Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	974,198	3	.→G	100.0%	3.4	6	intergenic (+78/+181)	RCAP_rcc00884/RCAP_rcc00885	hypothetical protein/hypothetical protein
Rejected: E-value exceeds prediction threshold.
Reads supporting (aligned to +/- strand):  new base (0/6):  ref base (0/0):  total (0/6)

GATGTTGCCGCGCAACTCTGAACGCCGCCGGATGGCATTCAAAAGGCGCCCCCC.GGGGCGCCTTTTGTTTTCGCCACGCTGTCGCGTGGCGACCCGCCG.......TCGCCCCCCGGACCCCCCAGCGTATTTGCACCAAGAAAAAGCA  >  NC_014034/974100‑974241                                                                                                       |                                                gATGTTGCCGCGCAACTCTGAACGCCGCCGGATGGCATTCAAAAGGCGCCCCCC.GGGGCGCCTTTTGTTTTCGCCACGCTGTCGCGTGGCGACccgccggg                                                  >  1:2987697/1‑99 (MQ=255)       gCCCCGCAACTCGGACGCCCGCCGGATGGAATTAAAAGGGCCCCCCCC.GGGGCGCTTTTTTTTTCCCCCACGCTGTCGCGTGGCGCCccgccggggggctt                                            <  2:732039/101‑9 (MQ=255)                                   gccatacaaaGGCCCCCCCCGGGGGCCTTTTTTTTTTTCGCCCCGCTGTCGCGGGGCGCCCCGCCGGGGGGCTTCGCCCCCCGGACCCCCCAGCGTATTTg                 <  2:2250540/94‑1 (MQ=0)                                     atacAAACGGCCCCCCCG.GGGGCTCTTTTTTTTTTCCCCCCGTTGTCGGGTGGCGCCCCGCCGGGGGGCTTCGCCCCCCGGACCCCCCAGCGTATTTGCAc              <  2:471795/98‑1 (MQ=2)                                        caaacgccccccccg.GGGGCTTTTTTTTTTTCCCCCCCGCTGTCGCGTGGCGCCCCGCCGGGGGGCTTCACCCCCCGGACCCCCCAGCGTATTTGCACCaa           <  2:2024843/92‑1 (MQ=2)                                            ggccccccccg.GGGGCCCTTTTTGTTTCCGCCGCTGTGTCGCGTGGCGCCCCGCCGGGGGGCTTCGCCCCCCGGACCCCCCAGCGTATTTGCACCAAGaaa       <  2:1954644/96‑1 (MQ=2)                                               cgcCCCCC.GGGGCGCTTTTTTTTTCCGCCCCGCTGCCGCGTGGCGCCCCGCCGGGGGGCTTCGCCCCCCGGACCCCCCAGCGTATTTGCACCAAGAAAAAg    <  2:3166156/101‑1 (MQ=9)                                                 cccccc.GGGCCCCTTTTTGTTTTCCCCCCGCTGCCGCGGGGCGCCCCGCCGGGGGGCTTCGCCCCCCGGACCCCCCAGCGTATTTGCACCAAGAAAAAGCa  <  1:3441584/101‑1 (MQ=2)                                                                                                       |                                                GATGTTGCCGCGCAACTCTGAACGCCGCCGGATGGCATTCAAAAGGCGCCCCCC.GGGGCGCCTTTTGTTTTCGCCACGCTGTCGCGTGGCGACCCGCCG.......TCGCCCCCCGGACCCCCCAGCGTATTTGCACCAAGAAAAAGCA  >  NC_014034/974100‑974241 Base quality scores:  ATCG  < 3 ≤  ATCG  < 31 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG