| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,249,333 | G→C | 4.2% | intergenic (‑129/‑176) | parE ← / → RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,249,333 | 0 | G→C | 4.2% | 10.3 ‑3.2 ‑0.0 | 213 | intergenic (‑129/‑176) | parE/RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Reads supporting (aligned to +/- strand): new base (1/8): ref base (97/106): total (98/115) | ||||||||||
| Fisher's exact test strand distribution p-value = 3.98e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.74e-01 | ||||||||||
Only 100 of 234 total aligned reads displayed.
TGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.G.CCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CG.CCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCG > NC_014034/2249234‑2249432
|
cacaGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCt > 1:3122530/1‑101 (MQ=255)
acaGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCtt > 2:1077867/1‑101 (MQ=255)
acaGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCtt > 1:2131775/1‑101 (MQ=255)
caGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCttt < 2:3351928/101‑1 (MQ=255)
aGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTc < 1:3604567/101‑1 (MQ=255)
aTACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCAt < 2:1681112/101‑1 (MQ=255)
tACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATc > 1:3635466/1‑101 (MQ=255)
aCCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCt < 2:2447652/101‑1 (MQ=255)
aCCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCt < 2:3535093/101‑1 (MQ=255)
ccGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCtt < 2:3219537/101‑1 (MQ=255)
ccGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCtt < 1:1730877/101‑1 (MQ=255)
cAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGcc < 1:344655/101‑1 (MQ=255)
aGCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCAtagatcgg > 2:3893807/1‑94 (MQ=37)
aGCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCg < 2:2876313/101‑1 (MQ=255)
gCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGa > 2:3153886/1‑101 (MQ=255)
cTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGaa > 1:1738481/1‑101 (MQ=255)
cTTGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGaa > 1:4492283/1‑101 (MQ=255)
gggCACCCGGGGCAAGAAGGGGGCTCT.GCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAat < 1:765147/101‑1 (MQ=255)
gggCACCCGGGGCAAGAAGGGGGCTCT.GCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAat < 1:2093568/101‑1 (MQ=255)
ggCACCCGGGGCAAGAAGGGGGCTCT.GCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAata < 1:3749929/101‑1 (MQ=255)
gCACCCGGGGCAAGAAGGGGGCTCT.GCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAatat < 2:808356/101‑1 (MQ=255)
cACCCGGGGCAAGAAGGGGGCTCT.GCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATc < 1:2507587/101‑1 (MQ=255)
cACCCGGGGCAAGAAGGGGGCTCT.GCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATc > 2:2456024/1‑101 (MQ=255)
aCCCGGGGCAAGAAGGGGGCTCT.GCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATcg < 1:1446144/101‑2 (MQ=255)
aCCCGGGGCAAGAAGGGGGCTCT.GCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATcc < 2:447138/101‑1 (MQ=255)
aCCCGGGGCAAGAAGGGGGCTCT.GCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATcc > 2:4658457/1‑101 (MQ=255)
cccGGGGCAAGAAGGGGGCTCT.GCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATccc > 1:956930/1‑101 (MQ=255)
ccGGGGCAAGAAGGGGGCTCT.GCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCg < 2:2943062/101‑1 (MQ=255)
ggggCAAGAAGGGGGCTCT.GCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCggg < 2:2131654/101‑1 (MQ=255)
gggCAAGAAGGGGGCTCT.GCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCgggg > 2:3269850/1‑101 (MQ=255)
gCAAGAAGGGGGCTCT.GCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCgggggg < 2:219761/101‑1 (MQ=255)
gCAAGAAGGGGGCTCT.GCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCgggggg > 2:3089151/1‑101 (MQ=255)
aagaagGGGGCTCTAC.CCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCgggggggg > 2:4733758/1‑99 (MQ=255)
aagaagGGGGCTCT.GCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTg < 1:4301777/101‑1 (MQ=255)
agaagGGGGCTCT.GCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGGGa > 2:4347125/1‑101 (MQ=255)
gaagGGGGCTCT.GCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGaa < 1:2897477/101‑1 (MQ=255)
aagGGGGCTCT.GCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAAt < 1:2366384/101‑1 (MQ=255)
agGGGGCTCT.GCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATg < 1:2222555/101‑1 (MQ=255)
agGGGCCTCT.GCCCCCGTCCCGTGCCGGGACT.CCCCCGGT.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATg < 1:4413950/101‑1 (MQ=38)
ggggCTCT.GCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGgc < 1:1297624/101‑1 (MQ=255)
ggggCTCT.GCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGgc > 2:3586307/1‑101 (MQ=255)
ggggCTCT.GCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGgc > 2:674612/1‑101 (MQ=255)
gggCTCT.GCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGgcg > 1:4157999/1‑101 (MQ=255)
ggCTCT.GCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGgcgc < 1:110420/101‑1 (MQ=255)
tctgcccccGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGc > 1:999976/6‑101 (MQ=255)
gcccccGTCCCCTGCCGGGGCT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCag < 1:2817521/99‑1 (MQ=255)
cccccGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCaga > 2:4300532/2‑101 (MQ=255)
cccgtcccgtGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAgg > 1:2206632/1‑101 (MQ=255)
ccgtcccgtGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCAGGGGGGTGAATGGCGCAGCCAGAggg < 2:1978608/101‑1 (MQ=255)
cgtcccgtGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAgggg > 1:4450149/1‑101 (MQ=255)
ccgtGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCa > 2:4528299/1‑101 (MQ=255)
ccgtGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCa > 2:2747181/1‑101 (MQ=255)
cgcaagcggACTCCCCCCGGG.ATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGCGAAGCCAGAggggg < 1:3922950/94‑1 (MQ=18)
gtGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGTAAATATCCCGGGGGGGGAATGGCGCAGCCAGAGGGGGGCAg.c > 2:4617883/1‑101 (MQ=255)
gcaagcggACTCCCCCCGGG.ATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGCGAAGCCAGAgggggg < 1:3576625/95‑1 (MQ=18)
tGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAg.cg < 2:4149620/101‑1 (MQ=255)
tGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAg.cg > 2:82292/1‑101 (MQ=255)
tGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAg.cc > 2:1468707/1‑100 (MQ=255)
ccGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CG.cc > 1:3550859/1‑101 (MQ=255)
ccattcaccccccGGG.ATATTTTCGGCAAGATGAA...AGCCCCCCTTCATCTTGCCGAAAATATCCCGGGGGGCGAATGGCGCAGCCATAGGGGGGCAG.CG.cc > 2:3809676/9‑101 (MQ=11)
ggACTCCCCCCGGG.ATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGCGAAGCCAGAGGGGGGCAg.cg.c < 1:527047/101‑1 (MQ=17)
gACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CG.ccc.ccc < 1:737818/101‑2 (MQ=255)
gACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CG.ccc.ccc > 1:4029250/1‑100 (MQ=255)
aCT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CG.ccc.ccct < 2:3656213/101‑3 (MQ=255)
aCT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CG.ccc.ccct > 2:4380080/1‑99 (MQ=255)
cT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CG.ccc.ccctt < 1:3089351/101‑4 (MQ=255)
cT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CG.ccc.ccctt < 1:3889935/101‑4 (MQ=255)
t.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CG.ccc.cccttc < 2:1608705/101‑5 (MQ=255)
t.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CG.ccc.cccttc < 1:1557905/101‑5 (MQ=255)
cccccccGGGAATTTTGGAGGAAAGAGGAG...GGGGGGTTTTCTTTTTGCAAAAATTACCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CG.ccc.ccct < 1:3981906/99‑3 (MQ=12)
gcccccGGG.ATATTTGGGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CG.ccc.cccttc < 1:4347372/100‑5 (MQ=255)
cccccGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CG.ccc.cccttcg < 1:4528552/101‑6 (MQ=255)
cccGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGCCCC.CCTTcgcg < 2:1213634/101‑1 (MQ=255)
ccGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGCCCC.CCTTCgcgg < 2:607886/101‑1 (MQ=255)
cGGG.ATATTTGAGGCAAGATGAA...GGGGGTCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGCCCC.CCTTCgcggg < 2:180712/101‑1 (MQ=255)
cGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGCCCC.CCTTCgcggg > 1:851451/1‑101 (MQ=255)
ggg.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGCCCC.CCTTCgcgggc > 2:487361/1‑101 (MQ=255)
gg.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGCCCC.CCTTCgcgggcg < 1:2643380/101‑1 (MQ=255)
g.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGCCCC.CCTTCgcgggcgg > 2:3999898/1‑101 (MQ=255)
tatTTGAGGCAAGATGAG...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGCCCC.CCTTCGCGGGCGGcc < 2:3019066/101‑1 (MQ=255)
tatTTGAGGCAAGAGGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGCCCC.CCTTCGCGGGCGGcc < 1:3167913/101‑1 (MQ=255)
atTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGCCCC.CCTTCGCGGGCGGccc > 1:106802/1‑100 (MQ=255)
atTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGCCCC.CCTTCGCGGGCGGCcg > 2:2656498/1‑101 (MQ=255)
tGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGCCCC.CCTTCGCGGGCGGCCGCGa > 1:170387/1‑101 (MQ=255)
tGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGCGAATGGCGCAGCCAGAGGGGGGCAG.CGCCCC.CCTTCGCGGGCGGCCGCGa > 1:1903821/1‑101 (MQ=255)
gAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGCCCC.CCTTCGCGGGCGGCCGCGAc < 1:1953156/101‑1 (MQ=255)
gggaaaGATGAG...GGGGGGTTTTCATCTTCCCGAAAATACCGGGGGGGGGGAAGGGCGCAGCCAGGGGGGGGCAGCCC.CCC.CCTTCGCGGGCGGCCGCGAcg < 1:3329894/97‑1 (MQ=255)
gCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGCCCC.CCTTCGCGGGCGGCCGCGAcgcg > 1:1395202/1‑101 (MQ=255)
aaGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGCCCC.CCTTCGCGGGCGGCCGCGAcgcgcg > 2:3307546/1‑101 (MQ=255)
aGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGCCCC.CCTTCGCGGGCGGCCGCGACgcgcgc > 2:3871958/1‑101 (MQ=255)
aGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGCCCC.CCTTCGCGGGCGGCCGCGACgcgcgc > 2:1297249/1‑101 (MQ=255)
gATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGCCCC.CCTTCGCGGGCGGCCGCGACGCGcgcc < 2:2847709/101‑1 (MQ=255)
aTGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGCCCC.CCTTCGCGGGGGGCCGCGACGCGggccg > 1:2914682/1‑101 (MQ=25)
tGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGCCCC.CCTTCGCGGGCGGCCGCGACGCGccccac > 2:3969880/1‑99 (MQ=255)
a...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGCCCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAAc > 1:2704383/1‑101 (MQ=255)
ggggggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGCCCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACa < 1:2747345/101‑1 (MQ=255)
ggggggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGCCCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACa > 1:2461999/1‑101 (MQ=255)
gggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CG.CCCGCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGt > 2:243587/1‑101 (MQ=255)
ggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGCCCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTc < 2:4536517/101‑1 (MQ=255)
gCTTTCATCTTGCCGAAAATATCCCGGGGGGGGAATGGCGCAGCCAGAGGGGGGCAG.GGCCCC.CCTTCCCGGGCGGCCGCGCGGCGCGCCGCacaaggccg > 2:1752640/1‑93 (MQ=25)
|
TGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.G.CCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CG.CCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCG > NC_014034/2249234‑2249432
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|