BRESEQ :: Evidence

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	2,135,155	1	.→A	1.1%	2.0 ‑0.5 0.0	278	intergenic (‑149/+62)	RCAP_rcc01974/RCAP_rcc01975	hypothetical protein/hypothetical protein
Rejected: E-value exceeds prediction threshold.
Reads supporting (aligned to +/- strand): new base (1/2): ref base (142/133): total (143/135)
Fisher's exact test strand distribution p-value = 6.13e-01
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.00e+00

Only 100 of 313 total aligned reads displayed.


CTTATGGTCAAGCCATTAAATTGCGTTTATCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGA.GGGCCAAAGTTCAAAGG.C.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAATTCCGCCAATGTTGCTCGGACACGATGCA  >  NC_014034/2135056‑2135255


  tATGGTCAAGCCATTAAATTGCGTTTATCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGG.c.cc                                                                                                    >  2:3581371/1‑101 (MQ=255)


      gtaaaGCCATTAAATTGCGTTTATCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGG.c.cccgct                                                                                                <  1:3697277/98‑5 (MQ=255)


         aaGCCATTAAATTGCGTTTATCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTc                                                                                              >  1:725517/1‑101 (MQ=255)


         aaGCCATTAAATTGCGTTTATCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTc                                                                                              >  1:3589032/1‑101 (MQ=255)


           gCCATTAAATTGCGTTTATCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCa                                                                                            <  1:3181504/101‑1 (MQ=255)


             cATTAAATTGCGTTTATCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGc                                                                                          >  1:235936/1‑101 (MQ=255)


              aTTAAATTGCGTTTATCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCg                                                                                         >  2:4027035/1‑101 (MQ=255)


               ttAAATTGCGTTTATCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCgg                                                                                        <  1:4234689/101‑1 (MQ=255)


               ttAAATTGCGTTTATCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCgg                                                                                        >  1:2183658/1‑101 (MQ=255)


                tAAATTGCGTTTATCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCggg                                                                                       >  2:241650/1‑101 (MQ=255)


                 aaaTTGCGTTTATCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCgggg                                                                                      >  2:4311836/1‑101 (MQ=255)


                  aaTTGCGTTTATCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGc                                                                                     >  1:97826/1‑101 (MQ=255)


                  aaTTGCGTTTATCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGc                                                                                     >  2:575608/1‑101 (MQ=255)


                  aaTTGCGTTTATCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGc                                                                                     >  2:4185393/1‑101 (MQ=255)


                    ttGCGTTTATCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCa                                                                                   >  2:3128958/1‑101 (MQ=255)


                      gCGTTTATCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAg                                                                                 >  1:2865891/1‑101 (MQ=255)


                       cGTTTATCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAgg                                                                                >  1:2115170/1‑101 (MQ=255)


                       cGTTTATCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAgg                                                                                >  1:3241235/1‑101 (MQ=255)


                       cGTTTATCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAgg                                                                                >  2:3882676/1‑101 (MQ=255)


                       cGTTTATCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAgg                                                                                <  2:4204163/101‑1 (MQ=255)


                        gTTTATCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAggg                                                                               <  2:3515265/101‑1 (MQ=255)


                         tttATCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAgggg                                                                              <  1:2781637/101‑1 (MQ=255)


                           tATCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGcg                                                                            >  1:941641/1‑101 (MQ=255)


                           tATCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGcg                                                                            >  1:1279830/1‑101 (MQ=255)


                           tATCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGcg                                                                            >  1:250066/1‑101 (MQ=255)


                             tCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGcgac                                                                          <  1:2438611/101‑1 (MQ=255)


                                cAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCgacgac                                                                       <  1:11140/101‑1 (MQ=255)


                                cAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCgacgac                                                                       <  1:3856896/101‑1 (MQ=255)


                                cAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCgacgac                                                                       >  2:2204614/1‑101 (MQ=255)


                                 aaCTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGacgacg                                                                      >  2:2002881/1‑101 (MQ=255)


                                  aCTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACgg                                                                     >  2:1172821/1‑101 (MQ=255)


                                   cTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACggg                                                                    >  1:3433900/1‑100 (MQ=255)


                                   cTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGt                                                                    >  1:3928263/1‑101 (MQ=255)


                                    tttGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCGAGCGGGGCCAAGGGGCGACGACGGTg                                                                   >  2:2797732/1‑101 (MQ=255)


                                     ttGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGa                                                                  <  2:1681046/101‑1 (MQ=255)


                                     ttGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGa                                                                  >  1:187932/1‑101 (MQ=255)


                                      tGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGaa                                                                 <  2:3773571/101‑1 (MQ=255)


                                        cTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAgg                                                               <  1:225885/101‑1 (MQ=255)


                                         ttCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGc                                                              <  2:182615/101‑1 (MQ=255)


                                         ttCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGc                                                              >  1:4603788/1‑101 (MQ=255)


                                         ttCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGc                                                              <  2:4629863/101‑1 (MQ=255)


                                         ttCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGc                                                              >  2:448150/1‑101 (MQ=255)


                                            cgcgTCGATTCGTGGAAGCTTCGAGACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCaaa                                                           <  1:269743/101‑1 (MQ=255)


                                            cgcgTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCaaa                                                           <  1:3136241/101‑1 (MQ=255)


                                               gTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCa                                                        <  2:2697142/101‑1 (MQ=255)


                                               gTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCa                                                        >  1:1433103/1‑101 (MQ=255)


                                               gTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCa                                                        <  1:119927/101‑1 (MQ=255)


                                                  gATTCGTGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACt                                                     <  2:818112/101‑1 (MQ=255)


                                                  gATTCGTGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACt                                                     >  2:297792/1‑101 (MQ=255)


                                                  gATTCGTGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACt                                                     <  2:3408104/101‑1 (MQ=255)


                                                   aTTCGTGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTg                                                    >  1:4135368/1‑101 (MQ=255)


                                                     tCGTGGAAGCTTCGACACGAGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTc                                                  <  1:1624241/101‑1 (MQ=255)


                                                       gTGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGc                                                >  2:3168972/1‑101 (MQ=255)


                                                       gTGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGc                                                >  1:492579/1‑101 (MQ=255)


                                                       gTGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGc                                                >  2:4405247/1‑101 (MQ=255)


                                                       gTGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGc                                                <  2:2589821/101‑1 (MQ=255)


                                                        tGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCt                                               >  2:1013039/1‑101 (MQ=255)


                                                        tGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCt                                               <  2:3928021/101‑1 (MQ=255)


                                                        tGGAAGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCt                                               >  2:3040870/1‑101 (MQ=255)


                                                           aaGCTTCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACt                                            >  2:1761006/1‑101 (MQ=255)


                                                               ttCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATc                                        <  1:1761748/101‑1 (MQ=255)


                                                               ttCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATc                                        <  2:1466533/101‑1 (MQ=255)


                                                                tCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCt                                       <  1:2668798/101‑1 (MQ=255)


                                                                tCGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCt                                       <  1:1487730/101‑1 (MQ=255)


                                                                 cGACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTa                                      <  1:568772/101‑1 (MQ=255)


                                                                  gACACGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAg                                     <  1:861792/101‑1 (MQ=255)


                                                                  aacacGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAg                                     >  1:3577561/2‑101 (MQ=255)


                                                                   acacGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGa                                    <  2:1090451/101‑1 (MQ=255)


                                                                    cacGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGat                                   <  1:1970047/101‑1 (MQ=255)


                                                                    cacGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGat                                   >  2:1341234/1‑101 (MQ=255)


                                                                    cacGCGGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGat                                   <  2:2133012/101‑1 (MQ=255)


                                                                      cgcgGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGatat                                 <  1:3399461/101‑1 (MQ=255)


                                                                      cgcgGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGatat                                 >  2:2350700/1‑101 (MQ=255)


                                                                       gcgGGCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGAtata                                <  1:4646413/101‑1 (MQ=255)


                                                                         gggCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAAt                              <  2:672848/101‑1 (MQ=255)


                                                                         gggCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAAt                              <  2:3241034/101‑1 (MQ=255)


                                                                         gggCTTTGAGGGGCCAAAGTTCAAAGG.CACCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAAt                              <  2:1781943/101‑1 (MQ=255)


                                                                          ggCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAAtt                             <  1:1155936/101‑1 (MQ=255)


                                                                          ggCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAAtt                             <  1:1687430/101‑1 (MQ=255)


                                                                           gCTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAATTc                            <  2:3314866/101‑1 (MQ=255)


                                                                            cTTTGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAATTcc                           <  1:4556211/101‑1 (MQ=255)


                                                                             tttGAGGGGCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAATTCCg                          <  1:64877/101‑1 (MQ=255)


                                                                              ttgaggggCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAATTCCGc                         <  1:4299567/96‑1 (MQ=255)


                                                                                    ggCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAATTCCGCCAATGt                   >  2:2770399/1‑101 (MQ=255)


                                                                                    ggCCAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAATTCCGCCAATGt                   >  2:4705450/1‑101 (MQ=255)


                                                                                    gcccAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAATTCCGCCAATGt                   <  2:3861597/99‑1 (MQ=255)


                                                                                      ccAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAATTCCGCCAATGTTg                 <  1:1042716/101‑1 (MQ=255)


                                                                                      ccAAAGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAATTCCGCCAATGTTg                 >  2:2274654/1‑101 (MQ=255)


                                                                                        aaaGTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAATTCCGCCAATGTTGCt               >  2:2305829/1‑101 (MQ=255)


                                                                                           gTTCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAATTCCGCCAATGTTGCTCgg            >  1:1514322/1‑101 (MQ=255)


                                                                                            ttCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAATTCCGCCAATGTTGCTCGGa           <  1:448194/101‑1 (MQ=255)


                                                                                             tCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAATTCCGCCAATGTTGCTCGGac          <  2:3433693/101‑1 (MQ=255)


                                                                                             tCAAAGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAATTCCGCCAATGTTGCTCGGac          <  2:4544834/101‑1 (MQ=255)


                                                                                               aaaGGCC.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAATTCCGCCAATGTTGCTCGGacac        >  1:3948984/1‑101 (MQ=255)


                                                                                                 aggcc.ccGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGACAAAGCAACTGTCGCTACTGATCAAGATATAATTCCGCCAATGTTGCTCGGACACGa      >  1:4055940/5‑101 (MQ=255)


                                                                                                  ggcc.ccGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAATTCCGCCAATGTTGCTCGGACACGAt     >  1:3000306/4‑101 (MQ=255)


                                                                                                  ggcc.ccGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAATTCCGCCAATGTTGCTCGGACACGAt     <  1:4718582/98‑1 (MQ=255)


                                                                                                     c.ccGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAATTCCGCCAATGTTGCTCGGACACGATGCa  <  2:3535102/101‑1 (MQ=255)


                                                                                                     c.ccGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAATTCCGCCAATGTTGCTCGGACACGATGCa  <  2:1553670/101‑1 (MQ=255)


                                                                                                     c.ccGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAATTCCGCCAATGTTGCTCGGACACGATGCa  >  2:1237526/1‑101 (MQ=255)


CTTATGGTCAAGCCATTAAATTGCGTTTATCGCAACTTTGCTTCCGCGTCGATTCGTGGAAGCTTCGACACGCGGGCTTTGA.GGGCCAAAGTTCAAAGG.C.CCGCTTTCCAGCGGGGCCAAGGGGCGACGACGGTGAAGGCAAAGCAACTGTCGCTACTGATCTAGATATAATTCCGCCAATGTTGCTCGGACACGATGCA  >  NC_014034/2135056‑2135255

Base quality scores:


ATCG

< 3 ≤


ATCG

< 25 ≤


ATCG

< 31 ≤


ATCG

< 35 ≤


ATCG

< 41 ≤


ATCG