| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,395,795 | Δ1 bp | 2.9% | intergenic (+607/‑324) | RCAP_rcc01306 → / → RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,395,795 | 0 | C→. | 2.9% | 14.8 ‑0.7 0.0 | 271 | intergenic (+607/‑324) | RCAP_rcc01306/RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (3/5): ref base (135/128): total (138/133) | ||||||||||
| Fisher's exact test strand distribution p-value = 4.94e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.00e+00 | ||||||||||
Only 100 of 317 total aligned reads displayed.
CGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGC > NC_014034/1395695‑1395895
|
tggTCGCCCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT..GACCAGATCCGCAATCGG..CCGGGCTCGA.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc < 2:1387470/99‑1 (MQ=2)
ggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT..GACCAGATCCGCAATCGG..CCGGGCTCGA.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcc > 2:3711699/2‑101 (MQ=2)
ggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT..GACCAGATCCGCAATCGG..CCGGGCTCGA.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcc < 1:1258730/100‑1 (MQ=2)
aGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAG.GACATC..GCCGATCTGGGTAAGGCCG.G..TGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc < 1:955020/101‑1 (MQ=2)
gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTgc > 1:1314846/1‑101 (MQ=255)
gTCGCTCCCCCCGCGGGGGAGTGGATCGAAACT.GGTATG.GATCTG..GCGTAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTgc < 1:2830236/101‑1 (MQ=255)
gTCGCCCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAG.GACATC..GCCGATCTGGGTAAGGCCG.G..TGGTCGCTCCCCCCGCGGGGGCGTGGATCGAGAca < 1:1896147/101‑2 (MQ=2)
tCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAG.GACATC..GCCGATCTGGGTAAGGCCG.G..TGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcac < 1:2535894/101‑3 (MQ=2)
gcGCTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.ATGACCAAAT..CCGCAATCGG..CCGGGCT.GGATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCta < 1:4264405/100‑2 (MQ=2)
cGCTCCCCCCGCGGGGGTGTGGATCGAAACT.TG.AT..GACCAGATCCGCAATCGG..CCGGGCTCGA.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCtat < 2:4539446/101‑3 (MQ=2)
cGCTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT..GACCAGATCCGCAATCGG..CCGGGCTCGA.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCtat < 2:4289950/101‑3 (MQ=2)
cGCTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT..GACCAGATCCGCAATCGG..CCGGGCTCGA.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCtat < 1:4949381/101‑3 (MQ=2)
cGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGGCT.G..TCCTCGCTCCCCCCGCGGGGGCGGGGCTCGAAAGCTgtg.g > 2:4184789/1‑101 (MQ=25)
gCTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT..GACCAGATCCGCAATCGG..CCGGGCTCGA.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCtatg < 1:155601/101‑4 (MQ=2)
gCTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT..GACCAGATCCGCAATCGG..CCGGGCTCGA.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCtatg < 2:5007659/101‑4 (MQ=2)
gCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTgcg.gc < 1:1744697/101‑1 (MQ=255)
gCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTgcg.gc < 1:618059/101‑1 (MQ=255)
ccccccccGGGGGGGCGTGGATCGAAACTCGGCAAG.GACATC..GCCGATCTGGGTAAGGCCG.G..TGGTCGCCCCCCCCGCGGGGGCGTGGATCGAAAcacccg < 1:2651617/99‑6 (MQ=2)
cTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAG.GACATC..GCCGATCTGGGTAAGGCCG.G..TGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcacccg > 2:2897307/1‑96 (MQ=2)
cTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT..GACCAGATCCGCAATCGG..CCGGGCTCGA.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCtatga < 1:4987852/101‑5 (MQ=2)
cTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTgcg.gcg > 1:2267527/1‑101 (MQ=255)
tCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT..GACCAGATCCGCAATCGG..CCGGGCTCGA.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCtatgag > 1:2439499/1‑96 (MQ=2)
tCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTgcg.gcgg > 2:1599849/1‑100 (MQ=255)
cccccccGCGGGGGCGTGGATCGAAACTCGGCAAG.GACATC..GCCGATCTGGGTAAGGCCG.G..TGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcacccgg < 2:2086059/100‑7 (MQ=0)
ccccccGCGGGGGCGTGGATCGAAACTCGGCAAG.GACATC..GCCGATCTGGGTAAGGCCG.G..TGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcacccggc < 2:4338879/101‑8 (MQ=0)
ccccccGCGGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTg > 1:84409/1‑101 (MQ=255)
ccccccGCGGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTg < 2:4576296/101‑1 (MQ=255)
ccccccGCGGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTg > 1:3330049/1‑101 (MQ=255)
ccccccGCGGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGGGGATCGAAACCTGCG.GCGTg > 1:2194961/1‑101 (MQ=255)
cccccGCGGGGGCGTGGATCGAAACTCGGCAAG.GACATC..GCCGATCTGGGTAAGGCCG.G..TGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcacccggcg > 2:3771739/1‑93 (MQ=2)
cccGCGGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGGCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGt < 1:4623008/101‑1 (MQ=255)
gcgGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGc < 2:3127920/101‑1 (MQ=255)
cgGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGcc < 1:2679592/101‑1 (MQ=255)
gggggCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCa > 1:2319675/1‑101 (MQ=255)
ggggCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAg > 2:1964466/1‑101 (MQ=255)
gCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGa < 2:2694452/101‑1 (MQ=255)
cGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGAt < 1:4326667/101‑1 (MQ=255)
gTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATa > 2:2752649/1‑101 (MQ=255)
tGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTTCG.GCGTGAGTTGCCAGTGATAg < 2:3948830/101‑1 (MQ=255)
gggATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCT.CCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGa < 1:3491890/100‑1 (MQ=255)
gATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGACAGA.c < 2:4273559/101‑1 (MQ=255)
aTCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.Cg < 1:444478/101‑1 (MQ=255)
aTCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.Cg > 1:2985520/1‑101 (MQ=255)
cGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGcc < 1:2080246/101‑1 (MQ=255)
aaaCT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGt > 2:3326507/1‑101 (MQ=255)
aCT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTgg > 1:1677645/1‑101 (MQ=255)
cT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGa > 2:2219080/1‑101 (MQ=255)
t.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.c < 1:3282583/101‑1 (MQ=255)
gTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGt < 2:3621307/101‑1 (MQ=255)
tATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTc > 1:3443522/1‑101 (MQ=255)
aTG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCg < 2:2016822/101‑1 (MQ=255)
g.gATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCt > 1:3807805/1‑101 (MQ=255)
g.gATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTCATAGA.CGCCGTGGA.CGTCGCt > 2:3399631/1‑101 (MQ=255)
aTCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTcc > 2:2225371/1‑101 (MQ=255)
tG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTccccc < 2:3862515/101‑1 (MQ=255)
g..gCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTcccccc < 1:3050235/101‑1 (MQ=255)
g..gCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTcccccc > 2:4673375/1‑101 (MQ=255)
cAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCgg > 1:4738905/1‑101 (MQ=255)
aaCGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTAAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCgggg < 1:4029958/101‑1 (MQ=255)
cGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGc > 1:1614343/1‑101 (MQ=255)
cGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGc < 1:1008604/101‑1 (MQ=255)
g..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGt < 2:4889613/101‑1 (MQ=255)
aaaGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTg > 2:4363281/1‑101 (MQ=255)
aaaGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTg < 1:2752851/101‑1 (MQ=255)
ggacccgcccgtcgCTCCCCCCGCGGGGGCGTGGATCGAAA.CTGCGTGCGCGCCATG.AATTCATCGAGCGCCATCGAGCGTCGCTCCCCCCGCGGGGGCgg > 2:4559378/10‑100 (MQ=0)
ggacccgcccgtcgCTCCCCCCGCGGGGGCGTGGATCGAAA.CTGCGTGCGCGCCATG.AATTCATCGAGCGCCATCGAGCGTCGCTCCCCCCGCGGGGGCGt < 2:3042928/92‑1 (MQ=0)
gTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTgggt > 1:4543037/1‑99 (MQ=255)
tCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATc > 2:647316/1‑101 (MQ=255)
cT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGGGGATCg > 2:2495121/1‑101 (MQ=255)
cT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCg > 2:72287/1‑101 (MQ=255)
g..tcgtcGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGaa > 2:21099/1‑101 (MQ=255)
tcgtcgCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa < 2:4783071/101‑1 (MQ=255)
cgtcgCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc > 2:4473048/1‑101 (MQ=255)
gtcgCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACt > 2:1176397/1‑101 (MQ=255)
gtcgCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACt > 2:4961735/1‑101 (MQ=255)
gtcgCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACt < 1:386729/101‑1 (MQ=255)
gtcgCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCACTGAAAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGGGGATCGAAACt > 2:2331364/1‑101 (MQ=255)
tcgCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTg < 1:5038160/101‑1 (MQ=255)
cgCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTGGCTCCCCCCGCGGGGGCGTGGATCGAAACAgc > 2:1535704/1‑101 (MQ=255)
gCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTgcg > 2:1627830/1‑101 (MQ=255)
gCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGGGGGTCGAAACTgcg > 1:3413641/1‑101 (MQ=255)
cTCCCCCCGCGGGGGCGTGGATCGAAA.CTGCGTGCGCGCCATG.AATTCATCGAGCGCCATCGAGCGTCGCTCCCCCCCCGGGGGCGTGGAtgggaccacca > 1:1381833/1‑91 (MQ=0)
tCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGcgcc > 2:893033/1‑101 (MQ=255)
ccccccGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGcgccg < 1:2026801/101‑1 (MQ=255)
gcgGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATc < 1:291210/101‑1 (MQ=255)
gcgGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATc < 2:2426807/101‑1 (MQ=255)
cgGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCg < 1:273357/101‑1 (MQ=255)
cgGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCg < 2:352847/101‑1 (MQ=255)
cgGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCg < 1:1080232/101‑1 (MQ=255)
gggggCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGc > 1:4153293/1‑101 (MQ=255)
gggggCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGc > 1:4826520/1‑101 (MQ=255)
ggggCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCa > 1:3685927/1‑101 (MQ=255)
ggggCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCa > 2:2291396/1‑101 (MQ=255)
ggCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATc > 1:1840181/1‑101 (MQ=255)
gCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATcc < 1:1144161/101‑1 (MQ=255)
gTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCgg > 1:2048233/1‑101 (MQ=255)
ggATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTc > 2:1814082/1‑101 (MQ=255)
gATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCg < 1:362210/101‑1 (MQ=255)
tCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAg < 2:4036782/101‑1 (MQ=255)
cGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAgc > 1:3131049/1‑101 (MQ=255)
|
CGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATG.GATCTG..GCGCAAACGG..AAAGTCT.G..TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGC > NC_014034/1395695‑1395895
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|