCGATCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAAc                                                           >  1:3747678/1‑101 (MQ=255)
                                   cGGACCCATGGCGATCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAAc                                                           >  2:3533951/1‑101 (MQ=255)
                                    ggACCCATGGCGATCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACt                                                          <  2:408933/101‑1 (MQ=255)
                                    ggACCCATGGCGATCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACt                                                          <  2:3564734/101‑1 (MQ=255)
                                    ggACCCATGGCGATCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGAGGCTTAACt                                                          >  2:3814713/1‑101 (MQ=255)
                                    ggACCCATGGCGATCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAACGGCTTAACt                                                          >  1:2983516/1‑101 (MQ=255)
                                     gACCCATGGCGATCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACtt                                                         <  2:1645084/101‑1 (MQ=255)
                                         cATGGCGATCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGc                                                     <  2:1255276/101‑1 (MQ=255)
                                           tgtcGATCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAg                                                   >  1:2716232/4‑101 (MQ=255)
                                           tGGCGATCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAg                                                   <  1:4312642/101‑1 (MQ=255)
                                           tGGCGATCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAg                                                   <  1:2798655/101‑1 (MQ=255)
                                            ggCGATCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGa                                                  <  1:2946585/101‑1 (MQ=255)
                                            ggCGATCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGa                                                  <  1:1793369/101‑1 (MQ=255)
                                            ggCGATCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGa                                                  <  2:547869/101‑1 (MQ=255)
                                             gCGATCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGAt                                                 <  2:783190/101‑1 (MQ=255)
                                             gCGATCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGAt                                                 <  1:1209008/101‑1 (MQ=255)
                                             gCGATCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGAt                                                 <  1:3694651/101‑1 (MQ=255)
                                               gATCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGATTc                                               <  2:4395118/101‑1 (MQ=255)
                                               gATCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGATTc                                               <  2:1503645/101‑1 (MQ=255)
                                               gATCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGATTc                                               <  1:2287416/101‑1 (MQ=255)
                                               gATCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGATTc                                               <  2:3177609/101‑1 (MQ=255)
                                               gATCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGATTc                                               >  1:4621653/1‑101 (MQ=255)
                                               gATCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGATTc                                               <  1:4038170/101‑1 (MQ=255)
                                               gATCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGATTc                                               <  1:3973363/101‑1 (MQ=255)
                                               gATCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTACCGGCTTAACTTGAGCAGATTc                                               >  1:4004728/1‑101 (MQ=255)
                                                aTCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGTTTCa                                              >  2:3069708/1‑101 (MQ=255)
                                                  cgcgGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGCAC.ACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGATTCAGa                                            <  2:2870158/101‑1 (MQ=255)
                                                  cgcgGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGATTCAGa                                            >  2:4125320/1‑101 (MQ=255)
                                                   gcgGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGATTCAGAt                                           >  1:1458963/1‑101 (MQ=255)
                                                     ggCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGATTCAGATgg                                         >  2:2001699/1‑101 (MQ=255)
                                                       ccTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGATTCAGATgggg                                       >  2:3268641/1‑101 (MQ=255)
                                                       ccTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGATTCAGATgggg                                       >  2:4367790/1‑101 (MQ=255)
                                                        ctcactcaACAACCACCGCCTCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGATTCAGATGGGGc                                      <  1:2064226/101‑1 (MQ=255)
                                                         tcactcaACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGATTCAGATGGGGCa                                     >  2:861201/1‑101 (MQ=255)
                                                           actcaACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGATTCAGATGGGGCAAt                                   >  2:1695269/1‑101 (MQ=255)
                                                            ctcaACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGATTCAGATGGGGCAATa                                  <  2:415218/101‑1 (MQ=255)
                                                            ctcaACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGATTCAGATGGGGCAATa                                  <  1:3279436/101‑1 (MQ=255)
                                                            ctcaACAACCACCGCCGCCCTCATCAGGCCCTTCCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGATTCAGATCGGGCAATa                                  >  1:3546809/1‑101 (MQ=255)
                                                             tcaACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGATTCAGATGGGGCAATac                                 >  1:739939/1‑101 (MQ=255)
                                                             tcaACAACCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGATTCAGATGGGGCAATac                                 >  1:4553160/1‑101 (MQ=255)
                                                              caacaaCCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGATTCAGATGGGTCGATaca                                <  2:1069641/101‑1 (MQ=25)
                                                              caacaaCCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGATTCAGATGGGGCAATaca                                <  1:1325210/101‑1 (MQ=255)
                                                               aacaacCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGATTCAGATGGGGCAATaaac                               >  2:1098882/1‑101 (MQ=255)
                                                                caaacCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGATTCAGATGGGGCAATACACg                              <  2:3229552/99‑1 (MQ=255)
                                                                acaacCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGATTCAGATGGGGCAATACACg                              <  2:4456028/101‑1 (MQ=255)
                                                                  aacCACCGCCGCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGATTCAGATGGGGCAATACACGCt                            >  1:477965/1‑101 (MQ=255)
                                                                       ccgccgCCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGATTCAGATGGGGCAATACACGCTCGGCa                       <  2:4563754/101‑1 (MQ=255)
                                                                        cgccgcCCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGATTCAGATGGGGCAATACACGCTCGGCAt                      >  1:659181/1‑101 (MQ=255)
                                                                         gccgccCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGATTCAGATGGGGCAATACACGCTCGGCATg                     >  2:1180616/1‑101 (MQ=255)
                                                                         gccgccCTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGATTCAGATGGGGCAATACACGCTCGGCATg                     <  2:2081050/101‑1 (MQ=255)
                                                                               cTCATCAGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGATTCAGATGGGGCAATACACGCTCGGCATGTTGccc               >  1:3352787/1‑101 (MQ=255)
                                                                                tcatcaGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGATTCAGATGGGGCAATACACGCTCGGCATGTTGCCCg              <  1:443089/101‑1 (MQ=255)
                                                                                tcatcaGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGATTCAGATGGGGCAATACACGCTCGGCATGTTGCCCg              <  1:1098968/101‑1 (MQ=255)
                                                                                   tcaGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGATTCAGATGGGGCAATACACGCTCGGCATGTTGCCCGCCa           >  2:692885/1‑101 (MQ=255)
                                                                                   tcaGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGATTCAGATGGGGCAATACACGCTCGGCATGTTGCCCGCCa           <  2:916536/101‑1 (MQ=255)
                                                                                     aGGCCCTTGCCGTGC.GCACTCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGATTCAGATGGGGCAATACACGCTCGGCATGTTGCCCGCCACg         <  1:337168/101‑1 (MQ=255)
                                                                                     aGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGATTCAGATGGGGCAATACACGCTCGGCATGTTGCCCGCCACg         >  1:786355/1‑101 (MQ=255)
                                                                                     aGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGATTCAGATGGGGCAATACACGCTCGGCATGTTGCCCGCCACg         <  2:3848702/101‑1 (MQ=255)
                                                                                     aGGCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGATTCAGATGGGGCAATACACGCTCGGCATGTTGCCCGCCACg         >  1:2590645/1‑101 (MQ=255)
                                                                                      ggCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGATTCAGATGGGGCAATACACGCTCGGCATGTTGCCCGCCACgg        <  1:1146288/101‑1 (MQ=255)
                                                                                       gCCCTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGATTCAGATGGGGCAATACACGCTCGGCATGTTGCCCGCCACGGc       >  1:2686386/1‑101 (MQ=255)
                                                                                         ccTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGATTCAGATGGGGCAATACACGCTCGGCATGTTGCCCGCCACGGccc     <  1:2439779/101‑1 (MQ=255)
                                                                                         ccTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGATTCAGATGGGGCAATACACGCTCGGCATGTTGCCCGCCACGGccc     <  1:1824404/101‑1 (MQ=255)
                                                                                         ccTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGATTCAGATGGGGCAATACACGCTCGGCATGTTGCCCGCCACGGccc     >  1:4341281/1‑101 (MQ=255)
                                                                                          cTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGATTCAGATGGGGCAATACACGCTCGGCATGTTGCCCGCCACGGCCCg    >  2:1222963/1‑101 (MQ=255)
                                                                                          cTTGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGATTCAGATGGGGCAATACACGCTCGGCATGTTGCCCGCCACGGCCCg    <  2:2360543/101‑1 (MQ=255)
                                                                                           ttGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGATTCAGATGGGGCAATACACGCTCGGCATGTTGCCCGCCACGGCCCgg   >  2:3980350/1‑101 (MQ=255)
                                                                                           ttGCCGTGC.GCACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGATTCAGATGGGGCAATACACGCTCGGCATGTTGCCCGCCACGGCCCgg   >  2:2389795/1‑101 (MQ=255)
                                                                                                      |                                                                                           
GCGTCATCGGCGACTGGATCGTTCGGCCGCTCTCTCGGACCCATGGCGATCGCGGCCTCACTCAACAACCACCGCCGCCCTCATCAGGCCCTTGCCGGGC.G.ACGCCTGTCGAGGCATTCAGATTAGCGGCTTAACTTGAGCAGATTCAGATGGGGCAATACACGCTCGGCATGTTGCCCGCCACGGCCCGGT  >  NC_014034/2256334‑2256525

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 29 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG