| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,000,990 | +C | 1.9% | intergenic (+34/+89) | bhbA → / ← bfr | methylmalonyl‑CoA mutase/bacterioferritin |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,000,990 | 1 | .→C | 1.9% | 2.2 ‑3.3 ‑0.2 | 159 | intergenic (+34/+89) | bhbA/bfr | methylmalonyl‑CoA mutase/bacterioferritin |
| Reads supporting (aligned to +/- strand): new base (3/0): ref base (51/105): total (54/105) | ||||||||||
| Fisher's exact test strand distribution p-value = 3.77e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 6.92e-01 | ||||||||||
Only 100 of 214 total aligned reads displayed.
GCCGGGCACCAACATTCCGGCGGCGGCGCGCGAGATCCTGGATCTGATCCGC.GCGGCGCGGGGCTG.ACACGGGGCAGCTGACACGGGGCAGGGGGGCGC.TG.CCCCCCG.CCTTTGG..CCCCCCGGGATATTTTGGGCAAGATTACTGAAAAAGGCGCTCCGCGAGGGGCGCCTTTGACCTTTGTGCGGGGCTTATTCGGCCGC > NC_014034/1000890‑1001090
|
cgggcACCAACATTCCGGCGGCGGCGCGCGAGATCCTGGATCTGATCCGC.GCGGCGCGGGGCTG.ACACGGGGCAGCTGACACGGGGCAGGGGGGGGC.TG.cc > 1:971708/1‑101 (MQ=255)
gggcACCAACATTCCGGCGGCGGCGCGCGAGATCCTGGATCTGATCCGC.GCGGCGCGGGGCTG.ACACGGGGCAGCTGACACGGGGCAGGGGGGCGC.TG.ccc < 1:3385289/101‑1 (MQ=255)
gcACCAACATTCCGGCGGCGGCGCGCGAGATCCTGGATCTGATCCGC.GCGGCGCGGGGCTG.ACACGGGGCAGCTGACACGGGGCAGGGGGGCGC.TG.ccccc < 2:4605458/101‑1 (MQ=255)
cccAACATTCCGGCGGCGGCGCGCGAGATCCTGGATCTGATCCGC.GCGGCGCGGGGCTG.ACACGGGGCAGCTGACACGGGGCAGGGGGGCGC.TG.CCCCCCg < 2:1801932/100‑1 (MQ=255)
aCCAACATTCCGGCGGCGGCGCGCGAGATCCTGGATCTGATCCGC.GCGGCGCGGGGCTG.ACACGGGGCAGCTGACACGGGGCAGGGGGGGGC.TG.ccccccc > 1:2183791/1‑100 (MQ=255)
ccAACATTCCGGCGGCGGCGCGCGAGATCCTGGATCTGATCCGC.GCGGCGCGGGGCTG.ACACGGGGCAGCTGACACGGGGCAGGGGGGCGC.TG.cccccccc > 1:3238059/1‑99 (MQ=255)
cAACATTCCGGCGGCGGCGCGCGAGATCCTGGATCTGATCCGC.GCGGCGCGGGGCTG.ACACGGGGCAGCTGACACGGGGCAGGGGGGCGG.TG.CCCCCCG.cc > 2:4868302/1‑101 (MQ=255)
cAACATTCCGGCGGCGGCGCGCGAGATCCTGGATCTGATCCGC.GCGGCGCGGGGCTG.ACACGGGGCAGCTGACACGGGGCAGGGGGGCGC.TG.CCCCCCG.cc < 1:715081/101‑1 (MQ=255)
aaCATTCCGGCGGCGGCGCGCGAGATCCTGGATCTGATCCGC.GCGGCGCGGGGCTG.ACACGGGGAAGATGACACGGGCGAGGGGGGCGC.CG.CCCCCCG.CCt > 2:640856/1‑101 (MQ=255)
aCATTCCGGGGGCGGCGCGCGAGATCCTGGATCTGATCCGC.GCGGCGGGGGGCTG.ACACGGGGCAGCTGACACGGGGCAGGGGGGCGC.TG.CCCCCCG.CCtt < 1:3653813/101‑1 (MQ=255)
cttccgggcggcggcGCGCGAGATCCTGGATCTGATCCGC.GCGGCGGGGGGCTG.ACAGGGGGCAGCTGACACGGGGCAGGGGGGCGC.TG.CCCCCCG.CCttt < 2:339076/95‑1 (MQ=255)
cATTCCGGCGGCGGCGCGCGAGATCCTGGATCTGATCCGC.GCGGCGCGGGGCTG.ACACGGGGCAGCTGACACGGGGCAGGGGGGCGC.TG.CCCCCCC.CCctt > 2:2547440/1‑101 (MQ=255)
cATTCCGGCGGCGGCGCGCGAGATCCTGGATCTGATCCGC.GCGGCGCGGGGCTG.ACACGGGGCAGCTGACACGGGGCAGGGGGGCGC.TG.CCCCACG.CCttt < 1:1648358/101‑1 (MQ=255)
ctcccGGCGGCGGCGCGCGAGATCCTGGATCTGATCCGC.GCGGCGCGGGGCTG.ACACGGGGCAGCTGACACGGGGCAGGGGGGCGC.TG.CCCCCCG.CCTTTg < 2:4941600/98‑1 (MQ=255)
atcccGGCGGCGGCGCGCGAGATCCTGGATCTGATCCGC.GCGGCGCGGGGCTG.ACACGGGGCAGCTGACACGGGGCAGGGGGGCGC.TG.CCCCCCG.CCTTTg < 1:4849812/98‑1 (MQ=255)
ccGGCGGCGGCGCGCGAGATCCTGGATCTGATCCGC.GCGGCGCGGGGCTG.ACACGGGGCAGCTGACACGGGGCAGGGGGGCGC.TG.CCCCCCG.CCCTTGG..cc > 2:1506277/1‑101 (MQ=255)
ccGGCGGCGGCGCGCGAGATCCTGGATCTGATCCGC.GCGGCGCGGGGCTG.ACACGGGGCAGCTGACACGGGGCAGGGGGGCGC.TG.CCACCCG.CCCTTgggc > 2:484662/1‑99 (MQ=255)
ggcggcggcGCGCGAGATCCTGGATCTGATCCGC.GCGGCGCGGGGCTG.ACACGGGGCAGCTGACACGGGGCAGGGGGGGGG.GG.CCCCCCC.CCCCTCG..cccc > 1:1052216/1‑101 (MQ=255)
ggcggcggcGCGCGAGATCCTGGATCTGATCCGC.GCGGCGCGGGGCTG.ACACGGGGCAGCTGACACGGGGCAGGGGGGCGC.TG.CCCCCCG.CCTTTGG..cccc < 1:2476166/101‑1 (MQ=255)
ggcggcggcGCGCGAGATCCTGGATCTGATCCGC.GCGGCGCGGGGCTG.ACACGGGGCAGCTGACACGGGGCAGGGGGGCGC.TG.CCCCCCG.CCTTTGG..cccc > 2:1451992/1‑101 (MQ=255)
ggcggcggcGCGCGAGATCCTGGATCTGATCCGC.GCGGCGCGGGGCTG.ACACGGGGCAGCTGACACGGGGCAGGGGGGCGC.TG.CCCCCCG.CCTTTGG..cccc < 2:660499/101‑1 (MQ=255)
ggcggcggcGCGCGAGATCCTGGATCTGATCCGC.GCGGCGCGGGGCTG.ACACGGGGCAGCTGACACGGGGCAGGGGGGCGC.TG.CCCCCCG.CCCTTGG..gccc > 2:2381594/1‑101 (MQ=255)
ggcagcggcGCGCGAGATCCTGGATCTGATCCGC.GCGGCGCGGGGCTG.ACACGGGGCAGCTGACACGGGGCAGGGGGGCGC.TG.CCCCCCG.CCCTTGG..cccc > 1:5015431/1‑101 (MQ=255)
gcggcggcgCGCGAGATCCTGGATCTGATCCGC.GCGGCGCGGGGCTG.ACACGGGGCAGCTGACACGGGGCAGGGGGGGGC.TG.CCCCCCG.CCCTTGG..ccccc > 2:380273/1‑101 (MQ=255)
gagggggcgCGCGAGATCCTGGATCTGACCCGC.GCGGCGCGCGACTG.ACACGGGGCAGCTGACCCGGGGCAGGGGGGCGC.TG.CCCCCCG.CCTTTGG..ccccc < 2:4996736/96‑1 (MQ=255)
ggcggcgCGCGAGATCCTGGATCTGATCCGC.GCGGCGCGGGGCTG.ACACGGGGCAGCTGACACGGGGCAGGGGGGCGC.TG.CCCCCCG.CCTTTGG..CCCCCCg > 1:3129391/1‑101 (MQ=255)
ggcggcgCGCGAGATCCTGGATCTGATCCGC.GCGGCGCGGGGCTG.ACACGGGGCAGCTGACACGGGGCAGGGGGGCGC.TG.CCCCCCG.CCTTTGG..CCCCCCg > 2:580240/1‑101 (MQ=255)
ggcggcgCGCGAGATCCTGGATCTGATCCGC.GCGGCGCGGGGCTG.ACACGGGGCAGCTGACACGGGGCAGGGGGGCGC.TG.CCCCCCG.CCTTTGG..CCCCCCg < 1:4008688/101‑1 (MQ=255)
ggcgcgAGATCCTGGATCTGATCCGC.GGGGCGCGGGGCTG.ACACGGGGCAGCTCACACGGGGCAGGGGGGCGC.TG.CCCCCCG.CCTTTGG..CCCCCCGGGata < 2:4370000/100‑1 (MQ=255)
gggcgAGGTCGTGGATCTGAGCCGC.GGGGCG.GGGGCTGAACACGGGGCAGCTGAAACGGGGCTGGGGGGGGC.TG.CCCCCCG.CCTTTGG..CCCCCCGGGatat < 2:2233339/99‑1 (MQ=255)
cgcgAGATCCTGGATCTGATCCGC.GCGGCGCGGGGCTG.ACACGGGGCAGCTGACACGGGGCAGGGGGGCGC.TG.CCCCCCG.CCTTTGG..CCCCCCGGGATAtt < 1:4695250/101‑1 (MQ=255)
gggagaTCCTGGATCTGACCCGC.GCGGGGGGGGGCTG.ACACGGGGCAGCTGACACGGGGCAGGGGGGCGC.TG.CCCCCCG.CCTTTGG..CCCCCCGGGATAttt < 1:1329789/99‑1 (MQ=255)
gcgAGATCGTGGATCTGATCCGC.GCGGCGCGGGGCTG.ACACGGGGCAGCTGACACGGGGCAGGGGGGCGC.TG.CCCCCCG.CCTTTGG..CCCCCCGGGATAttt < 2:129450/101‑1 (MQ=255)
gcgAGAGCTTGGAT.TGGTCCCCGGCGGCGTGGGACTG.ACACGGGGAAGCGGCCACGGGGCGGGGGGGCAC.TT.CCCCCCG.CCTTTGG..CCCCCCGGGATAttt < 2:2822863/101‑1 (MQ=255)
cgAGATCCTGGATCTGATCCGC.GCGGCGCGGGGCTG.ACACGGGGCAGCTGACACGGGGTAGGGGGGCAC.CG.TCCCCCC.CCCTTTG..TGCCCCGGGACAtttt > 2:1983874/1‑101 (MQ=255)
cgAGATCCTGGATCTGATCCGC.GCGGCGCGGGGCTG.ACACGGGGCAGCTGACACGGGGCAGGGGGGGGCGGG.CCCCCCC.CCCTTGT..CCCCCCgcggccttt > 2:15469/1‑93 (MQ=255)
cgAGAGCCTGGATCTGACCCGC.GCGGCGCGGGGCTG.ACACGGGGCAGCTGACACGGGGCAGGGGGGCGC.TG.CCCCCCG.CCTTTGG..CCCCCCGGGATAtttt < 1:4675976/101‑1 (MQ=255)
agaTCCTGGATCTGACCCGC.GGGGCGGGGGGCTG.ACACGGGGCAGCTGACACGGGGCAGGGGGGCGC.TG.CCCCCCG.CCTTTGG..CCCCCCGGGATATTTTgg < 2:1718161/101‑1 (MQ=255)
aTCCTGGATCGGATCCGC.GCGGCGGGGGGCTG.ACACGGGGCAGCTGACACGGGGCGGGGGGGCGC.TG.CCCCCCG.CCTTTGG..CCCCCCGGGATATTTTGGGc < 1:1887239/101‑1 (MQ=255)
cTGGATCTGATCCGC.GCGGCGCGGGGCTG.ACACGGGGCAGCTGACACGGGGCAGGGGGGCGC.TG.CCCCCCG.CCTTTGG..CCCCCCGGGATATTTTGGGCAAg > 2:2474230/1‑101 (MQ=255)
cTGGATCTGACCCGC.GCGGCGGGGGGCTG.ACACGGGGCAGCTGACACGGGGCAGGGGGGCGC.TG.CCCCCCG.CCTTTGG..CCCCCCGGGATATTTTGGGCAAg < 1:2722195/101‑1 (MQ=255)
tGGATCTGATCCGC.GCGGCGGGGGGCTG.ACACGGGGCAGCTGACACGGGGCAGGGGGGCGC.TG.CCCCCCG.CCTTTGG..CCCCCCGGGATATTTTGGGCAAGa < 1:669956/101‑1 (MQ=255)
tGGATCTGATCCGC.GCGGCGCGGGGCTG.ACACGGGGCAGCTGACACGGGGCAGGGGGGCGC.TG.CCCCCCG.CCTTTGG..CCCCCCGGGATATTTTGGGCAAGa < 2:1688848/101‑1 (MQ=255)
ggATCTGATCCGC.GCGGCGCGGGGCTG.ACACGGGGCAGCTGACACGGGGCAGGGGGGGGC.GG.CCCCCCGCCCCTCGGC.CCCCCCGGGATTTTTTgtgaagt > 2:3643206/1‑95 (MQ=255)
gATCTGATCCGC.GGGGCGGGGGGCTG.CCCGGGGGCGGCGGACAGGGGGCAGGGGGGGGC.TG.CCCCCCG.CCTTTGG..CCCCCCGGGATATTTTGGGCAAGAtt < 1:3659196/101‑1 (MQ=255)
gATCGGACCCGC.GCGGGGCGGGGCTG.ACACGGGGCGGCTGACACGGGGCAGGGGGGCGC.GG.CCCCCCG.CCTTTGG..CCCCCCGGGATATTTTGGGCAAGAtt < 1:1487307/101‑1 (MQ=255)
aTCTGACCCGC.GGGGGGGGGGGCTG.ACACGGGGCAGCTGACACGGGGCAGGGGGGCGC.TG.CCCCCCG.CCTTTGG..CCCCCCGGGATATTTTGGGCAAGATTa < 1:204995/101‑1 (MQ=38)
tCTGATCCGC.GCGGCGCGGGGCTG.ACACGGGGCAGCTGACACGGGGCAGGGGGGCGC.TG.CCCCCCG.CCTTTGG..CCCCCCGGGATATTTTGGGCAAGATTAc > 1:2154747/1‑101 (MQ=255)
cTGATCCGC.GCGGCGCGGTGCTG.ACTCGGGCCAGCTGACGCGGGGCGGGGGGGCGC.TG.CCCCCCG.CCTTTGG..CCCCCCGGGATATTTTGGGCAAGATTACt < 2:305118/101‑1 (MQ=38)
tGATCCGC.GCGGCGCGGGGCTG.ACACGGGGCAGCTGACACGGGGCAGGGGGGGGC.GG.CCCCCCC.CCCTCTG..CCCCCCCGGGTGTTTTTGGGGAGATTAATg > 1:2612770/1‑101 (MQ=255)
tGATCCGC.GCGGCGCGGGGCTG.ACACGGGGCAGCTGACAAGGGGCAGGGGGGCGC.TG.CCCCCCG.CCTTTGG..CCCCCCGGGCTATTTTGGGCAAGATTACTg > 2:5032853/1‑101 (MQ=255)
gATCCGC.GCGGCGCGGGGCTG.ACACGGGGCAGCTGACACGGGGCAGGGGGGGGCGGG.CCCCCCC.CCTTTGGC.CCCCCCGGGCTTTTTTGGGAAAGTtttta > 2:3459989/1‑98 (MQ=255)
gATCCGC.GCGGCGCGGGGCTG.ACACGGGGCAGCTGACACGGGGCAGGGGGGCGC.TG.CCCCCCG.CCTTTGG..CCCCCCGGGATATTTTGGGCAAGATTACTGa > 1:311884/1‑101 (MQ=255)
gATCCGC.GCGGCGCGGGGCTG.ACACGGGGCAGCTGACACGGGGCAGGGGGGCGC.TG.CCCCCCG.CCTTTGG..CCCCCCGGGATATTTTGGGCAAGATTACTGa > 1:658642/1‑101 (MQ=255)
gATCCGC.GCGGCGCGGGGCTG.ACACGGGGCAGCTGACACGGGGCAGGGGGGCGC.TG.CCCCCCG.CCCTTGG..CCCCCCCGGGTATTTTTGGCAAGATTACTGa > 2:1949846/1‑101 (MQ=39)
gtCCGC.GCGGCGCGGGGCTG.ACACGGGGCAGCTGACACGGGGCAGGGGGGCGC.TG.CCCCCCG.CCTTTGG..CCCCCCGGGATATTTTGGGCAAGATTACTGaa < 2:135467/100‑1 (MQ=255)
gcccGC.GGGGGGGGGGGCTG.ACGCGGGGCAGCTGACGGGGGGCAGGGGGGCGC.TG.CCCCCCG.CCTTTGG..CCCCCCGGGATATTTTGGGCAAGATTACTGaa < 1:2750880/99‑1 (MQ=38)
aTCCGC.GCGGCGCGGGGCTG.ACACGGGGCAGCTGACACGGGGCAGGGGGGCGC.TG.CCCCCCG.CCTTTTG..CCCCCCCGGATATTTTGGGCAAGATTACTGaa > 2:1579813/1‑101 (MQ=255)
aTCCGC.GCGGCGCGGGGCTG.ACACGGGGCAGCTGACACGGGGCAGGGGGGCGC.TG.CCCCCCG.CCTTTGG..CCCCCCGGGATATTTTGGGCAAGATTACTGaa > 2:3931638/1‑101 (MQ=255)
ccGC.GGGGGGCGGGGCTG.ACGCGGGGCAGCTGACACGGGGCAGGGGGGCGC.TG.CCCCCCG.CCTTTGG..CCCCCCGGGATATTTTGGGCAAGATTACTGaaaa < 1:1506407/101‑1 (MQ=255)
ccGC.GGGGGGCGGGGCTG.ACCCGGGGCGGCTGACACGGGGCAGGGGGGCGC.TG.CCCCCCG.CCTTTGG..CCCCCCGGGATATTTTGGGCAAGATTACTGaaaa < 1:1307723/101‑1 (MQ=39)
ccGC.GCGGCGCGGGGCGG.ACACGGGGCAGCTGACACGGGGCAGGGGGGCGC.TC.CCCCCCG.CCTTTGG..CCCCCCGGGATATTTTGGGCAAGATTACTGaaaa < 2:2203242/101‑1 (MQ=255)
cgc.gcgGCGCGGGGCTG.ACACGGGGCAGCGGACAGGGGGCAGGGGGGCGC.TG.CCCCCCG.CCTTTGG..CCCCCCGGGATATTTTGGGCAAGATTACTGaaaaa < 2:3057624/101‑1 (MQ=255)
gc.gcggcgcgGGGCTG.ACACGGGGCAGCTGACACGGGGCAGGGGGGCGC.TG.CCCCCCG.CCTTTGG..CCCCCCGGGATATTTTGGGCAAGATTACTGAAAAAg > 1:2336556/1‑101 (MQ=255)
cggcgcggGGCTG.ACACGGGGCAGCTGACACGGGGCAGGGGGGCGC.TG.CCCCCCG.CCTTTGG..CCCCCCGGGATATTTTGGGCAAGATTACTGAAAAAGgcg > 1:1584341/1‑101 (MQ=255)
ggggcggGGCTG.ACACGGGGCAGCTGACACGGGGCAGGGGGGCGC.TG.CCCCCCG.CCTTTGG..CCCCCCGGGATATTTTGGGCAAGATTACTGAAAAAGgcgc < 2:3729988/98‑1 (MQ=255)
gcggGGCTG.ACACGGGGCAGCTGACACGGGGCAGGGGGGCGC.TG.CCCCCCG.CCTTTGG..CCCCCCGGGATATTTTGGGCAAGATTACTGAAAAAGGCGCTcc < 2:2696104/101‑1 (MQ=255)
cggGGCTG.ACACGGGGCAGCTGACACGGGGCAGGGGGGGGC.GG.GCCCCCC.CCGCTGG..GCCCCCGGGGTATTTTGGGGGAGGTTTCTGaaaaaagggggccg > 1:2082455/1‑92 (MQ=255)
ggggCTG.ACACGGGGCAGCTGACACGGGGCAGGGGGGGGG.GGCCCCCCCC.CCTTTGG..CCCCCCGGG.GATTTTTGGGGAGAATAATGAAAAAAGAGCGCcgc > 1:1926887/1‑101 (MQ=255)
gggCTG.ACACGGGGCAGCTGACACGGGGCAGGGGGGCGC.TG.CCCCCCG.CCTTTGG..CCCCCCGGGATATTTTGGGCAAGATTACTGAAAAAGGCGCTCcgcg < 2:3502074/101‑1 (MQ=255)
gctg.acacggggcagctgacacggggcaGGGGGGCGC.TG.CCCCCCG.CCTTTGG..CCCCCCGGGATATTTTGGGCAAGATTACTGAAAAAGGCGCTCCGCGAg > 2:711804/1‑101 (MQ=255)
tg.acacggggcagctgacacggggcagGGGGGGGC.TGCCCCCCCC.CCTTTGG..CCCCCCGGG.TATTTTTGGGAAGATTACTGAAAAAGGCGCTCCGCGCggg > 2:1128740/1‑101 (MQ=255)
acacggggcagctgacacggggcagGGGGGCGC.TG.CCCCCCG.CCTTTGG..CCCCCCGGGATATTTTGGGCAAGATTACTGAAAAAGGCGCTCCGCGAGGGgc > 2:4689507/1‑101 (MQ=255)
ggggcagctgacagggggcagGGGGGCGC.TC.CCCCCCG.CCTTTGG..CCCCCCGGGATATTTTGGGCAAGATTACTGAAAAAGGCGCTCCGCGAGGGGCGCCt < 2:2653090/101‑1 (MQ=255)
ggggcagctgacacggggcagGGGGGGGG.GG.CCCCCCC.CCCCTCGCCCCCCCCGGGAT.TTTTGGGC.AGAATACATAAAAAAGAGAGCCGCGCgggggggcc > 1:2583962/1‑96 (MQ=255)
gggcagctgacacggggcagGGGGGCGC.TG.CCCCCCG.CCTTTGG..CCCCCCGGGATATTTTGGGCAAGATTACTGAAAAAGGCGCTCCGCGAGGGGCGCCtt < 1:1565626/101‑1 (MQ=255)
gggcagctgacacggggcagGGGGGCGC.TG.CCCCCCG.CCTTTGG..CCCCCCGGGATATTTTGGGCAAGATTACTGAAAAAGGCGCTCCGCGAGGGGCGCCtt > 1:3149139/1‑101 (MQ=255)
ggcagctgacaggggggggGGGGGCGC.TG.CCCCCCG.CCTTTGG..CCCCCCGGGATATTTTGGGCAAGATTACTGAAAAAGGCGCTCCGCGAGGGGCGCCttt < 2:1052106/101‑1 (MQ=255)
ggcagctgacagggggcggGGGGGCGC.TC.CCCCCCG.CCTTTGG..CCCCCCGGGATATTTTGGGCAAGATTACTGAAAAAGGCGCTCCGCGAGGGGCGCCttt < 1:3909843/101‑1 (MQ=255)
gccagtcgccacggggcggGGGGGCGC.TC.CCCCCCG.CCTTTGG..CCCCCCGGGATATTTTGGGCAAGATTACTGAAAAAGGCGCTCCGCGAGGGGCGCCttt < 2:2076169/92‑1 (MQ=255)
gcggcggacacggggcagGGGGGCGC.TG.CCCCCCG.CCTTTGG..CCCCCCGGGATATTTTGGGCAAGATTACTGAAAAAGGCGCTCCGCGAGGGGCGCCTTTg < 1:382910/95‑1 (MQ=255)
tgacacggggcagGGGGGCGC.TG.CCCCCCG.CCTTTGG..CCCCCCGGGATATTTTGGGCAAGATTACTGAAAAAGGCGCTCCGCGAGGGGCGCCTTTGACCtt < 1:3326790/101‑1 (MQ=255)
gacacggggcagGGGGGCGC.TG.CCCCCCG.CCTTTGG..CCCCCCGGGATATTTTGGGCAAGATTACTGAAAAAGGCGCTCCGCGAGGGGCGCCTTTGACCttt > 1:4788306/1‑101 (MQ=255)
acagggggcagGGGGGCGC.TC.CCCCCCG.CCTTTGG..CCCCCCGGGATATTTTGGGCAAGATTACTGAAAAAGGCGCTCCGCGAGGGGCGCCTTTGACCTTtg < 2:3237808/101‑1 (MQ=255)
acacggggcagGGGGGCGC.TG.CCCCCCG.CCTTTGG..CCCCCCGGGATATTTTGGGCAAGATTACTGAAAAAGGCGCTCCGCGAGGGGCGCCTTTGACCTTtg > 1:2836355/1‑101 (MQ=255)
ccggggcagGGGGGCGC.TC.CCCCCCG.CCTTTGG..CCCCCCGGGATATTTTGGGCAAGATTACTGAAAAAGGCGCTCCGCGAGGGGCGCCTTTGACCTTtgtg < 1:4898802/100‑1 (MQ=255)
acggggcagGGGGGCGC.TC.CCCCCCG.CCTTTGG..CCCCCCGGGATATTTTGGGCAAGATTACTGAAAAAGGCGCTCCGCGAGGGGCGCCTTTGACCTTtgtg < 1:4447749/101‑1 (MQ=255)
cggggcagGGGGGCGC.TG.CCCCCCG.CCTTTGG..CCCCCCGGGATATTTTGGGCAAGATTACTGAAAAAGGCGCTCCGCGGGGGGGGCCTTTGACCTTtgtgg > 2:3784750/1‑100 (MQ=255)
ggggcagGGGGGCGC.TG.CCCCCCG.CCTTTGG..CCCCCCGGGATATTTTGGGCAAGATTACTGAAAAAGGCGCTCCGCGAGGGGCGCCTTTGACCTTTGTGCg < 2:2901077/101‑1 (MQ=255)
agGGGGGCGC.TG.CCCCCCG.CCTTTGG..CCCCCCGGGATATTTTGGGCAAGATTACTGAAAAAGGCGCTCCGCGAGGGGCGCCTTTGACCTTTGTGCGGGGCt > 1:4596027/1‑101 (MQ=255)
ggggggCGC.TC.CCCCCCG.CCTTTGG..CCCCCCGGGATATTTTGGGCAAGATTACTGAAAAAGGCGCTCCGCGAGGGGCGCCTTTGACCTTTGTGCGGGGCtt < 2:489041/101‑1 (MQ=255)
ggggggCCC.CC.CCCCCCG.CCTTTGG..CCCCCCGGGATATTTTGGGCAAGATTACTGAAAAAGGCGCTCCGCGAGGGGCGCCTTTGACCTTTGTGCGGGGCtt < 1:3513783/101‑1 (MQ=255)
gggggCGC.CG.CCCCCCG.CCTTTGG..CCCCCCGGGATATTTTGGGCAAGATTACTGAAAAAGGCGCTCCGCGAGGGGCGCCTTTGACCTTTGTGCGGGGCTTa < 2:4191052/101‑1 (MQ=255)
ggggCGC.TC.CCCCCCG.CCTTTGG..CCCCCCGGGATATTTTGGGCAAGATTACTGAAAAAGGCGCTCCGCGAGGGGCGCCTTTGACCTTTGTGCGGGGCTTAt < 2:2014472/101‑1 (MQ=255)
gggCGC.TG.CCCCCCG.CCTTTGG..CCCCCCGGGATATTTTGGGCAAGATTACTGAAAAAGGCGCTCCGCGAGGGGCGCCTTTGACCTTTGTGCGGGGCTTAtt < 2:1076790/101‑1 (MQ=255)
ggCGC.TC.CCCCCCG.CCTTTGG..CCCCCCGGGATATTTTGGGCAAGATTACTGAAAAAGGCGCTCCGCGAGGGGCGCCTTTGACCTTTGTGCGGGGCTTATTc < 1:3643478/101‑1 (MQ=255)
cgc.TG.CCCCCCG.CCTTTGG..CCCCCCGGGATATTTTGGGCAAGATTACTGAAAAAGGCGCTCCGCGAGGGGCGCCTTTGACCTTTGTGCGGGGCTTATTCgg < 2:2506946/101‑1 (MQ=255)
gc.TG.CCCCCCG.CCTTTGG..CCCCCCGGGATATTTTGGGCAAGATTACTGAAAAAGGCGCTCCGCGAGGGGCGCCTTTGACCTTTGTGCGGGGCTTATTCGGc > 2:4153911/1‑101 (MQ=255)
gc.TG.CCCCCCG.CCTTTGG..CCCCCCGGGATATTTTGGGCAAGATTACTGAAAAAGGCGCTCCGCGAGGGGCGCCTTTGACCTTTGTGCGGGGCTTATTCGGc > 1:2963823/1‑101 (MQ=255)
tG.CCCCCCG.CCTTTGG..CCCCCCGGGATATTTTGGGCAAGATTACTGAAAAAGGCGCTCCGCGAGGGGCGCCTTTGACCTTTGTGCGGGGCTTATTCGGCcg < 2:517190/101‑1 (MQ=255)
|
GCCGGGCACCAACATTCCGGCGGCGGCGCGCGAGATCCTGGATCTGATCCGC.GCGGCGCGGGGCTG.ACACGGGGCAGCTGACACGGGGCAGGGGGGCGC.TG.CCCCCCG.CCTTTGG..CCCCCCGGGATATTTTGGGCAAGATTACTGAAAAAGGCGCTCCGCGAGGGGCGCCTTTGACCTTTGTGCGGGGCTTATTCGGCCGC > NC_014034/1000890‑1001090
Base quality scores:
ATCG
< 3 ≤
ATCG
< 8 ≤
ATCG
< 19 ≤
ATCG
< 31 ≤
ATCG
< 39 ≤
ATCG
|