| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,249,379 | G→A | 2.4% | intergenic (‑175/‑130) | parE ← / → RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,249,379 | 0 | G→A | 2.4% | 5.0 0.0 ‑1.0 | 209 | intergenic (‑175/‑130) | parE/RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Reads supporting (aligned to +/- strand): new base (3/2): ref base (114/90): total (117/92) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.00e+00 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.14e-02 | ||||||||||
Only 100 of 240 total aligned reads displayed.
TGCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG.C.C.CCC..TTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCAT > NC_014034/2249279‑2249478
|
gcccccGTCCCCTGCCGGGGCT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCag < 1:2817521/99‑1 (MQ=255)
cccgtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAgg > 1:2206632/1‑101 (MQ=255)
cgtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAgggg > 1:4450149/1‑101 (MQ=255)
cgtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGGGAA.TGGCGCA..GCCAGAgggg > 2:2556298/1‑101 (MQ=255)
ccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCa > 2:2215383/1‑101 (MQ=255)
ccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGAGGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCa < 2:3214748/101‑1 (MQ=255)
cgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAg < 2:285407/101‑1 (MQ=255)
cgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAg > 2:2785752/1‑101 (MQ=255)
cgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGGGAA.TGGCGCA..GCCAGAGGGGGGCAg > 1:1718570/1‑101 (MQ=255)
cgcaagcggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAT..G..CCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAggggg < 1:3922950/94‑1 (MQ=18)
gcaagcggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAT..G..CCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAgggggg < 2:4360232/95‑1 (MQ=18)
gcaagcggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAT..G..CCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAgggggg < 1:3576625/95‑1 (MQ=18)
tGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAg.cg > 2:717203/1‑101 (MQ=255)
tGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAg.cg > 2:82292/1‑101 (MQ=255)
tGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAg.cc > 2:1468707/1‑100 (MQ=255)
gCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAg.cg.c > 1:233057/1‑101 (MQ=255)
gcggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAT..G..CCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAGGGGGGCAg.c < 1:991578/99‑1 (MQ=18)
ccattcaccccccGGGATATTTTCGGCAAGATGAA...AGCC..C..CCCTTCATCTTGCCGAAAATATCCCGGGGGGCGAA.TGGCGCA..GCCATAGGGGGGCAG.CG.c.c > 2:3809676/9‑101 (MQ=11)
gACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG.c.c.cccc < 1:737818/101‑2 (MQ=255)
cT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTCCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG.c.c.cccctt < 1:4020275/101‑4 (MQ=255)
cccccGGGATATTTGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG.c.c.ccccttcg > 1:812051/1‑96 (MQ=255)
cccccGGGATATTTGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG.c.c.ccccttcg < 1:4528552/101‑6 (MQ=255)
cccccGGGATATTTGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG.c.c.ccccttcg < 2:677650/101‑6 (MQ=255)
cccccGGGATATTTGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGAGAA.TGGCGCA..GCCAGAGGGGGGCAT.CG.C.CGCCC..TTcg > 1:1534838/1‑101 (MQ=25)
cccGGGATATTTGCGGCAAGATGAA...GGGGCAT..GATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAAAGGCCAAGAGGGGGCAG.CG.C.C.CCC..tgc < 2:4544891/101‑3 (MQ=0)
cccGGGATATTTGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTcgcg < 2:1213634/101‑1 (MQ=255)
ccGGGATATTTGAGGCAAGATGAA...GGGG..T..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCgcgg < 2:305186/101‑1 (MQ=255)
ccGGGATATTTGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCgcgg < 2:607886/101‑1 (MQ=255)
cGGGATATTTGCGGCAAGATGAA...GGGGCAT..GATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAAAGGCCAAGAGGGGGCAG.CG.C.C.CCC..tgccc > 2:2731666/1‑97 (MQ=0)
cGGGATATTTGCGGCAAGATGAA...GGGG..CATGATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAAAGGCCAAGAGGGGGCAG.CG.C.C.CCC..tgccc > 2:3553439/1‑97 (MQ=2)
gggATATTTGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCgcgggc > 2:487361/1‑101 (MQ=255)
ggATATTTGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCgcgggcg > 1:2113736/1‑101 (MQ=255)
atatTTGAGGCAAGATGAA...GGGG..G..GCTTTCACCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGggcggc > 1:4206156/1‑101 (MQ=255)
tatTTGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGcc > 2:2176177/1‑101 (MQ=255)
tatTTGAGGCAAGAGGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGcc < 1:3167913/101‑1 (MQ=255)
atTTGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGccc > 1:106802/1‑100 (MQ=255)
atTTGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCcg > 2:1946907/1‑101 (MQ=255)
tttGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATGTCCCGGGGGGTGAA.TGGCGGA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCcgc < 1:2774647/101‑1 (MQ=37)
tGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCCGCGa > 1:170387/1‑101 (MQ=255)
tGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCCGCGa > 1:3362466/1‑101 (MQ=255)
gAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCCGCGAc < 1:2674363/101‑1 (MQ=255)
aaGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCCGCGAcgcgcg > 2:3307546/1‑101 (MQ=255)
aGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCCGCGACgcgcg.c > 2:3871958/1‑101 (MQ=255)
aGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCCGCGACgcgcg.c > 2:1297249/1‑101 (MQ=255)
gATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCCGCGACGCGcg.cc < 1:4351254/101‑1 (MQ=255)
aTGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCCGCGACGCGcg.ccg > 2:3922272/1‑101 (MQ=255)
tGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCCGCGACGCGcc.ccac > 2:3969880/1‑99 (MQ=255)
a...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCCGCGACGCGCG.CCGCAAc < 2:244620/101‑1 (MQ=255)
gggg..g..gCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCCGCGACGCGCG.CCGCAACa > 1:2461999/1‑101 (MQ=255)
gggg..g..gCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCCGCGACGCGCG.CCGCAACa < 1:2747345/101‑1 (MQ=255)
gg..g..gCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCCGCGACGCGCG.CCGCAACAgg > 2:4531718/1‑101 (MQ=255)
g..gCTTTGATCTTGCCGAAACTAGCCCGGGGGGTGAA.TGGCGCA..GCCAGGGGGGGGCGG.CGCC.C.CCC..TTCGCGGGCGGCCGCGAGGCGCG.CCGCAACAGGTc < 2:4687873/101‑1 (MQ=25)
g..gCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTc < 1:3663229/101‑1 (MQ=255)
gCTTTCATCTTGCCGAAAATATCCCGGGGGGGGAA.TGGCGCA..GCCAGAGGGGGGCAG.GGCC.C.CCC..TTCCCGGGCGGCCGCGCGGCGCG.CCGCacaaggccg > 2:1752640/1‑93 (MQ=25)
tttCTTCTGGCGAAAAATCCCCGGGGGGGTGAA.TGGCGCC..GCCAGGGGGGGGCCG.CC.C.C.CCCCTTTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGt < 2:4029008/101‑1 (MQ=255)
ttCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGc > 2:1795035/1‑101 (MQ=255)
tCATCTTGCCGAAAATATCCCGGGGGGGGAA.TGGCGCA..GCCAGAGGGGGGCGG.CC.C.C.CCC..CTCGCGGGGCGCCCCGACGCGGGCCCGAAACAGGCGGTGcc > 2:2356170/1‑101 (MQ=16)
cATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGccc < 2:358880/101‑1 (MQ=255)
aTCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGcccc > 2:3437060/1‑101 (MQ=255)
aTCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGcccc > 2:4121141/1‑101 (MQ=255)
cTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCtt < 1:1135972/101‑1 (MQ=255)
ttGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCAAGAGGGGGGAAG.AG.CAA.CCC..TTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCttt > 1:607164/1‑101 (MQ=38)
gCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGt < 1:4658713/101‑1 (MQ=255)
gCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGt > 2:230904/1‑101 (MQ=255)
cgaaaaaTATCGCGGGGGGTGAA.GGGCGCA..GCCAGGGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTc < 2:1688591/98‑1 (MQ=38)
cGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCa > 2:4600832/1‑101 (MQ=255)
gAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCAt < 1:3002827/101‑1 (MQ=255)
gAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCAt > 2:2895895/1‑101 (MQ=255)
aaaaTATCCCGGGGGGTGAA.TGGCGCA..GCCAGATGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCAtt < 2:1853448/101‑1 (MQ=255)
aaaaTATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCAtt > 1:9936/1‑101 (MQ=255)
aaaTATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGCCGTGCCCCTTTGTCATTc > 1:3641255/1‑101 (MQ=255)
aaTATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCt > 1:4276132/1‑101 (MQ=255)
atatCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTg > 1:2056425/1‑101 (MQ=255)
atCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTGTc > 2:1144011/1‑101 (MQ=255)
cccGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCCGCGACGCGCG.CCGCCACCGGTCGTGCCCCGTTGTCATTCTGTCGc > 2:4243977/1‑101 (MQ=38)
cccGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGc > 1:1764809/1‑101 (MQ=255)
ccGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCa < 1:2215507/101‑1 (MQ=255)
gggggTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAccc > 2:916540/1‑101 (MQ=255)
gggggTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAccc > 1:2543109/1‑101 (MQ=255)
ggggTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCa > 2:3721327/1‑101 (MQ=255)
gggTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCAt > 2:4208839/1‑101 (MQ=255)
gggTGAA.GGGCGCA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCAt < 1:382215/101‑1 (MQ=255)
ggTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATg > 1:3321197/1‑101 (MQ=255)
gTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGt < 1:4294995/101‑1 (MQ=255)
gTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGt > 1:1820113/1‑101 (MQ=255)
tGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTc > 2:1388287/1‑101 (MQ=255)
gAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCa > 1:2440840/1‑101 (MQ=255)
aa.TGGCGCA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCAt < 2:2042507/101‑1 (MQ=255)
aagggCGCT..GCCAGGGGGGGGCAGCCC.C.C.CCC..TGCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCTCCCATGTCAt < 1:4102709/98‑1 (MQ=255)
tGGCGCA..GCCAGAGGGGGGCAGCCC.C.C.CCC..GTCGCGGGCGGCCACGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATaa < 1:310059/101‑1 (MQ=255)
tGGCGCA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATaa > 1:1448251/1‑101 (MQ=255)
cgcG..GCCGGAGGGGGGCAGCCC.C.C.CCC..TTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCt < 1:4136294/101‑1 (MQ=255)
gcA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTg > 1:685165/1‑101 (MQ=255)
cA..GCCAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTgg < 2:4157753/101‑1 (MQ=255)
gCCAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGcc > 2:4331004/1‑101 (MQ=255)
cAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGc > 1:1917808/1‑101 (MQ=255)
cAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGc > 1:3520520/1‑101 (MQ=255)
cAGAGGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGc < 1:1315111/101‑1 (MQ=255)
agagGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCa > 2:260490/1‑101 (MQ=255)
gagGGGGGCAG.CGCC.C.CCC..TTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCAt < 1:2151801/101‑1 (MQ=255)
|
TGCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG.C.C.CCC..TTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCAT > NC_014034/2249279‑2249478
Base quality scores:
ATCG
< 3 ≤
ATCG
< 17 ≤
ATCG
< 24 ≤
ATCG
< 33 ≤
ATCG
< 39 ≤
ATCG
|