BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_014034	1,396,805	T→C	14.1%	R229R (CGT→GGC)	RCAP_rcc01307 →	hypothetical protein

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	1,396,805	0	T→C	14.1%	84.7 0.0 ‑0.7	269	R229R (CGT→CGC)	RCAP_rcc01307	hypothetical protein
Reads supporting (aligned to +/- strand): new base (20/18): ref base (123/106): total (144/125)
Fisher's exact test strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 2.03e-01

Only 100 of 294 total aligned reads displayed.


CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTC  >  NC_014034/1396705‑1396905


 gtcgCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCgtg                                                                                                         >  1:749573/1‑101 (MQ=255)


  tcgCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCgtgt                                                                                                        <  1:2132674/101‑1 (MQ=255)


   cgCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGtgtg                                                                                                       >  2:453496/1‑101 (MQ=255)


    gCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTgg                                                                                                      <  1:4218380/101‑1 (MQ=255)


      tCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGga.t                                                                                                   >  2:2566025/1‑101 (MQ=255)


      tCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGAGTGGATCGAAACCGTGGGga.t                                                                                                   >  1:267011/1‑101 (MQ=255)


      tCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGGCGCTCCCCCCCCGGGGGCGTGGATCGACACCCCGTGga.t                                                                                                   >  2:3968417/1‑101 (MQ=37)


       ccccccGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGga.t...g                                                                                               <  2:828609/101‑1 (MQ=255)


       ccccccGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGga.t...g                                                                                               >  2:3338278/1‑101 (MQ=255)


        cccccGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGga.t...ga                                                                                              >  1:526413/1‑101 (MQ=255)


        cccccGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGga.t...ga                                                                                              >  2:3992425/1‑101 (MQ=255)


           ccGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCa                                                                                           <  2:3163059/101‑1 (MQ=255)


              cgGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGc                                                                                        <  1:1673205/101‑1 (MQ=255)


               gggggCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCa                                                                                       <  1:1063439/101‑1 (MQ=255)


               gggggCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCa                                                                                       <  1:4417655/101‑1 (MQ=255)


                  ggCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCTTGGA.T...GATCATGCaccc                                                                                    >  2:3605399/1‑98 (MQ=255)


                    cGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGcgcg                                                                                  <  2:3244835/101‑1 (MQ=255)


                    cGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGTGTGGA.A...GATCATGCAGcacg                                                                                  >  2:4712482/1‑101 (MQ=255)


                     gTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGT.T...GATCATGCAGCGCgg                                                                                 >  2:3387257/1‑101 (MQ=255)


                     gTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCgg                                                                                 >  2:2403500/1‑101 (MQ=255)


                      tGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGa                                                                                <  2:963742/101‑1 (MQ=255)


                      tGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGa                                                                                <  2:2998157/101‑1 (MQ=255)


                           cGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCt                                                                           >  2:3736871/1‑101 (MQ=255)


                            gAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCtt                                                                          >  2:1363078/1‑101 (MQ=255)


                            gAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCtt                                                                          <  1:318019/101‑1 (MQ=255)


                              aaCCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATACCGCGCGGCCCGCGTgg                                                                        >  2:3285357/1‑101 (MQ=37)


                                 ccTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTc                                                                     >  2:800414/1‑101 (MQ=255)


                                 ccTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTc                                                                     <  1:3467380/101‑1 (MQ=255)


                                    gTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCt                                                                  <  2:2152372/101‑1 (MQ=255)


                                       ccTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTccc                                                               >  2:76614/1‑101 (MQ=255)


                                         tCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTccccc                                                             <  2:2836670/101‑1 (MQ=255)


                                         tCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTccccc                                                             <  1:2345766/101‑1 (MQ=255)


                                         tCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTccccc                                                             >  2:3542903/1‑101 (MQ=255)


                                         tCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGATTGGGTCGCTccccc                                                             >  2:888160/1‑101 (MQ=255)


                                          cATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTcccccc                                                            >  1:2171028/1‑101 (MQ=255)


                                           atatGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTccccccc                                                           >  1:3851317/1‑100 (MQ=255)


                                            tatGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGGGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCcgc                                                          >  1:791465/1‑101 (MQ=255)


                                            tatGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCcgc                                                          >  1:570508/1‑101 (MQ=255)


                                              tgctgcCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGCTCGCTCCCCCCGCgg                                                        <  1:4001584/101‑1 (MQ=255)


                                               gctgcCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCggg                                                       >  2:126606/1‑101 (MQ=255)


                                                 tgcCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCggggg                                                     >  2:3905867/1‑101 (MQ=255)


                                                 tgcCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCggggg                                                     >  1:1401983/1‑101 (MQ=255)


                                                 tgcCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCggggg                                                     >  1:2002563/1‑101 (MQ=255)


                                                  gcCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGc                                                    >  1:135136/1‑101 (MQ=255)


                                                  gcCACGATGCCCTTGAGTCGCTCCCCCCGC.GGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCg                                                   <  1:1453855/101‑1 (MQ=255)


                                                   ccACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCg                                                   >  2:1384442/1‑101 (MQ=255)


                                                    cACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCgg                                                  >  1:3438432/1‑100 (MQ=255)


                                                    cACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGGGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCGCCGCggggggcc                                                  >  1:649874/1‑98 (MQ=255)


                                                       gATGCCCTTGAGTCGCTCCCCC..CGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATc                                             >  2:2098062/1‑101 (MQ=255)


                                                        tcacatcgccgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGCGTAGA.TCTCGGTCTGGGTGCGCTCGCGG.TTGCGTCGCTCCCCCCGCGGGGGCGTgg                                                <  2:2595314/91‑1 (MQ=2)


                                                        aTGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGAt                                              >  1:1640768/1‑101 (MQ=255)


                                                         tGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATc                                             <  1:1877014/101‑1 (MQ=255)


                                                          gCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCCCGGGGGCGTGGGTCg                                            >  1:3244869/1‑101 (MQ=255)


                                                           catcgccgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGCGTAGA.TCTCGGTCTGGGTGCGCTCGCGG.TTGCGTCGCTCCCCCCGCGGGGGCGTGGATc                                             >  1:937005/8‑101 (MQ=2)


                                                            atcgccgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGCGTAGA.TCTCGGTCTGGGTGCGCTCGCGG.TTGCGTCGCTCCCCCCGCGGGGGCGTGGATCg                                            <  1:3528556/95‑1 (MQ=2)


                                                             cTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                         <  1:397435/101‑1 (MQ=255)


                                                              cgccgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGCGTAGA.TCTCGGTCTGGGTGCGCTCGCGG.TTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                          >  2:4473559/5‑101 (MQ=2)


                                                               gccgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGCGTAGA.TCTCGGTCTGGGTGCGCTCGCGG.TTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                         <  1:2472501/98‑1 (MQ=2)


                                                                ccgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGCGTAGA.TCTCGGTCTGGGTGCGCTCGCGG.TTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc                                        <  1:1728763/99‑1 (MQ=2)


                                                                ccgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGCGTAGA.TCTCGGTCTGGGTGCGCTCGCGG.TTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc                                        >  2:4131594/3‑101 (MQ=2)


                                                                  gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGCGTAGA.TCTCGGTCTGGGTGCGCTCGCGG.TTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcat                                      <  1:4277223/101‑3 (MQ=2)


                                                                   tCGCTCCCCCCGCGGGGGGGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTc                                   <  1:4181123/101‑1 (MQ=255)


                                                                   tCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGCGTAGA.TCTCGGTCTGGGTGCGCTCGCGG.TTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcatg                                     >  2:4159995/1‑98 (MQ=2)


                                                                    cGCTCCCCCCGCGGGGGCGTGGATCGAAACGGCGTAGA.TCTCGGTCTGGGTGCGCTCGCGG.TTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcatgg                                    <  2:3343935/101‑5 (MQ=2)


                                                                    cGCTCCCCCCGCGGGGGCGTGGATCGAAACGGCGTAGA.TCTCGGTCTGGGTGCGCTCGCGG.TTGCGTCGCTCCCCCCGCGGGGGCGGGGATCGACAcatgg                                    >  2:1121449/1‑97 (MQ=2)


                                                                    cGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCCGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGATACCGGTcc                                  <  2:1780785/101‑1 (MQ=255)


                                                                    cGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTcc                                  <  2:2010521/101‑1 (MQ=255)


                                                                    cGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCCCCCCCCGCGGGGGCGGGGATCGAAACCGGGcc                                  >  1:2246842/1‑101 (MQ=255)


                                                                     gCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCa                                 >  1:2878921/1‑101 (MQ=255)


                                                                      cTCCCCCCGCGGGGGCGTGGATCGAAACGGCGTAGA.TCTCGGTCTGGGTGCGCTCGCGG.TTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcatggct                                  >  2:2290199/1‑95 (MQ=2)


                                                                      cTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCag                                <  1:2035533/101‑1 (MQ=255)


                                                                       tCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCaga                               >  1:3061794/1‑101 (MQ=255)


                                                                        ccccccGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCagag                              <  2:465693/101‑1 (MQ=255)


                                                                        ccccccGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCagag                              >  1:4521439/1‑101 (MQ=255)


                                                                         cccccGCGGGGGCGTGGATCGAAACGGCGTAGA.TCTCGGTCTGGGTGCGCTCGCGG.TTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcatggctatg                               <  2:1892419/101‑10 (MQ=2)


                                                                          ccccGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGAt                            >  1:2070552/1‑101 (MQ=255)


                                                                          ccccGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGAt                            <  1:152459/101‑1 (MQ=255)


                                                                           cccGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATa                           <  1:3637867/101‑1 (MQ=255)


                                                                           cccGCGGGGGCGTGGATCGAAACCG.GTCCAGA...GAT.AGACCGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAg                          <  2:2067156/101‑1 (MQ=11)


                                                                              gcgGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGAc                        <  2:1562112/101‑1 (MQ=255)


                                                                               cgGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGAcc                       >  1:2762696/1‑101 (MQ=255)


                                                                               cgGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGAcc                       <  2:597516/101‑1 (MQ=255)


                                                                                gggggCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACcg                      >  2:997699/1‑101 (MQ=255)


                                                                                 ggggCGTGAATCGAAACCGTGTGGA.G...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGGGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACcgc                     <  2:2535560/101‑1 (MQ=255)


                                                                                  gggCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACcgcg                    <  2:4246026/101‑1 (MQ=255)


                                                                                  gggCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACcgcg                    >  1:3741817/1‑101 (MQ=255)


                                                                                      gTGGATCGAAACCGTGTGGA.T...GATCATGCATCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGa                >  1:999129/1‑101 (MQ=255)


                                                                                      gTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGa                >  1:466652/1‑101 (MQ=255)


                                                                                       tGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGAc               <  2:3438225/101‑1 (MQ=255)


                                                                                       tGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGAc               >  1:1111625/1‑101 (MQ=255)


                                                                                         gATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGAcct             <  1:4569135/101‑1 (MQ=255)


                                                                                           tCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGAcctcc           >  1:2051731/1‑101 (MQ=255)


                                                                                             gAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACctcctc         >  2:2374583/1‑101 (MQ=255)


                                                                                             gAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACctcctc         <  1:3343698/101‑1 (MQ=255)


                                                                                              aaaCCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCa        >  2:2234421/1‑101 (MQ=255)


                                                                                              aaaCCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCa        >  2:1739765/1‑101 (MQ=255)


                                                                                              aaaCCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCa        <  2:1338470/101‑1 (MQ=255)


                                                                                              aaaCCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCa        >  2:3212944/1‑101 (MQ=255)


                                                                                                  cGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACg    <  1:1242868/101‑1 (MQ=255)


                                                                                                    tgtgGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTc  <  2:4337147/101‑1 (MQ=255)


CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTC  >  NC_014034/1396705‑1396905

Base quality scores:


ATCG

< 3 ≤


ATCG

< 18 ≤


ATCG

< 27 ≤


ATCG

< 33 ≤


ATCG

< 41 ≤


ATCG