Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0140343,122,2770C→A 4.4% 7.2 ‑17.3 ‑0.0305intergenic (‑57/+73)RCAP_rcc02929/RCAP_rcc02930hypothetical protein/hypothetical protein
Rejected: Prediction has biased read strand distribution supporting polymorphism.
Reads supporting (aligned to +/- strand):  new base (0/16):  ref base (196/92):  total (196/109)
Fisher's exact test strand distribution p-value = 2.99e-08
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.64e-01

Only 100 of 383 total aligned reads displayed.

CGGTTTAGAAAATCAAGAAATACCGGCTTCGAAATAATTGTCACGCAAGCCTCGCGAGAAGCCAAGATCTATATTTTTCCGTATCATCATCAAAATTTCGCAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTATCTCCAGCCGCCTCTTCGAATTTGGCCTAAAATCAAGAATATTTACTAATATCAAGCAGAC  >  NC_014034/3122177‑3122378
                                                                                                    |                                                                                                     
  gTTTAGAAAATCAAGAAATACCGGCTTCGAAATAATTGTCACGCAAGCCTCGCGAGAAGCCAAGATCTATATTTTTCCGTATCATCATCAAAATTTCGCaa                                                                                                     >  1:4359368/1‑101 (MQ=255)
  gTTTAGAAAATCAAGAAATACCGGCTTCGAAATAATTGTCACGCAAGCCTCGCGAGAAGCCAAGATCTATATTTTTCCGTATCATCATCAAAATTTCGCaa                                                                                                     <  2:1449312/101‑1 (MQ=255)
   tttAGAAAATCAAGAAATACCGGCTTCGAAATAATTGTCACGCAAGCCTCGCGAGAAGCCAAGATCTATATTTTTCCGTATCATCATCAAAATTTCGCAAg                                                                                                    >  1:4112158/1‑101 (MQ=255)
   tttAGAAAATCAAGAAATACCGGCTTCGAAATAATTGTAACGCAAGCCTCGCGAGAAGCCAAGATCTATATTTTTCCGTATCATCATCAAAATTTCGCTAg                                                                                                    <  1:2707646/101‑1 (MQ=255)
    ttAGAAAATCAAGAAATACCGGCTTCGAAATAATTGTCACGCAAGCCTCGCGAGAAGCCAAGATCTATATTTTTCCGTATCATCATCAAAATTTCGCAAGc                                                                                                   >  2:3352332/1‑101 (MQ=255)
     tAGAAAATCAAGAAATACCGGCTTCGAAATAATTGTCACGCAAGCCTCGCGAGAAGCCAAGATCTATATTTTTCCGTATCATCATCAAAATTTCGCAAGcc                                                                                                  >  1:681581/1‑101 (MQ=255)
     tAGAAAATCAAGAAATACCGGCTTCGAAATAATTGTCACGCAAGCCTCGCGAGAAGCCAAGATCTATATTTTTCCGTATCATCATCAAAATTTCGCAAGcc                                                                                                  <  2:2924812/101‑1 (MQ=255)
     tAGAAAATCAAGAAATACCGGCTTCGAAATAATTGTCACGCAAGCCTCGCGAGAAGCCAAGATCTATATTTTTCCGTATCATCATCAAAATTTCGCAAGcc                                                                                                  <  2:3072999/101‑1 (MQ=255)
         aaaTCAAGAAATCCCGGCTTCGAAATAATTGTCCCGCAAGCCTCGCGAGAAGCCAAGATCTATATTTTTCCGTATCATCATCAAAATTTCGCAAGCCATca                                                                                              <  1:4028769/101‑1 (MQ=255)
          aaTCAAGAAATACCGGCTTCGAAATAATTGTCACGCAAGCCTCGCGAGAAGCCAAGATCTATATTTTTCCGTATCATCATCAAAATTTCGCAAGCCATcaa                                                                                             >  2:3569781/1‑101 (MQ=255)
           aTCAAGAAATACCGGCTTCGAAATAATTGTCACGCAAGCCTCGCGAGAAGCCAAGATCTATATTTTTCCGTATCATCATCAAAATTTCGCAAGCCATcaaa                                                                                            >  1:1722362/1‑101 (MQ=255)
             cAAGAAATACCGGCTTCGAAATAATTGTCACGCAAGCCTCGCGAGAAGCCAAGATCTATATTTTTCCGTATCATCATCAAAATTTCGCAAGCCATcaaaac                                                                                          >  2:2604320/1‑101 (MQ=255)
              aaGAAATCCCGGCTTCGAAATAATTGTCACGCAAGCCTCGCGAGAAGCCAAGATCTATATTTTTCCGTATCATCATCAAAATTTCGCAAGCCATcaaaaca                                                                                         <  2:1008290/101‑1 (MQ=255)
              aaGAAATCCCGGCTTCGAAATAATTGTCACGCAAGCCTCGCGAGAAGCCAAGATCTATATTTTTCCGTATCATCATCAAAATTTCGCAAGCCATcaaaaca                                                                                         <  2:244410/101‑1 (MQ=255)
              aaGAAATACCGGCTTCGAAATAATTGTCACGCAAGCCTCGCGAGAAGCCAAGATCTATATTTTTCCGTATCATCATCAAAATTTCGCAAGCCATcaaaaca                                                                                         >  1:3890321/1‑101 (MQ=255)
              aaGAAATACCGGCTTCGAAATAATTGTCACGCAAGCCTCGCGAGAAGCCAAGATCTATATTTTTCCGTATCATCATCAAAATTTCGCAAGCCATcaaaaca                                                                                         >  1:1003346/1‑101 (MQ=255)
               aGAAATACCGGCTTCGAAATAATTGTCACGCAAGCCTCGCGAGAAGCCAAGATCTATATTTTTCCGTATCATCATCAAAATTTCGCAAGCCATcaaaacaa                                                                                        >  1:4051805/1‑101 (MQ=255)
               aGAAATACCGGCTTCGAAATAATTGTCACGCAAGCCTCGCGAGAAGCCAAGATCTATATTTTTCCGTATCATCATCAAAATTTCGCAAGCCATcaaaacaa                                                                                        >  2:4631630/1‑101 (MQ=255)
                gAAATACCGGCTTCGAAATAATTGTCACGCAAGCCTCGCGAGAAGCCAAGATCTATATTTTTCCGTATCATCATCAAAATTTCGCAAGCCATcaaaacaaa                                                                                       >  1:2020600/1‑101 (MQ=255)
                gAAATACCGGCTTCGAAATAATTGTCACGCAAGCCTCGCGAGAAGCCAAGATCTATATTTTTCCGTATCATCATCAAAATTTCGCAAGCCATcaaaacaaa                                                                                       >  1:1912231/1‑101 (MQ=255)
                gAAATACCGGCTTCGAAATAATTGTCACGCAAGCCTCGCGAGAAGCCAAGATCTATATTTTTCCGTATCATCATCAAAATTTCGCAAGCCATcaaaacaaa                                                                                       <  2:235063/101‑1 (MQ=255)
                gAAATACCGGCTTCGAAATAATTGGCACGCAAGGCTCGCGAGAAGCCAAGATCTATATTTTTCCGTATCATCATCAAAATTTCGCAAGCCATcaaaacaaa                                                                                       >  2:2079337/1‑101 (MQ=255)
                 aaaTACCGGCTTCGAAATAATTGTCACGCAAGCCTCGCGAGAAGCCAAGATCTATATTTTTCCGTATCATCATCAAAATTTCGCAAGCCATcaaaacaaaa                                                                                      >  2:4493874/1‑101 (MQ=255)
                    tACGGGCTTCGAAATAATTGTCACGCAAGCCTCGCGAGAAGCCAAGATCTATATTTTTCCGTATCATCATCAAAATTTCGCAAGCCATCAAAACAAAATTc                                                                                   <  1:5667/101‑1 (MQ=255)
                    tACCGGCTTCGAAATAATTGTCACGCAAGCCTCGCGAGAAGCCAAGATCTATATTTTTCCGTATCATCATCAAAATTTCGCAAGCCATCAAAACAAAATTc                                                                                   >  1:4701447/1‑101 (MQ=255)
                      ccGGCTTCGAAATAATTGTCACGAAAGCCTCGCGAGAAGCCAAGATCTATATTTTTCCGTATCATCATCAAAATTTCGCAAGCCATCAAAACAAAATTCCg                                                                                 <  2:2154685/101‑1 (MQ=255)
                      ccGGCTTCAAAATAATTTTCACGCAAGCCTCGCGAGAAGCCAAGATCTATATTTTTCCGTATCATCATCAAAATTTCGCAAGCCATCAAAACAAAATTCCg                                                                                 <  1:4397513/101‑1 (MQ=255)
                         gCTTCGAAATAATTGTCACGCAAGCCTCGCGAGAAGCCAAGATCTATATTTTTCCGTATCATCATCAAAATTTCGCAAGCCATCAAAACAAAATTCCGAcc                                                                              >  2:3179757/1‑101 (MQ=255)
                             caaaaTAATTGCCACGAAAGCCTCGCGAGAAGCCAAGATCTATATTTTTCCGTATCATCATCAAAATTTCGCAAGCCATCAAAACAAAATTCCGACCACTc                                                                          <  1:4312863/99‑1 (MQ=255)
                             cGAAATAATTGTCACGCAAGCCTCGCGAGAAGCCAAGATCTATATTTTTCCGTATCATCATCAAAATTTCGCAAGCCATCAAAACAAAATTCCGACCACTc                                                                          >  2:4334838/1‑101 (MQ=255)
                              aaaaTAATTGTCACGCAAGCCTCGCGAGAAGCCAAGATCTATATTTTTCCGTATCATCATCAAAATTTCGCAAGCCATCAAAACAAAATTCCGACCACTcc                                                                         <  1:1678782/100‑1 (MQ=255)
                                aataatTGTCACGCAAGCCTCGCGAGAAGCCAAGATCTATATTTTTCCGTATCATCATCAAAATTTCGCAAGCCATCAAAACAAAATTCCGACCACTCCgg                                                                       >  1:2931780/1‑101 (MQ=255)
                                aataatTGTCACGCAAGCCTCGCGAGAAGCCAAGATCTATATTTTTCCGTATCATCATCAAAATTTCGCAAGCCATCAAAACAAAATTCCGACCACTCCgg                                                                       >  2:3388841/1‑101 (MQ=255)
                                 ataatTGTCACGCAAGCCTCGCGAGAAGCCAAGATCTATATTTTTCCGTATCATCATCAAAATTTCGCAAGCCATCAAAACAAAATTCCGACCACTCCggg                                                                      >  1:3741718/1‑101 (MQ=255)
                                   aatTGTCACGCAAGCCTCGCGAGAAGCCAAGATCTATATTTTTCCGTATCATCATGAAAATTTCGCAAGCCATCAAAACAAAATTCCGACCACTCCGGGcc                                                                    >  2:780544/1‑101 (MQ=255)
                                   aatTGTCACGAAAGCCTCGCGAGAAGCCAAGATCTATATTTTTCCGTATCATCATCAAAATTTCGCAAGCCATCAAAACAAAATTCCGACCACTCCGGGcc                                                                    <  2:408065/101‑1 (MQ=255)
                                    atTGTCACGCAAGCCTCGCGAGAAGCCAAGATCTATATTTTTCCGTATCATCATCAAAATTTCGCAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCa                                                                   >  2:4722690/1‑101 (MQ=255)
                                    atTGTCACGCAAGCCTCGCGAGAAGCCAAGATCTATATTTTTCCGTATCATCATCAAAATTTCGCAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCa                                                                   >  2:954925/1‑101 (MQ=255)
                                       gTCACGCAAGCCTCGCGAGAAGCCAAGATCTATATTTTTCCGTATCATCATCAAAATTTCGCAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCAttt                                                                <  1:308481/101‑1 (MQ=255)
                                         cACGCAAGCCTCGCGAGAAGCCAAGATCTATATTTTTCCGTATCATCATCAAAATTTCGCAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTAt                                                              <  2:1743463/101‑1 (MQ=255)
                                          cccaaaGCCTCGGGAGAAGCCAAGATCTATATTTTTCCGTATCATCATAAAAATTTCGCAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTAtc                                                             <  1:1599201/97‑1 (MQ=255)
                                          aCGCAAGCCTCGCGAGAAGCCAAGATCTATATTTTTCCGTATCATCATCAAAATTTCGCAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTAtc                                                             >  1:3434711/1‑101 (MQ=255)
                                            gCAAGCCTCGCGAGAAGCCAAGATCTATATTTTTCCGTATCATCATCAAAATTTCGCAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTAtctc                                                           >  2:3484041/1‑101 (MQ=255)
                                             cAAGCCTCGCGAGAAGCCAAGATCTATATTTTTCCGTATCATCATCAAAATTTCGCAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTATCTcc                                                          >  1:1810710/1‑101 (MQ=255)
                                              aaGCCTCGCGAGAAGCCAAGATCTATATTTTTCCGTATCATCATCAAAATTTCGCAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTATCTCCa                                                         <  2:274480/101‑1 (MQ=255)
                                                  cccgcgAGAAGCCAAGATCTATATTTTTCCTTATCATCATAAAAATTTCGCAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTATCTCCAgccg                                                     <  1:3235040/99‑1 (MQ=255)
                                                  cTCGCGAGAAGCCAAGATCTATATTTTTCCGTATCATCATCAAAATTTCGCAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTATCTCCAgccg                                                     >  1:1313110/1‑101 (MQ=255)
                                                     gcgAGAAGCCAAGATCTATATTTTTCCGTATCATCATCAAAATTTCGCAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTATCTCCAGCCGCct                                                  >  2:569116/1‑101 (MQ=255)
                                                      cgAGAAGCCAAGATCTATATTTTTCCGTATCATCATCAAAATTTCGCAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCAATTATCTCCAGCCGCctc                                                 >  2:4267241/1‑101 (MQ=255)
                                                        agaAGCCAAGATCTATATTTTTCCGTATCATCATCAAAATTTCGCAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTATCTCCAGCCGCCTCtt                                               <  2:116219/101‑1 (MQ=255)
                                                         gaAGCCAAGATCTATTTTTTTCCGTATCATCATCAAAATTTCGCAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTATCTCCAGCCGCCTCTTc                                              <  1:1430432/101‑1 (MQ=255)
                                                         aaaGCCAAGATCTATTTTTTTCCGTATCATCATCAAATTTTCGCAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTATCTCCAGCCGCCTCTTc                                              <  1:1224133/100‑1 (MQ=255)
                                                          aaGCCAAGATCTATATTTTTCCGTATCATCATCAAAATTTCGCAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTATCTCCAGCCGCCTCTTCg                                             >  2:3448646/1‑101 (MQ=255)
                                                          aaGCCAAGATCTATATTTTTCCGTATCATCATCAAAATTTCGCAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTATCTCCAGCCGCCTCTTCg                                             <  1:647849/101‑1 (MQ=255)
                                                          aaGCCAAGATCTATATTTTCCCGTATCATCATCAAAATTTCGCAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTATCTCCAGCCGCCTCTTCg                                             <  2:2225359/101‑1 (MQ=255)
                                                            gcaaaGATCTATATTTTTCCTTATCATCATCAAAATTTCGAAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTATCTCCAGCCGCCTCTTCGaa                                           <  2:3109756/98‑1 (MQ=255)
                                                             ccAAGATCTATATTTTTCCGTATCATCATCAAAATTTCGCAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTATCTCCAGCCGCCTCTTCGAAt                                          >  1:2827768/1‑101 (MQ=255)
                                                               aaGATCTATATTTTTCCGTATCATCATCAAAATTTCGCAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTATCTCCAGCCGCCTCTTCGAAttt                                        >  1:960149/1‑101 (MQ=255)
                                                               aaGATCTATATTTTCCCTTATCATCATCAAAATTCCGAAAGCCATCAAAACAAAATTCCGACCCCTCCGGGCCATTTATCTCCAGCCGCCTCTTCGAAttt                                        <  2:74627/101‑1 (MQ=255)
                                                                  ttttattTTTTTCCGTATCATCATAAAAATTTCGAAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTATCTCCAGCCGCCTCTTCGAATTTGGc                                     <  1:2604472/98‑1 (MQ=255)
                                                                  aTCTATATTTTTCCGTATCATCATCAAAATTTCGCAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTATCTCCAGCCGCCTCTTCGAATTTGGc                                     >  2:3802705/1‑101 (MQ=255)
                                                                   tCTATTTTTTTCCGTATCATCATAAAAATTTCGAAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTATCTCCAGCCGCCTCTTCGAATTTGGcc                                    <  2:4359121/101‑1 (MQ=255)
                                                                    ttattTTTTTCCTTATCATCATCAAAATTTCGAAAGCCATCAAAACAAAATTCCGACCCCTCCGGGCCATTTATCTCCAGCCGCCTCTTCGAATTTGGCCt                                   <  1:3552567/100‑1 (MQ=255)
                                                                    cTATATTTTTCCGTATCATCATCAAAATTTCGCAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTATCTCCAGCCGNCTCTTCGAATTTGGCCt                                   >  2:842968/1‑101 (MQ=255)
                                                                      atatTTTTCCGTATCATCATCAAAATTTCGCAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTATCTCCAGCCGCCTCTTCGAATTTGGCCTaa                                 >  1:766115/1‑101 (MQ=255)
                                                                       tatTTTTCCGTATCATCATCAAAATTTCGCAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTATCTCCAGCCGCCTCTTCGAATTTGGCCTaaa                                >  2:1631505/1‑101 (MQ=255)
                                                                        ttttttCCGTATCATCATCAAAATTTCGCAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTATCTCCAGCCGCCTCTTCGAATTTGGCCTaaaa                               <  1:4248438/100‑1 (MQ=255)
                                                                        atTTTTCCGTATCATCATCAAAATTTCGCAAGCGATCAAAACAAAATTCCGACCACTCCGGGCCATTTATCTCCAGCCGCCTCTTCGAATTTGGCCTaaaa                               >  1:3019613/1‑101 (MQ=255)
                                                                          ttttCCGTATCATCATCAAAATTTCGCAAGCCATCAAAACAAAATTCCGACCCCTCCGGGCCATTTATCTCCAGCCGCCTCTTCGAATTTGGCCTAAAATc                             >  1:3954721/1‑101 (MQ=255)
                                                                          ttttCCGTATCATCATCAAAATTTCGCAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTATCTCCAGCCGCCTCTTCGAATTTGGCCTAAAATc                             >  1:2340902/1‑101 (MQ=255)
                                                                          tttcCCCTATCATCATAAAAATTTCGAAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTATCTCCAGCCGCCTCTTCGAATTTGGCCTAAAATc                             <  1:332479/101‑1 (MQ=255)
                                                                           tttCCGTATCATCATCAAAATTTCGCAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTATCTCCAGCCGCCTCTTCGAATTTGGCCTAAAATCa                            >  2:619987/1‑101 (MQ=255)
                                                                            ttCCTTATCATCATAAAAATTTCGCAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTATCTCCAGCCGCCTCTTCGAATTTGGCCTAAAATCaa                           <  1:45309/101‑1 (MQ=255)
                                                                            ttCCGTATCATCATCAAAATTTCGCAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTATCTCCAGCCGCCTCTTCGAATTTGGCCTAAAATCaa                           >  2:519583/1‑101 (MQ=255)
                                                                             tCCGTATCATCAAAAAAATTTCGAAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTATCTCCAGCCGCCTCTTCGAATTTGGCCTAAAATCaaa                          <  2:3019506/101‑2 (MQ=255)
                                                                             tCCGTAACATAATAAAAATTTCGAAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTATCTCCAGCCGCCTCTTCGAATTTGGCCTAAAATCaaa                          <  1:2184120/101‑2 (MQ=255)
                                                                               ctacacatcatcaAATTTCCCCAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTATCTCCAGCCGCCTCTTCGAATTTGGCCTAAAATCaaaat                        <  2:3876094/96‑4 (MQ=255)
                                                                               cGTATCATCATCAAAATTTCGCAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTATCTCCAGCCGCCTCTTCGAATTTGGCCTAAAATCaaaat                        >  1:1108836/1‑98 (MQ=255)
                                                                               cGTATAATCAAAAAAATCCCGAAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTATCTCCAGCCGCCTCTTCGAATTTGGCCTAAAATCaaaat                        <  1:363836/101‑4 (MQ=255)
                                                                                gTATCATCATCAAAATTTCGCAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTATCTCCAGCCGCCTCTTCGAATTTGGCCTAAAATCaaaata                       >  1:3873777/1‑97 (MQ=255)
                                                                                 tATCATCATAAAAATTTCGAAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTATCTCCAGCCGCCTCTTCGAATTTGGCCTAAAATCAA.Aatat                     <  2:4130953/101‑1 (MQ=255)
                                                                                  atcatcatcAAATTTTCGAAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTATCTCCAGCCGCCTCTTCGAATTTGGCCTAAAATCAA.AATAtt                    <  2:1313018/101‑1 (MQ=255)
                                                                                  atcatcatcAAAATTTCGCAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTATCTCCAGCCGCCTCTTCGAATTTGGCCTAAAATCAA.AATAtt                    >  2:2476900/1‑101 (MQ=255)
                                                                                   tcatcataaAATTTTCCAAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTATCTCCAGCCGCCTCTTCGAATTTGGCCTAAAATCAA.AATAttt                   <  1:4744917/101‑1 (MQ=255)
                                                                                    catcatcaAAATTTCGCAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTATCTCCAGCCGCCTCTTCGAATTTGGCCTAAAATCAA.AATATTTa                  >  1:1789898/1‑101 (MQ=255)
                                                                                     atcatcaAAATTTCGCAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTATCTCCAGCCGCCTCTTCGAATTTGGCCTAAAATCAA.AATATTTAc                 >  2:2810745/1‑101 (MQ=255)
                                                                                     atcataaAAATTTCGAAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTATCTCCAGCCGCCTCTTCGAATTTGGCCTAAAATCAA.AATATTTAc                 <  1:3130222/101‑1 (MQ=255)
                                                                                      tcatcaAAATTTCGCAAGCCATCAAAACAAAATTCCGACCACTCCGTGCCATTTATCTCCAGCCGCCTCTTCGAATTTGGCCTAAAATCAA.AATATTTACt                >  2:1534810/1‑101 (MQ=255)
                                                                                       catcaAAGTTTCAAAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTATCTCCAGCCGCCTCTTCGAATTTGGCCTAAAATCAA.AATATTTACTa               <  2:1813873/101‑1 (MQ=255)
                                                                                       catcaAAATTTCGCAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTATCTCCAGCCGCCTCTTCGAATTTGGCCTAAAATCAA.AATATTTACTa               >  2:2648050/1‑101 (MQ=255)
                                                                                        atcaAAATTTCGCAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTATCTCCAGCCGCCTCTTCGAATTTGGCCTAAAATCAA.AATATTTACTaa              >  2:4028082/1‑101 (MQ=255)
                                                                                        ataaaaaTTTCGAAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTATCTCCAGCCGCCTCTTCGAATTTGGCCTAAAATCAA.AATATTTACTaa              <  2:3720425/98‑1 (MQ=255)
                                                                                           taaaTTTCGAAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTATCTCCAGCCGCCTCTTCGAATTTGGCCTAAAATCAA.AATATTTACTAatat           <  1:3801321/100‑1 (MQ=255)
                                                                                           aaaaTTTCGCAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTATCTCCAGCCGCCTCTTCGAATTTGGCCTAAAATCAA.AATATTTACTAatat           >  1:2395618/1‑101 (MQ=255)
                                                                                             aaTTTCGCAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTATCTCCAGCCGCCTCTTCGAATTTGGCCTAAAATCAA.AATATTTACTAATATCa         <  2:2680050/101‑1 (MQ=255)
                                                                                              aTTTCGCAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTATCTCCAGCCGCCTCTTCGAATTTGGCCTAAAATCAA.AATATTTACTAATATCaa        >  1:2537394/1‑101 (MQ=255)
                                                                                              aTTTCAAAAGCCATCAAAACAAAATTCCGACCCCTCCGGGCCATTTATCTCCAGCCGCCTCTTCGAATTTGGCCTAAAATCAA.AATATTTACTAATATCaa        <  2:4401821/101‑1 (MQ=255)
                                                                                               tttCGCAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTATCTCCAGCCGCCTCTTCGAATTTGGCCTAAAATCAA.AATATTTACTAATATCAAg       >  1:1267943/1‑101 (MQ=255)
                                                                                               tttCGAAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTATCTCCAGCCGCCTCTTCGAATTTGGCCTAAAATCAA.AATATTTACTAATATCAAg       <  1:1476465/101‑1 (MQ=255)
                                                                                                    cAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTATCTCCAGCCGCCTCTTCGAATTTGGCCTAAAATCAA.AATATTTACTAATATCAAGCAGAc  >  1:2653487/1‑101 (MQ=255)
                                                                                                    |                                                                                                     
CGGTTTAGAAAATCAAGAAATACCGGCTTCGAAATAATTGTCACGCAAGCCTCGCGAGAAGCCAAGATCTATATTTTTCCGTATCATCATCAAAATTTCGCAAGCCATCAAAACAAAATTCCGACCACTCCGGGCCATTTATCTCCAGCCGCCTCTTCGAATTTGGCCTAAAATCAAGAATATTTACTAATATCAAGCAGAC  >  NC_014034/3122177‑3122378

Base quality scores:  ATCG  < 3 ≤  ATCG  < 19 ≤  ATCG  < 30 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG