| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,249,331 | +A | 2.1% | intergenic (‑127/‑178) | parE ← / → RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,249,331 | 2 | .→A | 2.1% | 11.6 ‑1.0 ‑0.7 | 236 | intergenic (‑127/‑178) | parE/RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Reads supporting (aligned to +/- strand): new base (4/1): ref base (124/107): total (128/108) | ||||||||||
| Fisher's exact test strand distribution p-value = 3.79e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.81e-01 | ||||||||||
Only 100 of 273 total aligned reads displayed.
GATGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCT.CTG.CCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.CCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAG > NC_014034/2249232‑2249428
|
aTGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCT.CTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...gggg..g < 1:4093201/101‑1 (MQ=255)
aTGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCT.CTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...gggg..g > 1:341858/1‑101 (MQ=255)
gCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCT.CTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGc < 2:4448752/101‑1 (MQ=255)
cacaGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCT.CTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCt < 1:1417376/101‑1 (MQ=255)
cacaGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCT.CTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCt < 2:1330604/101‑1 (MQ=255)
aGATACCGCAGCTTGGGCACCCGGGGCAAGNAGGGGGCT.CTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTc < 1:975538/101‑1 (MQ=255)
aGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCT.CTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTc > 2:1270258/1‑101 (MQ=255)
aGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCT.CTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTc < 1:3049482/101‑1 (MQ=255)
aGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCT.CTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTc < 1:3110599/101‑1 (MQ=255)
gATACCGCAGCTTGGGCNCCCGGGGCAAGAAGGGGGCT.CTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCa < 2:2347573/101‑1 (MQ=255)
gATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCT.CTGCCCC.CGTCCCGTGCCGGGACT.TCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCa < 2:2222766/101‑1 (MQ=255)
gATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCT.CTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCa < 2:613945/101‑1 (MQ=255)
aTACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCT.CTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCAt > 2:4133258/1‑101 (MQ=255)
aCCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCT.CTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCt > 2:4356992/1‑101 (MQ=255)
ccGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCT.CTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCtt < 1:1092739/101‑1 (MQ=255)
cGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCT.CTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTg < 2:3337026/101‑1 (MQ=255)
cGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCT.CTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTg > 1:4236661/1‑101 (MQ=255)
gCAGCTTGGGCACCCGGGGCAAGAAGGGGGCT.CTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGc > 1:3293908/1‑101 (MQ=255)
gCAGCTTGGGCACCCGGGGCAAGAAGGGGGCT.CTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGc < 1:3890979/101‑1 (MQ=255)
gCAGCTTGGGCACCCGGGGCAAGAAGGGGGCT.CTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGc > 1:3509049/1‑101 (MQ=255)
aGCTTGGGCACCCGGGGCAAGAAGGGGGCT.CTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCg < 2:1443510/101‑1 (MQ=255)
cTTGGGCACCCGGGGCAAGAAGGGGGCT.CTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGCTATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGaa > 1:1273009/1‑101 (MQ=255)
cTTGGGCACCCGGGGCAAGAAGGGGGCT.CTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGaa > 1:4147154/1‑101 (MQ=255)
ttGGGCACCCGGGGCAAGAAGGGGGCT.CTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGaaa > 1:3827198/1‑101 (MQ=255)
tGGGCACCCGGGGCAAGAAGGGGGCT.CTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGGTTTCATCTTGCCGaaaa > 2:4819187/1‑101 (MQ=255)
tGGGCACCCGGGGCAAGAAGGGGGCT.CTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGaaaa < 2:4579861/101‑1 (MQ=255)
gggCACCCGGGGCAAGAAGGGGGCT.CTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAat > 1:3198249/1‑101 (MQ=255)
gggCACCCGGGGCAAGAAGGGGGCT.CTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAat < 2:322504/101‑1 (MQ=255)
aCCCGGGGCAAGAAGGGGGCT.CTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATcc < 1:431164/101‑1 (MQ=255)
aCCCGGGGCAAGAAGGGGGCT.CTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATcc < 2:157007/101‑1 (MQ=255)
cccGGGGCAAGAAGGGGGCT.CTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATccc > 2:3515121/1‑101 (MQ=255)
cactcggCAAGAAGCGGGCT.CTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATacc > 2:3212936/6‑101 (MQ=37)
cGGGGCAAGAAGGGGGCT.CTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCgg > 1:1218484/1‑101 (MQ=255)
gggCAAGAAGGGGGCT.CTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCgggg > 2:4510651/1‑101 (MQ=255)
cAAGAAGGGGGCT.CTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGt < 2:4790983/101‑1 (MQ=255)
gagaagGGGGCTGCGC.CCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGTGTg < 2:1110866/100‑1 (MQ=38)
aagaagGGGGCT.CTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTg > 2:365312/1‑101 (MQ=255)
aagGGGGCT.CTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.t < 1:1933932/101‑1 (MQ=255)
aagGGGGCT.CTG.CCCACGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.t > 2:3903940/1‑101 (MQ=255)
agGGGGCT.CTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.Tg > 1:25854/1‑101 (MQ=255)
ggggCT.CTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGgc < 2:2188273/101‑1 (MQ=255)
gggCT.CTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGgcg < 2:4028024/101‑1 (MQ=255)
gggCT.CTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGgcg < 1:255547/101‑1 (MQ=255)
ct.ctGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..g < 1:4295982/101‑1 (MQ=255)
ct.ctGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..g < 1:1751733/101‑1 (MQ=255)
ctgcccc.cGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCNNNNNTATCCCGGGGGTTGAA.TCGCGCA..Gcc > 1:3250151/5‑101 (MQ=25)
ctgcccc.cGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..Gcc < 2:4878389/97‑1 (MQ=255)
gcccc.cGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCag > 1:3994163/3‑101 (MQ=255)
gcccc.cGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCag > 1:3177311/3‑101 (MQ=255)
gcccc.cGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGAAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATACCGGGGGGGGAA.GGGCGCA..GCCag > 1:2491384/3‑101 (MQ=38)
cccc.cGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCaga < 1:2904333/100‑1 (MQ=255)
cgtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAgggg > 1:2776911/1‑101 (MQ=255)
cgtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAACATCCCGGGGGGTGAA.TGGCGCA..GCCAGAgggg > 2:579604/1‑101 (MQ=255)
gtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAggggg > 1:4881073/1‑101 (MQ=255)
gtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGAGAA.TGGCGCA..GCCAGAggggg > 2:1813618/1‑101 (MQ=255)
tcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAgggggg < 1:392326/101‑1 (MQ=255)
cccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGc > 1:2415653/1‑101 (MQ=255)
cccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGc < 1:2111314/101‑1 (MQ=255)
cccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGc < 1:4980737/101‑1 (MQ=255)
cccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGCGAA.TGGCGCA..GCCAGAGGGGGGc > 2:2443535/1‑101 (MQ=255)
ccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCa > 2:3711690/1‑101 (MQ=255)
ccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GACAGAGGGGGGCa < 1:2728576/101‑1 (MQ=255)
cgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAg < 1:675225/101‑1 (MQ=255)
gtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAggggggagat > 2:2592967/1‑97 (MQ=255)
gtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAgc > 1:4454983/1‑101 (MQ=255)
gCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAgcg.c > 2:2661997/1‑101 (MQ=255)
gcggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAT..GCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAGGGGGGCAgc < 1:2286656/99‑1 (MQ=18)
gcggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAT..GCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAGGGGGGCAgc < 1:2459501/99‑1 (MQ=18)
cGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGGGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.ccc > 1:1052733/1‑101 (MQ=255)
ggACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGTCAGCG.ccccc < 1:4368513/101‑1 (MQ=255)
gACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.cccccc < 2:270951/101‑2 (MQ=255)
gACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.cccccc < 1:4752675/101‑2 (MQ=255)
aCT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.cccccct > 1:485248/1‑99 (MQ=255)
aCT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGGGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.cccccct > 1:2140057/1‑99 (MQ=255)
aCT.CCCCAGGGTTATTTGAGGCAAGATGTA...GGGG..GGCTTTCATCTTGGCGAAAATTTGCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.cccccct < 2:4101922/101‑3 (MQ=25)
t.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.ccccccttc < 2:1645830/101‑5 (MQ=255)
t.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.ccccccttc < 1:2181228/101‑5 (MQ=255)
t.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.ccccccttc > 1:4658426/1‑97 (MQ=255)
cccGGGATATTTGCGGCAAGATGAA...GGGGCATGATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAAAGGCCAAGAGGGGGCAGCG.CCCCC..tgc < 2:1204802/101‑3 (MQ=0)
gggATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCCCC..TTCgcgggc < 1:654632/101‑1 (MQ=255)
ggATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCCCC..TTCgcggggg > 1:3003233/1‑99 (MQ=255)
gATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCCCC..TTCgcgggcgg > 1:4569746/1‑101 (MQ=255)
atatTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTAAA.TGGCGCA..GACAGAGGGGGGCAGCGCCCCCC..TTCGCGggcggc > 2:901926/1‑101 (MQ=37)
atatTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGGGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCCCC..TTCGCGggcggc > 1:2251467/1‑101 (MQ=255)
atatTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGCGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCCCC..TTCGCGggcggc > 1:74012/1‑101 (MQ=255)
ttGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCCCC..TTCGCGGGCGGCcgcg > 2:535086/1‑101 (MQ=255)
ttGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCCCC..TTCGCGGGCGGCcgcg > 2:508930/1‑101 (MQ=255)
gATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.CCCCCA.TTCGCGGGCGGCCGCGACGCGcgcc > 2:225834/1‑101 (MQ=255)
gagga...GGGG..GGCTTTCATTTTGGCAAAAATGCCCCGGGGGGGTAA.TGGGGGC..GCCCGGGGGGGGGCGCC.CCCCCCTTTCGCGGGCGGCCGCGACGCGcgcc < 2:4236344/97‑1 (MQ=255)
tGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCCCC..TTCGCGGGCGGCCGCGACGCGcgccgc > 2:1777897/1‑101 (MQ=255)
gAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCa > 1:3437886/1‑101 (MQ=255)
gAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCa < 2:4682148/101‑1 (MQ=255)
aa...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCCCC..TTCGCGGGCGGCCGCGGCGCGCGCCGCaa > 2:1923001/1‑101 (MQ=255)
aa...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCaa > 2:1052694/1‑101 (MQ=255)
aa...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCaa > 1:2076968/1‑101 (MQ=255)
a...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAAc < 1:2855191/101‑1 (MQ=255)
a...GGGG..GGCTTTCATCTTGCCAAAAATGTCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAAc < 2:396183/101‑1 (MQ=37)
gggg..ggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACa < 1:365365/101‑1 (MQ=255)
gggg..ggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACa < 2:2897380/101‑1 (MQ=255)
gggg..ggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACa < 2:349745/101‑1 (MQ=255)
|
GATGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCT.CTG.CCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.CCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAG > NC_014034/2249232‑2249428
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|