| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,209,679 | 1 bp→GG | 100% | intergenic (+11/‑260) | cobO → / → cobQ1 | cob(I)yrinic acid a,c‑diamide adenosyltransferase/cobyric acid synthase CobQ |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,209,678 | 1 | .→G | 100.0% | 189.3 | 191 | intergenic (+10/‑261) | cobO/cobQ1 | cob(I)yrinic acid a,c‑diamide adenosyltransferase/cobyric acid synthase CobQ |
| Reads supporting (aligned to +/- strand): new base (34/103): ref base (32/22): total (66/125) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.64e-05 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 5.15e-01 | ||||||||||
| * | NC_014034 | 2,209,679 | 0 | C→G | 100.0% | 141.7 | 191 | intergenic (+11/‑260) | cobO/cobQ1 | cob(I)yrinic acid a,c‑diamide adenosyltransferase/cobyric acid synthase CobQ |
| Reads supporting (aligned to +/- strand): new base (35/103): ref base (31/22): total (66/125) | ||||||||||
| Fisher's exact test strand distribution p-value = 3.34e-05 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 4.02e-01 | ||||||||||
Only 100 of 224 total aligned reads displayed.
ATCGAGGCGGCCGATCTAGTGACCGAGATGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAAG.GC.C..GGGCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGATGAAACAGAGCGTTA.GGGATTTGGTAACCATGATCGGGCAAGCTGGCAACACGGTACAGGGA > NC_014034/2209579‑2209780
||||
aTCGAGGCGGCCGATCTAGTGACCGAGATGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTC.AAG.GC.C..g < 2:2976908/101‑1 (MQ=255)
tCGAGGCGGCCGATCTAGTGACCGAGATGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTC.AAG.GC.C..gg < 1:1721291/101‑1 (MQ=255)
cGAGGCGGCCGATCTAGTGACCGAGATGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTC.AAG.GC.C..ggg > 2:2043604/1‑101 (MQ=255)
cGAGGCGGCCGATCTAGTGACCGAGATGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGGCGAGTTCTGATCTC.AAG.GC.C..ggg > 2:1223086/1‑101 (MQ=255)
gAGGCGGCCGATCTAGTGACCGAGATGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGG.CC.C..ggg > 1:2464606/1‑101 (MQ=255)
gAGGCGGCCGATCTAGTGACCGAGATGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTC.AAG.GC.C..gggg > 2:3860814/1‑100 (MQ=255)
gcggcCGATCTAGTGACCGAGATGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTC.AAG.GC.C..GGgggcg < 1:708803/101‑2 (MQ=255)
gcCGATCTAGTGACCGAGATGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTC.AAG.GC.C..gggggggctg > 1:4347419/1‑94 (MQ=255)
cGATCTAGTGACCGAGATGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGG.GC.G..gggggggtgcc > 2:1014250/1‑93 (MQ=255)
cGATCTAGTGACCGAGATGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTC.AAG.GC.C..GGgggcgctgcc > 2:2210080/1‑95 (MQ=255)
aTCTAGTGACCGAGATGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTC.AAG.GC.CGGGGGCGC.TGcccc < 2:308196/101‑1 (MQ=255)
tCTAGTGACCGAGATGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTC.AAG.GC.CGGGGGCGC.TGccccc < 2:3171728/101‑1 (MQ=255)
cTAGTGACCGAGATGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCg > 2:1556708/1‑101 (MQ=255)
cTAGTGACCGAGATGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCg > 1:3059756/1‑101 (MQ=255)
aGTGACCGAGATGGGTCAGGTGAAGCACCCGTTCCGGGCAGGAATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGa > 2:2751182/1‑101 (MQ=255)
gTGACCGAGATGGGTCAGGTGGAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGAc > 1:3492233/1‑101 (MQ=255)
gTGACCGAGATGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTC.AAG.GC.CGGGGGCGC.TGCCCCCGGAc < 1:1784342/101‑1 (MQ=255)
tGACCGAGATGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGAcc < 2:1433237/101‑1 (MQ=255)
tGACCGAGATGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTC.AAG.GC.CGGGGGCGC.TGCCCCCGGAcc < 1:3761196/101‑1 (MQ=255)
gagaTGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGGGC.TGCCCCCGGGCCCCC.gg > 1:259208/1‑101 (MQ=255)
agaTGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGCCCCCC.ggg > 1:3634938/1‑101 (MQ=255)
agaTGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGACCCCC.ggg > 2:4688471/1‑101 (MQ=38)
agaTGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGACCCCC.ggg > 2:492609/1‑101 (MQ=38)
aTGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGACCCCC.GGGat < 1:452731/101‑1 (MQ=38)
aTGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGACCCCC.GGGat < 2:511975/101‑1 (MQ=38)
tGGGTCAGGTGAAGCTCCCGTTCCGGGCAGGCATCAAGGGCCAGCGGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGACCCCC.GGGata < 2:580643/101‑1 (MQ=37)
tGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGACCCCC.GGGata < 2:2386380/101‑1 (MQ=38)
tGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGACCCCC.GGGata > 2:618590/1‑101 (MQ=38)
tGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGACCCCC.GGGata < 1:1556809/101‑1 (MQ=38)
ggTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGACCCCC.GGGATAtt < 2:4165022/101‑1 (MQ=38)
gTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGACCCCC.GGGATAttt < 1:1876435/101‑1 (MQ=38)
gTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGc < 2:3428055/101‑1 (MQ=37)
tGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCa < 1:1263577/101‑1 (MQ=37)
tGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCa < 1:3861056/101‑1 (MQ=37)
gAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCaa < 2:3789469/101‑1 (MQ=37)
aaGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAg < 2:3233985/101‑1 (MQ=25)
aaGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAg < 1:4435736/101‑1 (MQ=25)
gCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGAt < 1:4664629/101‑1 (MQ=25)
cACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGATg < 2:3577425/101‑1 (MQ=25)
cACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGATg < 1:338441/101‑1 (MQ=25)
aCCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGATGa < 1:2299928/101‑1 (MQ=25)
cccGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGATGaa < 1:2894247/101‑1 (MQ=25)
ccGTTCCGGGCAGGCATCAAGGGCCGGCCGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGATGaaa < 2:4667721/101‑1 (MQ=21)
ccGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGATGaaa < 1:1293813/101‑1 (MQ=25)
cGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGATGAAAc < 1:4548538/101‑1 (MQ=25)
cGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGATGAAAc < 1:9275/101‑1 (MQ=25)
gTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGGGC.TGCCCCCGGACCCCC.GGGGTATTTGTGGCAAGATGAAACa > 2:4540640/1‑101 (MQ=25)
gTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGATGAAACa < 1:4266995/101‑1 (MQ=25)
gTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGATGAAACa < 2:2255125/101‑1 (MQ=25)
ttCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGATGAAACag < 1:428511/101‑1 (MQ=25)
ttCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCCGACCCCC.GGGGTATTTGTGGCAAGATGAAACag > 1:374121/1‑101 (MQ=21)
ccGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGGGC.TGCCCCCGGACCCCC.GGGGGATTTGTGGGAAGGTGAAAAagag > 2:2568044/1‑101 (MQ=25)
ccGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGATGAAACagag < 2:1119204/101‑1 (MQ=25)
cGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGATGAAACAGAGc < 1:2011310/101‑1 (MQ=25)
gggCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGATGAAACAGAGCg < 1:1014329/101‑1 (MQ=25)
gggCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGG.CC.CGGGGGGGG.GGCCCCCGGCCCCCCGGGGATTTTTG.GGCAAGAGGAAA.AGAGCg > 2:3360349/1‑101 (MQ=255)
gcaggcaTCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGATGAAACAGAGCGtt < 1:3420198/101‑1 (MQ=25)
caggcaTCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGATGAAACAGAGCGTTa < 2:3640509/101‑1 (MQ=25)
aggcaTCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGATGAAACAGAGCGTTA.g < 1:2977766/101‑1 (MQ=25)
aggcaTCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGATGAAACAGAGCGTTA.g < 2:710388/101‑1 (MQ=25)
ggcaTCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGATGAAACAGAGCGTTA.gg < 1:1494121/101‑1 (MQ=25)
gcaTCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGATGAAACAGAGCGTTA.ggg < 2:731328/101‑1 (MQ=25)
tCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGATGAAACAGAGCGTTA.GGGAtt < 1:577311/101‑1 (MQ=25)
tCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGATGAAACAGAGCGGTA.GGGAtt > 1:639935/1‑101 (MQ=21)
cAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGATGAAACAGAGCGTTA.GGGAttt < 1:1188005/101‑1 (MQ=25)
cAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGATGAAACAGAGCGTTA.GGGAttt < 2:2602739/101‑1 (MQ=25)
gggCCAGCCGGGGGTCGAGTTCTGATCTC.AAG.GC.CGGGGGCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGATGAAACAGAGCGTTA.GGGATTTGGt > 1:1405385/1‑101 (MQ=25)
gcAGCCGGGGCTCGAGCTCTGCTCTCAAGGCGG.G..GGGCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGATGAAACAGAGCGTTA.GGGATTTGGTAAc < 2:1692929/100‑1 (MQ=18)
ccAGCCGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGATGAAACAGAGCGTTA.GGGATTTGGTAAc < 2:2080013/101‑1 (MQ=25)
gCCGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGATGAAACAGAGCGTTA.GGGATTTGGTAACCAt < 1:4727510/101‑1 (MQ=25)
gCCGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGATGAAACAGAGCGTTA.GGGATTTGGTAACCAt < 1:810563/101‑1 (MQ=25)
gCCGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGATGAAACAGAGCGTTA.GGGATTTGGTAACCAt < 1:859020/101‑1 (MQ=25)
ccGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGATGAAACAGAGCGTTA.GGGATTTGGTAACCATg < 1:1818121/101‑1 (MQ=25)
ccGGGGGTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGATGAAACAGAGCGTTA.GGGATTTGGTAACCATg < 1:94465/101‑1 (MQ=25)
ccGGGGGTCGAGTTCTGATCTCAAGG.CC.CG.GGGGGCGGGCCCCCGGCCCCCCGGGGATTTTTGGGGC.GGA.GAAACCAAGCGGTAGGGGGTTTGGTAAcatg > 1:3452271/1‑98 (MQ=255)
gggggTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGATGAAACAGAGCGTTA.GGGATTTGGTAACCATGAt < 2:4053383/101‑1 (MQ=25)
ggggTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGATGAAACAGAGCGTTA.GGGATTTGGTAACCATGATc < 2:857420/101‑1 (MQ=25)
ggggTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGATGAAACAGAGCGTTA.GGGATTTGGTAACCATGATc < 2:1357310/101‑1 (MQ=25)
gggTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGACGCCC.GGGATATTTGTGGCAAGATGAAACAGAGCGTTA.GGGATTTGGTAACCATGATCg < 2:4249766/101‑1 (MQ=25)
gggTCGAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGATGAAACAGAGCGTTA.GGGATTTGGTAACCATGATCg < 2:1979531/101‑1 (MQ=25)
tCGAGTTCTGATCTC.AAG.GC.CGGGGGGGC.TGCCCCCGGGCCCCC.CGGGTATTTGTGGCAAGATGAAAAAGAGCGGTA.GGGATTTGGTAACCACTATCGGGc > 2:3616099/1‑101 (MQ=16)
cGAGTTCTGATCTC.AAG.GC.CGGGGGCGC.TGCCCCCCGACCCCC.GGGATATTTGTGGCAAGATGAAACAGAGCGTTA.GGGATTTGGTAACCATGATCGGGCa > 2:2736295/1‑101 (MQ=25)
gAGTTCTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGATGAAACAGAGCGTTA.GGGATTTGGTAACCATGATCGGGCaa < 1:1104832/101‑1 (MQ=25)
gAGTTCTGATCTC.AAG.GC.CGGGGGCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGATGAAACAGAGCGTTA.GGGGTTTGGTAACCATGATCGGGCaa > 2:3803572/1‑101 (MQ=25)
gTTCTGATCTCAAGG.CC.CG.GGGCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGATGAAACAGAGCGTTA.GGGATTTGGTAACCATGATCGGGCAAGc > 2:3748821/1‑101 (MQ=25)
cTGATCTCAAGG.CCGG..GGGCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGATGAAACAGAGCGTTA.GGGATTTGGTAACCATGATCGGGCAAGCTgg < 2:4372782/101‑1 (MQ=25)
tGATCTCAAGG.CC.GG.GGGCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGATGAAACAGAGCGTTA.GGGATTTGGTAACCATGATCGGGCAAGCTGGc > 1:2124863/1‑101 (MQ=25)
tcaaggccgggggCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGATGAAACAGAGCGTTA.GGGATTTGGTAACCATGATCGGGCAAGCTGGCAacac < 1:2145640/91‑1 (MQ=255)
tcaaggccgggggCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGATGAAAAAGAGCGTTA.GGGATTTGGTAACCATGATCGGGCAAGCTGGCAacac > 1:1480056/11‑101 (MQ=25)
caaggccgggggCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGATGAAACAGAGCGTTA.GGGATTTGGTAACCATGATCGGGCAAGCTGGCAACACg < 2:4424670/92‑1 (MQ=255)
aaggccgggggCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGATGAAACAGAGCGTTA.GGGATTTGGTAACCATGATCGGGCAAGCTGGCAACACgg < 1:2751346/93‑1 (MQ=255)
ggccgggggCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGATGAAACAGAGCGTTA.GGGATTTGGTAACCATGATCGGGCAAGCTGGCAACACGGTa < 1:492660/95‑1 (MQ=255)
gccgggggCGC.TGCCCCCGGACCCCC.GGGATATATGTGGCAAGATGAAACAGAGCGTTA.GGGATTTGGTAACCATGATCGGGCAAGCTGGCAACACGGTAc < 1:4069843/96‑1 (MQ=255)
ccgggggCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGATGAAACAGAGCGTTA.GGGATTTGGTAACCATGATCGGGCAAGCTGGCAACACGGTACa < 1:210867/97‑1 (MQ=255)
ccgggggCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGATGAAACAGAGCGTTA.GGGATTTGGTAACCATGATCGGGCAAGCTGGCAACACGGTACa < 2:4322366/97‑1 (MQ=255)
cgggggCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGATGAAACAGAGCGTTA.GGGATTTGGTAACCATGATCGGGCAAGCTGGCAACACGGTACag < 2:3543333/98‑1 (MQ=255)
gggggCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGATGAAACAGAGCGTTA.GGGATTTGGTAACCATGATCGGGCAAGCTGGCAACACGGTACagg > 1:3894634/3‑101 (MQ=255)
aggggCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGATGAAACAGAGCGTTA.GGGATTTGGTAACCATGATCGGGCAAGCTGGCAACACGGTACagg > 2:1856483/3‑101 (MQ=255)
ggggCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGATGAAACAGAGCGTTA.TGGATTTGGTAACCATGATCGGGCAAGCTGGCAACACGGTACaggg < 1:3170161/100‑1 (MQ=255)
gggCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGATGAAACAGAGCGTTA.GGGATTTGGTAACCATGATCGGGCAAGCTGGCAACACGGTACaggga < 1:3090650/101‑1 (MQ=255)
||||
ATCGAGGCGGCCGATCTAGTGACCGAGATGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAAG.GC.C..GGGCGC.TGCCCCCGGACCCCC.GGGATATTTGTGGCAAGATGAAACAGAGCGTTA.GGGATTTGGTAACCATGATCGGGCAAGCTGGCAACACGGTACAGGGA > NC_014034/2209579‑2209780
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 29 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|