Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_014034 2,165,863 +C 100% intergenic (‑168/‑216) RCAP_rcc02007 ← / → tig phage integrase/trigger factor

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0140342,165,8631.→C100.0% 750.1 197intergenic (‑168/‑216)RCAP_rcc02007/tigphage integrase/trigger factor
Reads supporting (aligned to +/- strand):  new base (106/90):  ref base (1/0):  total (107/90)

Only 100 of 219 total aligned reads displayed.

ATTACATCTTTGCGGCGTTGAGATTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTT.CTCTG..CCTG.CCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGAAAACGGCCCGGAAAA  >  NC_014034/2165764‑2165955
                                                                                                    |                                                                                               
aTTCCATCTTTGCGGCGTTGAGATTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTt.c                                                                                                <  2:2791849/101‑1 (MQ=255)
  tACATCTTTGCGGCGTTGAGATTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTt.cct                                                                                              <  1:2371960/101‑3 (MQ=255)
  tACATCTTTGCGGCGTTGAGATTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTt.cct                                                                                              >  1:1498611/1‑99 (MQ=255)
    cATCTTTGCGGCGTTGAGATTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTt.cctct                                                                                            <  2:2864824/101‑5 (MQ=255)
      tCTTTGCGGCGTTGAGATTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTctg..c                                                                                         <  2:3486902/101‑1 (MQ=255)
       cTTTGCGGCGTTGAGATTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTctg..cc                                                                                        >  1:4647941/1‑101 (MQ=255)
          tGCGGCGTTGAGATTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTctg..ccctg                                                                                     <  2:2713782/101‑4 (MQ=255)
           gcggcgTTGAGATTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTctg..ccctgc                                                                                    >  1:3416318/1‑97 (MQ=255)
            gggcgTTGAGATTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTctg..ccctgcc                                                                                   <  2:694455/100‑6 (MQ=255)
            cggcgTTGAGATTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTctg..ccctgcc                                                                                   <  2:3038704/101‑6 (MQ=255)
             ggcgTTGAGATTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTG.ccc                                                                                  <  1:493511/101‑1 (MQ=255)
              gcgTTGAGATTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTG.cccc                                                                                 >  1:3364602/1‑100 (MQ=255)
               cgTTGAGATTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTG.ccccg                                                                                <  2:182555/101‑3 (MQ=255)
                gTTGAGATTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTG.ccccgc                                                                               >  1:3172544/1‑98 (MQ=255)
                 ttGAGATTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTG.ccccgcg                                                                              >  2:2965718/1‑97 (MQ=255)
                  tGAGATTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTG.ccccgcgc                                                                             >  2:4341020/1‑96 (MQ=255)
                   gagaTTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCt                                                                             <  2:2414994/101‑1 (MQ=255)
                   gagaTTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCt                                                                             >  1:2071893/1‑101 (MQ=255)
                   gagaTTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCt                                                                             >  1:408464/1‑101 (MQ=255)
                   gagaTTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTG..CCCT.CCCccgccct                                                                           >  1:3778165/1‑98 (MQ=255)
                     gaTTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGc                                                                           >  1:2586188/1‑101 (MQ=255)
                      aTTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGcc                                                                          <  2:3641/101‑1 (MQ=255)
                         tCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGtc                                                                       >  2:743724/1‑101 (MQ=255)
                          cccGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGtct                                                                      >  2:1275812/1‑101 (MQ=255)
                           ccGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGtctc                                                                     >  2:4888037/1‑101 (MQ=255)
                            cGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCg                                                                    >  2:3949779/1‑101 (MQ=255)
                            cGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCg                                                                    <  1:595125/101‑1 (MQ=255)
                             ggggCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCgg                                                                   >  1:688799/1‑101 (MQ=255)
                              gggCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCggg                                                                  >  1:1668564/1‑101 (MQ=255)
                                 cgcAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCg                                                               >  1:3101543/1‑101 (MQ=255)
                                 cgcAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCg                                                               >  2:151524/1‑101 (MQ=255)
                                    agagTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCgtct                                                            <  1:443410/101‑1 (MQ=255)
                                       gTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCgtctgtc                                                         >  2:3865339/1‑101 (MQ=255)
                                       gTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCgtctgtc                                                         >  2:1877776/1‑101 (MQ=255)
                                        tCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCgtctgtct                                                        <  1:4454717/101‑1 (MQ=255)
                                         cAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGtctgtctg                                                       >  1:3940172/1‑101 (MQ=255)
                                           aCCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTggg                                                     <  2:2760036/101‑1 (MQ=255)
                                           aCCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTggg                                                     <  1:3079231/101‑1 (MQ=255)
                                            ccTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGc                                                    <  1:4276165/101‑1 (MQ=255)
                                             cTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCg                                                   >  2:2171671/1‑101 (MQ=255)
                                             cTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCg                                                   <  1:1943001/101‑1 (MQ=255)
                                             cTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCg                                                   <  2:3901590/101‑1 (MQ=255)
                                                 gaCGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATc                                               >  1:1904536/1‑101 (MQ=255)
                                                 gaCGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATc                                               <  2:2131084/101‑1 (MQ=255)
                                                  aCGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCt                                              <  2:1003987/101‑1 (MQ=255)
                                                    ggCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCttt                                            <  2:2071745/101‑1 (MQ=255)
                                                     gCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATAtttt                                           <  1:3865631/101‑1 (MQ=255)
                                                      cATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTc                                          >  2:218997/1‑101 (MQ=255)
                                                      cATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTc                                          <  2:1594312/101‑1 (MQ=255)
                                                       aTGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCg                                         <  1:2905496/101‑1 (MQ=255)
                                                        tGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGa                                        >  1:1956577/1‑101 (MQ=255)
                                                        tGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGa                                        >  2:892118/1‑101 (MQ=255)
                                                         gCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGAt                                       <  1:2481015/101‑1 (MQ=255)
                                                         gCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGAt                                       >  1:16586/1‑101 (MQ=255)
                                                         gCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGAt                                       <  1:2065964/101‑1 (MQ=255)
                                                          cAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATc                                      <  1:2817607/101‑1 (MQ=255)
                                                           aaCACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCt                                     <  2:4955013/101‑1 (MQ=255)
                                                             cacGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCttt                                   <  1:4010534/101‑1 (MQ=255)
                                                             cacGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCttt                                   <  2:3172293/101‑1 (MQ=255)
                                                             cacGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCttt                                   <  1:585750/101‑1 (MQ=255)
                                                               cGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCt                                 <  2:785230/101‑1 (MQ=255)
                                                               cGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCt                                 >  1:81279/1‑101 (MQ=255)
                                                                ggCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTg                                <  2:3676252/101‑1 (MQ=255)
                                                                ggCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTg                                <  2:3210412/101‑1 (MQ=255)
                                                                ggCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTg                                <  2:2586007/101‑1 (MQ=255)
                                                                ggCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTg                                <  1:3535939/101‑1 (MQ=255)
                                                                ggCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTg                                >  2:615581/1‑101 (MQ=255)
                                                                ggCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTg                                <  2:4510638/101‑1 (MQ=255)
                                                                ggCACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATATTTCTg                                >  2:1423185/1‑101 (MQ=255)
                                                                  cccgggTGCAGCCCCCCCGCACCATCTGCCCTTC.CCCCGCCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGcc                              <  2:1437159/97‑1 (MQ=255)
                                                                  cACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGcc                              >  1:1777250/1‑101 (MQ=255)
                                                                  cACTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGcc                              <  2:3101305/101‑1 (MQ=255)
                                                                    cTGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCcgc                            >  1:1211905/1‑101 (MQ=255)
                                                                     tGGTGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCcgcg                           >  1:4757189/1‑101 (MQ=255)
                                                                        tGCAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCg                        <  2:2230235/101‑1 (MQ=255)
                                                                          cAGACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCggg                      >  1:1304600/1‑101 (MQ=255)
                                                                            gACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGAc                    <  2:4132949/101‑1 (MQ=255)
                                                                            gACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGAc                    >  2:94039/1‑101 (MQ=255)
                                                                            gACCACCCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCAGGAc                    <  2:4271459/101‑1 (MQ=255)
                                                                             accaccCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGAcc                   <  1:200163/101‑1 (MQ=255)
                                                                             accaccCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGAcc                   >  1:3824011/1‑101 (MQ=255)
                                                                             accaccCGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGAcc                   <  2:3939880/101‑1 (MQ=255)
                                                                                ccccGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGaa                <  1:4876881/100‑1 (MQ=255)
                                                                                 cccGCACCATCTGGCCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGaaa               <  1:4341337/101‑1 (MQ=255)
                                                                                  ccGCACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGaaaa              >  1:2351279/1‑101 (MQ=255)
                                                                                     cACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGAAAACgg           >  1:77115/1‑101 (MQ=255)
                                                                                     cACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGAAAACgg           >  1:4191441/1‑101 (MQ=255)
                                                                                     cACCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGAAAACgg           >  2:3469250/1‑101 (MQ=255)
                                                                                      aCCATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGAAAACGGc          >  2:5044838/1‑101 (MQ=255)
                                                                                       ccATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGAAAACGGcc         >  1:1599100/1‑101 (MQ=255)
                                                                                        cATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGAAAACGGccc        >  2:167517/1‑101 (MQ=255)
                                                                                        cATCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGAAAACGGccc        <  1:751807/101‑1 (MQ=255)
                                                                                          tCTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGAAAACGGCCCgg      >  2:3439474/1‑101 (MQ=255)
                                                                                           cTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGAAAACGGCCCGGa     <  2:3379105/101‑1 (MQ=255)
                                                                                           cTGACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGAAAACGGCCCGGa     >  1:1370717/1‑101 (MQ=255)
                                                                                             gACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGAAAACGGCCCGGaaa   >  1:1120729/1‑101 (MQ=255)
                                                                                             gACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGAAAACGGCCCGGaaa   >  2:4799427/1‑101 (MQ=255)
                                                                                             gACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGAAAACGGCCCGGaaa   >  2:4719194/1‑101 (MQ=255)
                                                                                             gACCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGAAAACGGCCCCGaaa   >  1:1015961/1‑101 (MQ=255)
                                                                                              aCCTTTCCTCTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGAAAACGGCCCGGaaaa  >  2:3411750/1‑101 (MQ=255)
                                                                                                    |                                                                                               
ATTACATCTTTGCGGCGTTGAGATTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTT.CTCTG..CCTG.CCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGAAAACGGCCCGGAAAA  >  NC_014034/2165764‑2165955

Base quality scores:  ATCG  < 3 ≤  ATCG  < 24 ≤  ATCG  < 31 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG