| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,044,275 | A→G | 9.1% | intergenic (+148/+29) | typA → / ← potG1 | GTP‑binding protein TypA/BipA/polyamine ABC transporter ATP‑binding protein PotG |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,044,275 | 0 | A→G | 9.1% | 22.6 ‑2.5 ‑0.0 | 155 | intergenic (+148/+29) | typA/potG1 | GTP‑binding protein TypA/BipA/polyamine ABC transporter ATP‑binding protein PotG |
| Reads supporting (aligned to +/- strand): new base (9/6): ref base (115/25): total (124/31) | ||||||||||
| Fisher's exact test strand distribution p-value = 8.09e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.51e-01 | ||||||||||
Only 100 of 200 total aligned reads displayed.
ATTCACCTCCCCCCGGGATATTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGCAAAAAAGGGGGG.CGCGAAGCCCCCCTTTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCACCCGCGTCTGGGTGCCGACATCCAGCACCGGGCGA > NC_014034/2044178‑2044376
|
aTTCACCTCCCCCCGGGATATTTGAGGCAAGATAAAGACTTGCGAGGGGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGCAAAAAGggg > 1:185045/1‑101 (MQ=255)
ttCACCTCCCCCCGGGATATTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGCAAAAAGgggg > 1:4520318/1‑101 (MQ=255)
ttCACCTCCCCCCGGGATATTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGCAAAAAGgggg < 1:2539096/101‑1 (MQ=255)
tCACCTCCCCCCGGGATATTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGCAAAAAGggggg > 1:1892177/1‑101 (MQ=255)
cACCTCCCCCCGGGATATTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGCAAAAAGgggggc > 2:2398426/1‑100 (MQ=255)
cACCTCCCCCCGGGATATTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGCAAAAAGgggggc > 1:806864/1‑100 (MQ=255)
gccTCCCCCCGGGATATTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGg.cg < 2:4294555/100‑1 (MQ=255)
aCCTCCCCCCGGGATATTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGg.cg < 2:4530036/101‑1 (MQ=255)
ccTCCCCCCGGGATATTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGg.cgc > 1:2733528/1‑101 (MQ=255)
ccccccGGGATATTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGaa < 1:162070/101‑1 (MQ=255)
cccccGGGATATTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAg < 2:3067742/101‑1 (MQ=255)
ccccGGGATATTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGc < 1:4224784/101‑1 (MQ=255)
cGGGATATTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGcccc < 2:3811841/101‑1 (MQ=255)
gggATATTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGccccc < 2:4704875/101‑1 (MQ=255)
gggATATTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGccccc < 1:676130/101‑1 (MQ=255)
tatTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCGAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGCCCCCCttt > 2:2741956/1‑101 (MQ=255)
tatTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGCCCCCCttt > 1:144933/1‑101 (MQ=255)
tatTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGCCCCCCttt < 2:4434552/101‑1 (MQ=255)
atTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGCCCCCCtttt > 2:458293/1‑101 (MQ=255)
atTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGCCCCCCtttt > 2:3324751/1‑101 (MQ=255)
atTTGAGGCAAGATAAAGACTTGCGACGTGTTCTTCATCTTTCTACAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGCCCCCCtttt < 2:4703122/101‑1 (MQ=255)
tttGAGGAAAGATAAAGCCTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGCCCCCCttttt < 2:658436/101‑1 (MQ=255)
ttGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGCCCCCCtttttc > 1:522927/1‑100 (MQ=255)
tGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGCCCCCCtttttcc > 1:1212873/1‑99 (MQ=255)
gAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGCCCCCCtttttccg > 1:1055919/1‑98 (MQ=255)
gCAAGATAAAGACTTGCGAGGTGTTCTTCATTTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGACGCCCCCC.GTTTTCCGTCa > 2:159231/1‑101 (MQ=255)
gCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCa > 1:3397081/1‑101 (MQ=255)
gCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCa > 2:2215410/1‑101 (MQ=255)
cAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAg > 1:1932110/1‑101 (MQ=255)
cAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAg > 2:4401293/1‑101 (MQ=255)
aGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCg > 1:2580543/1‑101 (MQ=255)
aTAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCGaa > 2:3626346/1‑101 (MQ=255)
tAAAGACTTGCGAGGTGTTCTTCATGTTTCTGCAAAGA.CCGCGGGGGG.AACTTGCAGAGC.AAAAAGTGGGG.GGCGAAGCGGCCC.TTTTTCCGTCAGCGaaa > 2:2916379/1‑101 (MQ=255)
aaaGACTTGCGAGGTTTTTTTCATTTTTCTGAAAAGC.CCGGGGGGGG.AATTTGCACAG.AAAAAAGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCGAAAc < 1:3504072/101‑1 (MQ=255)
aaaGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCGAAAc > 1:260490/1‑101 (MQ=255)
aaGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCGAAACa > 2:1751240/1‑101 (MQ=255)
aGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCGAAACAg > 2:2536706/1‑101 (MQ=255)
gACTTGCGAGGTTTTCTTCATCTTTCTGAAAAGA.CCGGGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCGAAACAGc < 2:3089714/101‑1 (MQ=255)
aagctgtggtgtgtTTTTCTTCTTTTTCCAAAAAGCCGGGGGGGGAAATTTGC.CAAAAAAAAGGGGGGG.CCGCCCCCCCCCCCTTTTTCCGTCAGCGAAAc < 1:1979021/91‑1 (MQ=255)
ttgggggggTTTTCTTCTTCTTCCGGAAAAGC.CCG.GGGGGG.AATTTGGCAAAAAAAAAGGGGGGG.CGC.AACCCCCCCCTTTTTCCGTCAGCGAAACAGCAc < 1:1190861/94‑1 (MQ=255)
cTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCGAAACAGCAc > 2:13225/1‑101 (MQ=255)
cTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGCCCCCC.TTTTTCAGTCAGCGAAACAGCAc > 1:1506369/1‑101 (MQ=255)
cGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGCGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAgc < 2:1647260/101‑1 (MQ=255)
gAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAgcg > 2:2436520/1‑101 (MQ=255)
gAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAgcg > 1:1690962/1‑101 (MQ=255)
gAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAgcg > 1:4214829/1‑101 (MQ=255)
aGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAgcgc > 2:1402098/1‑101 (MQ=255)
aGGTGTCCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAgcgc < 2:593723/101‑1 (MQ=255)
tgtTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGcc > 1:1398632/1‑101 (MQ=255)
gtTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCGAATCAGCACCAGCGCGCCg > 1:2930938/1‑101 (MQ=255)
tcttcATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCggg > 1:1759606/1‑101 (MQ=255)
tcttcATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCggg > 1:3633683/1‑101 (MQ=255)
tcATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGa > 2:755741/1‑101 (MQ=255)
cTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAg > 1:318626/1‑101 (MQ=255)
cTTTCTGCAAAGA.CCGCGGGGGG.AATTTCCACAGCAAAAAA.GGGGG.CGGGAAGCCCCCC.TTTTTCCGTCGGCGAAACAGCACGAGCGCGCCGCGCGACCAg > 1:3914893/1‑101 (MQ=255)
cTTTCTGAAAAGC.CCGCGGGGGA.AATTTGCACAGC.AAAAAGGGGGG.CGCGAA.CCCCCCCTTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAg < 1:2293865/101‑1 (MQ=255)
tttCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAgg > 2:820088/1‑101 (MQ=255)
tttCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAgg > 1:1290095/1‑101 (MQ=255)
ttCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGc > 1:460674/1‑101 (MQ=255)
ttCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGc > 1:3065464/1‑101 (MQ=255)
tCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGcc > 1:4471471/1‑101 (MQ=255)
tCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGcc > 1:717605/1‑101 (MQ=255)
cTGAAAAGA.CCTCGGGGGG.AATTTGCACAGC.AAAAGGGGGGG.CGCGAA.CCCCCCCTTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCa < 2:3140801/101‑1 (MQ=255)
gCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCAcc > 2:1462942/1‑101 (MQ=255)
gCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCAcc > 1:4356214/1‑101 (MQ=255)
gaaagcgccGGGGGGGA.AATGTCCACAGC.AAAAGGGGGGG.CGAG.ACCCCCCCCTTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCAcc < 2:4607861/94‑1 (MQ=255)
ggagagcccggggggg.AAAATGCCAAGAAAAAAGGGGGGGCCGCCACCCCCCCCTTTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCa < 2:4056182/91‑1 (MQ=255)
aaaGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCGAGCCAGCACCAGCGCGCCGGGCGACCAGGCCACCcg > 1:4074974/1‑101 (MQ=255)
aaaGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCACCcg > 2:4466188/1‑101 (MQ=255)
aaaGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCACCcg > 2:1051207/1‑101 (MQ=255)
aaaGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCACCcg > 2:2001444/1‑101 (MQ=255)
gA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCAGCCGCGt > 1:772566/1‑101 (MQ=255)
gA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCACCCGCGt > 2:34058/1‑101 (MQ=255)
gA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCACCCGCGt > 1:4453409/1‑101 (MQ=255)
a.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCACCCGCGTc > 1:4293476/1‑101 (MQ=255)
gggtg.AAGTTGCACCGC.AAAAAGGGGGG.CGCGAAACCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCACCCGCGTCTGGGTg < 2:3171625/101‑1 (MQ=255)
ggggg.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCACCCGCGTCTGGGTg > 1:822229/1‑101 (MQ=255)
ggg.AATTTGCACAGC.AAAAGGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCACCCGCGTCTGGGTGcc < 1:4717039/101‑1 (MQ=255)
gg.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCACCCGCGTCTGGGTGCCg > 2:2206611/1‑101 (MQ=255)
gg.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCACCCGCGTCTGGGTGCCg > 1:303805/1‑101 (MQ=255)
gg.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGCCCCCC.TTTTTCCGGCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCACCCGCGTCTGCGTGCCg > 2:2077332/1‑101 (MQ=255)
g.AATTTGCACAGC.AAAAAGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCACCCGCGTCTGGGTGCCGa > 2:3082405/1‑101 (MQ=255)
tGCACAGC.AAAAAGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCACCCGCGTCTGGGTGCCGACATcc > 2:1793144/1‑101 (MQ=255)
tcacaGC.AAAAAGGGGGG.CGCGAA.CCCCCCCTTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCACCCGCGTCTGGGTGCCGACATCCa < 2:2281517/100‑1 (MQ=255)
cacaGC.AAAAAGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCACCCGCGTCTGGGTGCCGACATCCAg > 1:2279217/1‑101 (MQ=255)
cacaGC.AAAAAGGGGGG.CGC.AAACCCCCCCTTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCACCCGCGTCTGGGTGCCGACATCCAg < 2:275621/101‑1 (MQ=255)
cgcagcaaaagGGGGGG.CGCGAGGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCACCCGCGTCTGGGTGCCGACATCCAg < 1:643568/95‑1 (MQ=255)
acaGC.AAAAAGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCACCCGCGTCTGGGTGCCGACATCCAGc > 1:1896142/1‑101 (MQ=255)
gagcaaaagGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCACCCGCGTCTGGGTGCCGACATCCAGCa < 2:4744054/97‑1 (MQ=255)
aaaaaGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCACCCGCGTCTGGGTGCCGACATCCAGCACCgg > 2:4244023/1‑101 (MQ=255)
aaaaaGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCACCCGCGTCTGGGTGCCGACATCCAGCACCgg < 1:498804/101‑1 (MQ=255)
aaaaaGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCACCCGCGTCTGGGTGCCGACATCCAGCACCgg > 2:2600276/1‑101 (MQ=255)
aaaaaGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCACCCGCGTCTGGGTGCCGACATCCAGCACCgg > 1:3678845/1‑101 (MQ=255)
aaaaGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCACCCGCGTCTGGGTGCCGACATCCAGCACCggg < 1:2324468/101‑1 (MQ=255)
aaaGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCACCCGCGTCTGGGTGCCGACATCCAGCACCGGGc > 2:1110571/1‑101 (MQ=255)
aaGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCGAAACAGGACCAGCGCGCCGGGCGACCGGGCGACCCCCCGCTGGGTGCCGACATCCAACACCGGCCg > 2:1903149/1‑101 (MQ=255)
aaGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCACCCGCGTCTGGGTGCCGACATCCAGCACCGGGCg > 2:3515919/1‑101 (MQ=255)
aGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCACCCGCGTCTGGGTGCCGACATCCAGCACCGGGCgc > 2:3887834/1‑100 (MQ=255)
aGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCACCCGCGTCTGGGTGCCGACATCCAGCACCGGGCGa > 2:534676/1‑101 (MQ=255)
aGGGGGG.CGCGAAGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCACCCGCGTCTGGGTGCCGACATCCAGCACCGGGCGa > 2:4035154/1‑101 (MQ=255)
|
ATTCACCTCCCCCCGGGATATTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGCAAAAAAGGGGGG.CGCGAAGCCCCCCTTTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCACCCGCGTCTGGGTGCCGACATCCAGCACCGGGCGA > NC_014034/2044178‑2044376
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 29 ≤
ATCG
< 34 ≤
ATCG
< 40 ≤
ATCG
|