| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,577,283 | +G | 100% | intergenic (+205/‑224) | fdx → / → purU | ferredoxin VI/formyltetrahydrofolate deformylase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,577,283 | 1 | .→G | 100.0% | 11.9 | 94 | intergenic (+205/‑224) | fdx/purU | ferredoxin VI/formyltetrahydrofolate deformylase |
| Reads supporting (aligned to +/- strand): new base (69/19): ref base (1/5): total (70/24) | ||||||||||
| Fisher's exact test strand distribution p-value = 3.82e-03 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.82e-02 | ||||||||||
Only 100 of 122 total aligned reads displayed.
CGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.C..GGGGCGGAG.CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAA > NC_014034/2577183‑2577378
|
cGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTc.c < 1:4294438/101‑1 (MQ=255)
cGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GAGGGTc.c < 1:419884/101‑1 (MQ=255)
ggCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.C..g < 1:1263682/101‑1 (MQ=255)
gCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.C..gg < 2:3808479/101‑1 (MQ=255)
gCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.C..gg < 1:3444063/101‑1 (MQ=255)
gCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.C..gg > 1:3421550/1‑101 (MQ=255)
gCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.C..gg > 1:2095599/1‑101 (MQ=255)
cGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.C..ggg < 1:1052184/101‑1 (MQ=255)
gTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.C..gggg > 2:2344577/1‑101 (MQ=255)
tATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.C..ggggg > 1:652759/1‑100 (MQ=255)
tATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.C..ggggg > 1:4515406/1‑100 (MQ=255)
aTTTGCACCAGGAACAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.C..gggggc < 1:4096182/101‑3 (MQ=255)
aTTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.C..gggggc < 2:595776/101‑3 (MQ=255)
aTTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.C..gggggc > 1:636432/1‑99 (MQ=255)
tttGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.C..gggggcg > 2:800/1‑98 (MQ=255)
ttGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.C..gggggcgg < 1:1137736/101‑5 (MQ=255)
tGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.C..gggggcgga < 2:3860717/101‑6 (MQ=255)
gCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.CG.GGGGCGGAg < 1:4485444/101‑1 (MQ=255)
gCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.CG.GGGGCGGAg < 2:215157/101‑1 (MQ=255)
aGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.CG.GGGGCGGAG.ccccc < 1:929108/101‑1 (MQ=255)
aGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.CG.GGGGCGGAG.ccccc < 2:2813127/101‑1 (MQ=255)
ggAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGCCCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCcg < 1:699074/101‑1 (MQ=255)
gAAAAGCCAAAGCCGTCCCCGGCAGGACCTAAGGCCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCcgg > 1:1573741/1‑101 (MQ=255)
aaagccaaagccGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCcggcg < 2:581089/101‑1 (MQ=255)
aaagccaaagccGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCcggcg < 1:3700132/101‑1 (MQ=255)
aagccaaagccGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCcggcgg > 1:3863971/1‑101 (MQ=255)
ccaaagccGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGTc < 1:3942079/101‑1 (MQ=255)
aaagccGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCggggtgc > 2:3529969/1‑97 (MQ=255)
aaagccGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGGCGc > 1:1743070/1‑101 (MQ=255)
aaagccGTCCCCGGCAGGACCGAAGGCCTCAGGA.CCCGGGCCCC.TTTTATCTTGCCCCAAATATCCCGGGGGGCC.C..GGGGCGGAG.CCCCCCGCGGGGCggc > 2:3420314/1‑99 (MQ=21)
aagccGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCggggggcc > 1:1820594/1‑96 (MQ=255)
aagccGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGTCGcc < 1:3054691/101‑1 (MQ=255)
agccGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGGCGGCg > 2:635937/1‑101 (MQ=25)
cGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGTCGCCgggg > 1:203018/1‑101 (MQ=255)
gTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGGCGCCGGGGc > 1:684558/1‑101 (MQ=255)
gccccGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGTCGCCGGGGCg < 2:2934604/100‑1 (MQ=255)
cccgGGCGGCACCCAAGGCCTGGGGACCCAGGGCCCC.TTTTCTCTTCCCAAAAATATCCC.GGGGGTCGG..GGGGCGGAG.CCCCCGGCGGGTCGCCGGGGCGa < 2:3474092/101‑1 (MQ=12)
cccGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGTCGCCGGGGCGaa < 2:3858220/101‑1 (MQ=255)
cccGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGGCGCCGGGGCGaa > 2:1905487/1‑101 (MQ=255)
cccGGCAGGACCGAAGCCCTCAGGCCCCCGGCCCCC.TTTTATCTTGCCCAAAATACCCG.GGGGGTC.CG.GGGGGGGAG.CCCCCGGCGGGTCGCCGGGGCGaa < 1:3826897/101‑1 (MQ=21)
cGGCAGGACC.AAAGCCCCAAGGCCCCGGGCCCCTTTTTTTCTTGCCAAAAAT.TCCC.GGGGGTC.CGGGGGGCGGCC.CCCCCGGCGGGTCGCCGGGGCGAAGc < 2:3472970/101‑1 (MQ=12)
gCAGGACCGAAGGCCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGTCGCCCGGGCGAAGCcg > 2:1685886/1‑101 (MQ=255)
aGGACCGAAGGCCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGTCGCCGGGGCGAAGCcgcg > 1:4263776/1‑101 (MQ=255)
aGGACCGAAGGCCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGGCGCCGGGGCGAAGCcgcg > 1:1918008/1‑101 (MQ=255)
ggACCGAAGGCCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGGCGCCGGGGCGAAGGCgcgg > 1:3279423/1‑101 (MQ=25)
ggACCGAAGCCCTCAGGCCCCCGGGCCCT.TTTTATCTTGCCCAAAATATCCC.GGGGGTCGG..GGGGGGGAC.CCCCCGGCGGGTCGCCGGGGCGAAGCCgcgg < 1:4240080/101‑1 (MQ=21)
gACCGAAGGCCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGGCGCCGGGGGGGAGACgcggc > 1:2778507/1‑101 (MQ=21)
cGAAGGCCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGGCGCCGGGGCGAAGCCGCGGCGaa > 1:373936/1‑101 (MQ=255)
gAAGGCCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGGGGCCGGGGGGGGGGCGCGGCGcaa > 2:1265281/1‑101 (MQ=18)
gAAGGCCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGGGGCCGGGGGGGAGGCGCGGCGcaa > 1:1994482/1‑101 (MQ=21)
aaGGCCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAAt > 1:2186027/1‑101 (MQ=255)
aaGGCCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAAt > 1:2703919/1‑101 (MQ=255)
tCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGGAATcccggc > 2:159581/1‑101 (MQ=255)
tCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATcccggc > 2:3731615/1‑101 (MQ=255)
cAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGGCGCCGGGGCGAAGCCGCGGCGAAATcccggcc > 1:535245/1‑101 (MQ=255)
aGGACCCCGGGCCCC.TTTTATCTTGCCTAAAATATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATcccggccc > 2:2759275/1‑101 (MQ=255)
aGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGCCGCCGGGGCGAACCCCCGGCGAAATcccggccc > 2:2833540/1‑101 (MQ=21)
ggACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATcccggcccc > 1:1647232/1‑101 (MQ=255)
gACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATcccggccccg > 1:4565062/1‑101 (MQ=255)
aCCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGTCGCCGGGGGGAAACGGCGGTGAAAAtccggccccgg > 1:2561616/1‑101 (MQ=18)
cccGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCa > 1:1797455/1‑101 (MQ=255)
cGGGCCCT.TTTTATCTTGCCCAAAATACCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAg < 1:1284176/101‑1 (MQ=21)
ggCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGGCGCCGGGGCGACGCCGCGGCGGAATCCCGGCCCCGGGAAccg > 1:973464/1‑101 (MQ=21)
ccc.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGccg > 1:2162120/1‑100 (MQ=255)
cctttttATCTTGCCAAAAATTCCCC.GGGGGTCGG..GGGGGGGAC.CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCt < 2:4580088/98‑1 (MQ=21)
ctttttATCTTGCCAAAAATACCCG.GGGGGCC.G..GGGGGGGGGCCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTg < 1:4150978/99‑1 (MQ=21)
ttttATCTTGCCCAAAATATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGACGCCGGGGCGAAACCGCGGCGAAATACCGGCCCCGGCACGCGCCGggg > 1:3470718/1‑101 (MQ=18)
tttATCTTGCCCAAAATATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCCGGAAGCGCCTGGGc > 2:1796422/1‑101 (MQ=21)
tttATCTTGCCCAAAATATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGGCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTgggg > 1:935796/1‑100 (MQ=255)
tttATCTTGCCCAAAATATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGCCGCCGGGGCGAAGCCGCGNCCNNATCCCGCCCCCGGCAAGCGCACGGGc > 1:3131852/1‑101 (MQ=18)
ttATCTTGCCCAAAATATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCg > 1:3430313/1‑101 (MQ=255)
tATCTTGCCCAAAATATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCgg > 2:3016347/1‑101 (MQ=255)
tATCTTGCCCAAAATATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGGCGCCGGGGCGAAGCCGCGGAGAAAACCCGGCCCCGGCAAGCGCCTGGGCgg > 1:1677172/1‑101 (MQ=21)
aTCTTGCCCAAAATATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCggg > 2:2481524/1‑101 (MQ=255)
tcgtGCCCAAAATATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGa < 1:1265372/98‑1 (MQ=255)
tCTTGCCCAAAATATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGGAATCCCGGCGCCGGCAAGCGCCCggggcggg > 1:4441345/1‑96 (MQ=18)
tCTTGCCCAAAATATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGa < 2:686423/101‑1 (MQ=255)
cTTGCCCAAAATCCCCG.GGGGGCCGG..GGGGCGGAG.CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGaa < 1:3242489/101‑1 (MQ=25)
cTTGCCCAAAATATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGGCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGaa > 1:815380/1‑101 (MQ=255)
ttGCCCAAAATATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAg < 2:2778342/101‑1 (MQ=255)
cccAAAATATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATc < 2:636368/101‑1 (MQ=255)
cccAAAATATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGGCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGGAGATc > 1:1698226/1‑101 (MQ=25)
ccAAAATTGCCC.GGGGCGC.CGGGGGGGGGGG.CCCCGGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATc < 2:1994365/101‑1 (MQ=25)
ccAAAATATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATcg > 2:4142350/1‑101 (MQ=255)
cAAAATATCCC.GGGGGTCGG..GGGGCGGAG.CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATcgc < 2:3620258/101‑1 (MQ=255)
aaaTATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATcgcgc > 2:2543117/1‑101 (MQ=255)
aaTATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATcgcgcg > 2:793736/1‑101 (MQ=255)
aaTATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATcgcgcg > 2:2308717/1‑101 (MQ=255)
aaTATCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGTCGCCCGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATcgcgcg > 2:1885607/1‑101 (MQ=255)
atatCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGCAGATcgcgccc > 2:704574/1‑99 (MQ=255)
atatCCC.GGGGGGC.CG.GGGGCGGAG.CCCCCGGCGGGTCGCCGGGGTGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCgcgcgc < 2:3033079/101‑1 (MQ=25)
tatCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGcc > 1:3690837/1‑101 (MQ=255)
tatCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGTCGCCGGGGCGAAGCCCCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGGAGATCGCGGGcc > 1:4701518/1‑101 (MQ=25)
tCCC.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGcccc > 1:311237/1‑101 (MQ=255)
ccc.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCg > 2:180041/1‑101 (MQ=255)
c.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGGCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGa > 1:2666616/1‑101 (MQ=255)
c.GGGGGTC.CG.GGGGCGGAG.CCCCCGGCGGGGCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGa > 2:1516001/1‑101 (MQ=255)
gggggTC.CG.GGGGCGGAG.CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAg > 1:973621/1‑101 (MQ=255)
gggTC.CG.GGGGCGGAG.CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGCGCa > 1:1897590/1‑101 (MQ=255)
ggTC.CG.GGGGCGGAG.CCCCCGGCGGGTCGCCGGGGCGAAGCCGGGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGGAGAGCGCGCGCCCCGGGGCaa > 1:657720/1‑101 (MQ=25)
|
CGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGTC.C..GGGGCGGAG.CCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAA > NC_014034/2577183‑2577378
Base quality scores:
ATCG
< 3 ≤
ATCG
< 12 ≤
ATCG
< 22 ≤
ATCG
< 32 ≤
ATCG
< 41 ≤
ATCG
|