| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 774,619 | 2 bp→GG | 100% | intergenic (‑73/+46) | oppB1 ← / ← oppA1 | oligopeptide ABC transporter permease OppB/oligopeptide ABC transporter periplasmic oligopeptide‑binding protein OppA |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 774,619 | 0 | C→G | 100.0% | 11.1 | 3 | intergenic (‑73/+47) | oppB1/oppA1 | oligopeptide ABC transporter permease OppB/oligopeptide ABC transporter periplasmic oligopeptide‑binding protein OppA |
| Reads supporting (aligned to +/- strand): new base (3/0): ref base (0/0): total (3/0) | ||||||||||
| * | NC_014034 | 774,620 | 0 | T→G | 100.0% | 11.1 | 3 | intergenic (‑74/+46) | oppB1/oppA1 | oligopeptide ABC transporter permease OppB/oligopeptide ABC transporter periplasmic oligopeptide‑binding protein OppA |
| Reads supporting (aligned to +/- strand): new base (3/0): ref base (0/0): total (3/0) | ||||||||||
CCGCAGCGCCCCCCCCCCCCTGGGGAACCGGCCCTGCCGGT.CGA.CGTACGGTCTCTTATCCTGCGATCACTTCGCCCGCGACCAGTCGGCCACGTTCCAGTATTC > NC_014034/774600‑774704
||
gcccggcgcCCCCCCGCCCGGGTCGGACCGGCCCTGCCGGTCCGACCCTACGGTCTCTTATCCTGCGATCACTTCGCCCGCGACCAGTCGGCCACGTTCCa > 1:585880/6‑101 (MQ=255)
cggcgcCCCCCCGCCCGGGTCGGACCGGCCCCGCCGGTCCGACCCTACGGTCTCTTATCCTGCGATCACTTCGCCCGCGACCCGTCGGCCACGTTCCAGTa > 2:4697769/3‑101 (MQ=255)
cgcCCCCCCGCCCGGGTCGGACCGGCCCTGCCGGTCCGACCCTACGGTCTCTTATCCTGCCATCACTTCGCCCGCGACCAGTCAGCCACGTTCCAGTATTc > 2:4263997/1‑101 (MQ=255)
||
CCGCAGCGCCCCCCCCCCCCTGGGGAACCGGCCCTGCCGGT.CGA.CGTACGGTCTCTTATCCTGCGATCACTTCGCCCGCGACCAGTCGGCCACGTTCCAGTATTC > NC_014034/774600‑774704
Base quality scores:
ATCG
< 3 ≤
ATCG
< 10 ≤
ATCG
< 17 ≤
ATCG
< 25 ≤
ATCG
< 39 ≤
ATCG
|