| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,395,544 | T→C | 21.9% | intergenic (+356/‑575) | RCAP_rcc01306 → / → RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,395,544 | 0 | T→C | 21.9% | 126.0 ‑0.3 ‑1.1 | 342 | intergenic (+356/‑575) | RCAP_rcc01306/RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (23/27): ref base (109/112): total (161/181) | ||||||||||
| Fisher's exact test strand distribution p-value = 7.55e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 8.10e-02 | ||||||||||
Only 100 of 369 total aligned reads displayed.
CCGCGGGGGCGTGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCC > NC_014034/1395444‑1395644
|
ccGCGGGGGCGTGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGt < 1:2491752/101‑1 (MQ=255)
ggggCGTGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTc < 1:144014/101‑1 (MQ=255)
gTGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCa < 2:4350687/101‑1 (MQ=255)
gTGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCa > 1:4107/1‑101 (MQ=255)
tGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACTTGTCGCTCCCCCCGCGGGGGCGTGGGTCGAAACATCTCG.GGGCCGTCCCTCG.Tccgc > 1:3834441/1‑99 (MQ=38)
tGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATTTCG.GAGCGGTCGCTCG.TCCAg > 1:3183057/1‑101 (MQ=255)
tGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAg < 2:4723848/101‑1 (MQ=255)
ggATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGTATGCCGTcttcttcttga > 1:585799/1‑91 (MQ=37)
ggATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGc > 1:3556051/1‑101 (MQ=255)
gATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGcc > 1:392516/1‑101 (MQ=255)
gATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGcc > 1:4532266/1‑101 (MQ=255)
tCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCgg > 2:624837/1‑101 (MQ=255)
cGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTACCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCAGG.c > 2:3911077/1‑101 (MQ=255)
aaaCATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCt > 1:2381793/1‑101 (MQ=255)
cATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCTGCt > 1:501187/1‑101 (MQ=255)
aTCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCTGCtc < 1:211013/101‑1 (MQ=255)
tcgcgtcTTTGGCGGTCGACAGGCTGGTAACGTGTCGCGCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCTGCtcg < 1:4171373/95‑1 (MQ=255)
cgccgcTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCTGCtcgt > 2:45632/1‑101 (MQ=255)
cgccgcTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCTGCtcgt < 2:3369467/101‑1 (MQ=255)
cTTTGGCGGTGGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCTGCTCGTCGCTc < 2:1430966/101‑1 (MQ=255)
cTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCTGCTCGTCGCTc < 1:2547819/101‑1 (MQ=255)
cTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCTGCTCGTCGCTc < 2:4649496/101‑1 (MQ=255)
tGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCTGCTCGTCGCTcccc > 2:2190431/1‑101 (MQ=255)
ggTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCTGCTCGTCGCTCCCCCcgc > 2:2775359/1‑101 (MQ=255)
ggTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCTGCTCGTCGCTCCCCCcgc > 1:1826125/1‑101 (MQ=255)
gTCGACAGGCTGTTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAATCATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCTGCTCGTCGCTCCCCCcgcg < 1:1118426/101‑1 (MQ=255)
gACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGCCGCGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCTGCTCGTCGCTCCCCCCGCgggg < 1:4057090/101‑1 (MQ=255)
gccctcgcacgtCGCTCCCCCCGCGGGGGCGTGGATCTAAACAATGCG.GCGCGGGC.CTAT.GGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTgg < 1:1389997/91‑1 (MQ=0)
ttggaaCGGGTCGCTCCCCCCGCGGGGGGGGTGAACGAAAAATTTCG.GTGCCGTCGCTTC.TCCCCCCGG.GCTGGCCCGCGCCCCCCCCCCcggggggcggg > 2:2005032/5‑95 (MQ=255)
tGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGa > 1:1906517/1‑101 (MQ=255)
tGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGa < 1:851151/101‑1 (MQ=255)
tGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGa > 1:2848444/1‑101 (MQ=255)
gcggccccggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAAAAG.CCGCCGACAAACGCGGCAACCGG.CCCG.GCGTCGCTCCCCCCGCGGGGGCGTGGa < 2:1918271/92‑1 (MQ=2)
aggccggtggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.CCCG.GCGCCGCAGCGAG.TGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGa > 2:650988/10‑101 (MQ=0)
aggccggtggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.CCCG.GCGCCGCAGCGAG.TGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGa < 2:3843602/92‑1 (MQ=0)
cctcgcacgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCG.GCGCGGGC.CTAT.GGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGAt < 1:1379118/93‑1 (MQ=2)
gTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATc > 2:3344045/1‑101 (MQ=255)
gTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATc < 1:1658187/101‑1 (MQ=255)
gTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATc < 2:1805733/101‑1 (MQ=255)
ctcgcacgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCG.GCGCGGGC.CTAT.GGCTGACGGACCCGCCCGTCGCTCCCCCCCCGGGGGCGTGGGTc > 1:4022789/8‑101 (MQ=2)
ccgcacgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCG.GCGCGGGC.CTAT.GGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCg < 2:820492/95‑1 (MQ=2)
cggtggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.CCCG.GCGCCGCAGCGAG.TGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGa < 1:3770669/96‑1 (MQ=2)
cggtggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.CCCG.GCGCCGCAGCGAG.TGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGGGGATCGa > 2:4411374/6‑101 (MQ=2)
aaCGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGa < 1:2722706/101‑1 (MQ=255)
ggtggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.CCCG.GCGCCGCAGCGAG.TGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGaa < 2:1255194/97‑1 (MQ=2)
ggtggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.CCCG.GCGCCGCAGCGAG.TGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGGGGATCGaa > 2:3022902/5‑101 (MQ=2)
gcaagtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCG.GCGCGGGC.CTAT.GGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGaa < 1:625392/97‑1 (MQ=2)
aCGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGaa < 2:1693807/101‑1 (MQ=255)
gtggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.CCCG.GCGCCGCAGCGAG.TGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa < 2:1559291/98‑1 (MQ=2)
cGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa > 1:2920989/1‑101 (MQ=255)
tggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.CCCG.GCGCCGCAGCGAG.TGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAac > 1:3260484/3‑101 (MQ=2)
gtggCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAac < 1:3641727/101‑1 (MQ=255)
ggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.CCCG.GCGCCGCAGCGAG.TGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAact < 2:1065177/100‑2 (MQ=2)
gtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCG.GCGCGGGC.CTAT.GGCTGACGGACCCGCCCGTAGCTCCCCCCGCGGGGGCGTGGATCGAAactg > 2:2257579/1‑99 (MQ=2)
gtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.CCCG.GCGCCGCAGCGAG.TGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAacta < 1:4370427/101‑3 (MQ=2)
tCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAaccac > 2:4085738/1‑101 (MQ=255)
tCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAAAAG.CCGCCGACAAACGCGGCAACCGG.CCCG.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAacccc < 1:1944642/101‑3 (MQ=2)
cGCTCCCCCCGCGGGGGCGTGGATCGAAACA.CCCG.GCGCCGCAGCGAG.TGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactatg > 1:3459559/1‑97 (MQ=2)
cTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCtt < 1:728742/101‑1 (MQ=255)
cTCCCCCCGCGGGGGCGTGGATCGAAACAAAAAG.CCGCCGACAAACGCGGCAACCGG.CCCG.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAaccccgcg > 1:2674708/1‑96 (MQ=2)
cTCCCCCCGCGGGGGCGTGGATCGAAACA.CCCG.GCGCCGCAGCGAG.TGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactatgct < 1:4457710/101‑7 (MQ=2)
tCCCCCCGCGGGGGCGTGGATCGAAACAATGCG.GCGCGGGC.CTAT.GGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactgcgtgc > 2:2490442/1‑94 (MQ=2)
tCCCCCCGCGGGGGCGTGGATCGAAACAAAAAG.CCGCCGACAAACGCGGCAACCGG.CCCG.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAaccccgcgg > 1:4426174/1‑95 (MQ=2)
ccccccGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCTGCTCGTCGTTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGc > 2:4610531/1‑101 (MQ=255)
ccccccGCGGGGGCGTGGATCGAAACAATGCG.GCGCGGGC.CTAT.GGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactgcgtgcg < 1:2019122/101‑9 (MQ=2)
ccccccGCGGGGGCGTGGATCGAAACAAAAAG.CCGCCGACAAACGCGGCAACCGG.CCCG.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAaccccgcggc > 1:748816/1‑94 (MQ=2)
ccccccGCGGGGGCGTGGATCGAAACA.CCCG.GCGCCGCAGCGAG.TGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactatgctgg < 2:314758/101‑9 (MQ=2)
cccccGCGGGGGCGTGGATCGAAACAATGCG.GCGCGGGC.CTAT.GGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactgcgtgcgc < 1:4289501/101‑10 (MQ=2)
cccccGCGGGGGCGTGGATCGAAACA.CCCG.GCGCCGCAGCGAG.TGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactatgctggc < 2:2455227/101‑10 (MQ=2)
ccccGCGGGGGCGTGGATCGAAACAATGCG.GCGCGGGC.CTAT.GGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactgcgtgcgcg > 2:684512/1‑91 (MQ=2)
ccccGCGGGGGCGTGGATCGAAACA.CCCG.GCGCCGCAGCGAG.TGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactatgctggct < 2:516424/101‑11 (MQ=2)
ccGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAt > 2:3237893/1‑101 (MQ=255)
gcgGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTg > 2:306249/1‑101 (MQ=255)
gcgGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTg > 1:1020859/1‑101 (MQ=255)
cgGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGt > 2:2939002/1‑101 (MQ=255)
gggggCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTc < 2:437634/101‑1 (MQ=255)
ggggCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCa < 1:2321534/101‑1 (MQ=255)
ggggCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCa < 1:994310/101‑1 (MQ=255)
gggCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCAc > 1:3052483/1‑101 (MQ=255)
ggCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACt < 2:3710098/101‑1 (MQ=255)
gCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCTGTTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACtt < 2:2618830/101‑1 (MQ=255)
cGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACttt < 1:3505542/101‑1 (MQ=255)
gTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGAGCGAAACCCCCTTGCGCATTGTCTCTTTc > 1:2152672/1‑101 (MQ=38)
tGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTcg > 1:4210841/1‑101 (MQ=255)
ggATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTcgc > 1:1247793/1‑101 (MQ=255)
aaaCATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCg > 1:333957/1‑101 (MQ=255)
aaaCAGCTCG.GTGCCGTCGCTCG.TCCAGCCGG.GCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCg < 2:2111782/101‑1 (MQ=255)
aCATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGaa < 2:392472/101‑1 (MQ=255)
aCATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGaa < 2:2381659/101‑1 (MQ=255)
aTCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGCTTGTCACTTTCGCGGGGGGAAGc > 2:1867702/1‑101 (MQ=255)
aTCTCG.GGGCCGTCGCTCG.TCCGGCCGG.CCTGCGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTGACTTTCGCggggtgtttc > 2:720529/1‑95 (MQ=37)
cG.GTGCCGTCGCTCG.TCCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCg < 2:138735/101‑1 (MQ=255)
cG.GTGCCGTCGCTCG.TCCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCg < 1:3412911/101‑1 (MQ=255)
g.gTGCCGTCGCTCG.TCCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGc < 1:2167422/101‑1 (MQ=255)
gTGCCGTCGCTCG.TCCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCt > 2:388760/1‑101 (MQ=255)
gTGCCGTCGCTCG.TCCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCt < 2:902050/101‑1 (MQ=255)
tGCCGTCGCTCG.TCCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTc > 1:2423082/1‑101 (MQ=255)
cGTCGCTCG.TCCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTcccc > 2:3758313/1‑101 (MQ=255)
gTCGCTCG.TCCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTccccc > 2:1322081/1‑101 (MQ=255)
tCGCTCG.TCCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTcccccc > 2:349316/1‑101 (MQ=255)
|
CCGCGGGGGCGTGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCC > NC_014034/1395444‑1395644
Base quality scores:
ATCG
< 3 ≤
ATCG
< 16 ≤
ATCG
< 24 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|