| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,249,391 | +C | 94.1% | intergenic (‑187/‑118) | parE ← / → RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,249,391 | 1 | .→C | 94.1% | 28.1 0.0 ‑1.6 | 203 | intergenic (‑187/‑118) | parE/RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Reads supporting (aligned to +/- strand): new base (115/76): ref base (7/5): total (122/81) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.00e+00 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 2.43e-02 | ||||||||||
Only 100 of 244 total aligned reads displayed.
TGCCGGGACTCCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CG..CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATCGATGTCCGA > NC_014034/2249291‑2249488
|
tGCCTGGACTCCCCCGGGATATTTGAGGCAAGATCAG...GGGGGGTTTTCATCTT.TCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAg.cg < 1:2240441/101‑1 (MQ=37)
gCCGGGACTCCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAAGGGCGCAGCCAGAGGGGGGCAg.ag..c > 2:1737242/1‑101 (MQ=255)
gCCGGGACTCCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTAATCTT.GCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAg.cg..c > 2:2231113/1‑101 (MQ=255)
cGGGACTCCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTT.GCCGAAAATATCCCGGGGGGGGAATGGCGCAGCCAGAGGGGGGCAG.CG..ccc > 1:1052733/1‑101 (MQ=255)
gactccccccGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTT.GCCCGAAATATCCCGGGGGGTGAATGGCGAAGCCAGAGGGGGGCAG.CG..cc < 1:4232038/96‑1 (MQ=17)
gACTCCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CG..cccccc < 1:2807368/101‑2 (MQ=255)
aCTCCCCAGGGTTATTTGAGGCAAGATGTA...GGGGGGCTTTCATCTT.GGCGAAAATTTGCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CG..cccccct < 2:4101922/101‑3 (MQ=25)
cTCCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CG..cccccctt < 1:4041099/101‑4 (MQ=255)
gggATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCgcgggc < 1:654632/101‑1 (MQ=255)
ggATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCgcggggg > 1:3003233/1‑99 (MQ=255)
gATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCgcgggcgg > 1:4569746/1‑101 (MQ=255)
atatTTGAGGCAAGATGAA...GGGGGGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTAAATGGCGCAGACAGAGGGGGGCAG.CGC.CCCCC.TTCGCGggcggc > 2:901926/1‑101 (MQ=37)
atatTTGAGGCAAGATGAA...GGGGGGCTTTCATCTT.GCCGAAAATATCCCGGGGGGCGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGggcggc > 1:74012/1‑101 (MQ=255)
tatTTGAGGCAAGATGAA...GGGGGGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGcc < 2:2757136/101‑1 (MQ=255)
tttGAGGCAAGATGAA...GGGGGGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCcgc > 1:4305555/1‑101 (MQ=255)
tttGAGGCAAGATGAA...GGGGGGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCcgc < 2:4880746/101‑1 (MQ=255)
ttGAGGCAAGATGAA...GGGGGGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCcgcg > 2:1926736/1‑101 (MQ=255)
ttGAGGCAAGATGAA...GGGGGGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCcgcg > 1:4922108/1‑101 (MQ=255)
tGAGGCAAGATGAA...GGGGGGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGa < 1:3864265/101‑1 (MQ=255)
tGAGGCAAGATGAA...GGGGGGCTTTCATCTT.GCCGAAAATATCCCGGGGGGCGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGGGGGCGGCCGCGa > 1:477324/1‑101 (MQ=37)
aggtaggaggAA...GGGGGGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGAcg < 2:1582857/92‑1 (MQ=25)
aaGATGAA...GGGGGGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGAcgcgcg > 2:3936860/1‑101 (MQ=255)
aTGAA...GGGGGGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGcgccg > 1:2085237/1‑101 (MQ=255)
tGAA...GGGGGGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGcgccgc > 2:1777897/1‑101 (MQ=255)
gAA...GGGGGGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCa > 2:2673307/1‑101 (MQ=255)
gAA...GGGGGGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCa > 2:3637792/1‑101 (MQ=255)
gAA...GGGGGGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCa < 2:4682148/101‑1 (MQ=255)
gAA...GGGGGGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCa > 2:515019/1‑101 (MQ=255)
gAA...GGGGGGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCa < 2:540454/101‑1 (MQ=255)
ta...GGGGGGGCTTCATATTCCCCGAAAATAGCGTGGGGGGTAAACGGCGCAGCCAGGGGGGGGCGGCCC..CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCa < 1:3078535/100‑1 (MQ=255)
aa...GGGGGGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCGGCaa > 1:2565231/1‑101 (MQ=255)
aa...GGGGGGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCaa > 2:1052694/1‑101 (MQ=255)
aa...GGGGGGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCaa > 2:249070/1‑101 (MQ=255)
aa...GGGGGGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCaa > 1:1143316/1‑101 (MQ=255)
a...GGGGGGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAAc < 2:2403842/101‑1 (MQ=255)
a...GGGGGGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAAc > 2:1840746/1‑101 (MQ=255)
ggggggCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACa > 2:3529936/1‑101 (MQ=255)
ggggggCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACa < 1:2124760/101‑1 (MQ=255)
cTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGt < 2:3826913/101‑1 (MQ=255)
tttCATCTT.GCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTg > 1:2365250/1‑101 (MQ=255)
tttCATCTT.GCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTg < 2:1218367/101‑1 (MQ=255)
ttCATCTT.GCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGc < 2:4382807/101‑1 (MQ=255)
tCATCTT.GCCGAAAATATCCGGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGcc < 2:1296295/101‑1 (MQ=255)
tCATCTT.GCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGcc > 1:3201183/1‑101 (MQ=255)
aTCTT.GCCGAAAATATCCCGGGGGGTGAAGGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGcccc < 1:3981074/101‑1 (MQ=255)
tCTT.GCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCt < 1:2859550/101‑1 (MQ=255)
tCTT.GCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCt > 2:2699450/1‑101 (MQ=255)
cTT.GCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCtt < 2:3394470/101‑1 (MQ=255)
cTT.GCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCtt > 1:4349614/1‑101 (MQ=255)
ccGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTc < 2:4216837/101‑1 (MQ=255)
cGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCa > 1:2150742/1‑101 (MQ=255)
gAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCAt > 1:1794654/1‑101 (MQ=255)
aaaaTATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCAtt > 1:3784659/1‑101 (MQ=255)
aaaaTATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCAtt > 2:5019650/1‑101 (MQ=255)
aaaTATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTc < 2:308107/101‑1 (MQ=255)
aaaTATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTc > 1:4295762/1‑101 (MQ=255)
aaTTTCCGGGGGGGTGAATGGCGCAGCCAAAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGCGCCCCTTTGTTATTCt > 2:165061/1‑101 (MQ=37)
aaTGTCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAC.CGC.CCCCC.TTCGCTGCCGACCGCGACGCGCGCCCCACCTGGTCGTGCCCCTATGTCATTCt > 2:1642620/1‑101 (MQ=255)
tatCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGCCCCCCC.TTCGCGGGCGCCCGCACCCCCGGCCGCAAAAGGCCGGGCCCCTTGTTCTTTCtt > 2:588032/1‑100 (MQ=12)
atCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTc < 1:4945884/101‑1 (MQ=255)
atCCCGGGGGATGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTc > 2:432316/1‑101 (MQ=255)
gggggggTGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAc < 2:1009809/100‑1 (MQ=255)
cGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAc > 2:2894041/1‑101 (MQ=255)
gggggTGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCTCCccc > 2:3170935/1‑101 (MQ=38)
gggggTGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAccc > 2:1458945/1‑101 (MQ=255)
gggggTGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAccc < 2:3985285/101‑1 (MQ=255)
gggggTGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAccc > 1:702558/1‑101 (MQ=255)
gggTGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCAt > 2:2503832/1‑101 (MQ=255)
gggTGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCAt > 1:3478696/1‑101 (MQ=255)
gggTGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCAt > 2:4470104/1‑101 (MQ=255)
ggTGAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TGCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATg < 1:4829377/101‑1 (MQ=255)
ggAATGGCGCAGCCAGAGGGGGGCAGCCC..CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTc < 2:3478431/100‑1 (MQ=255)
gAATGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCa > 1:4527252/1‑101 (MQ=255)
aaTGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCAt < 2:2274322/101‑1 (MQ=255)
aaTGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGCCATTCTGTCGCACCCATGTCAt > 1:2320318/1‑101 (MQ=255)
aTGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATa > 1:1413744/1‑101 (MQ=255)
aTGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATa < 2:2427176/101‑1 (MQ=255)
tGGCGCAGCGGGGGGGGGGCGG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATaa < 1:579683/101‑1 (MQ=255)
tGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATaa > 2:2808364/1‑101 (MQ=255)
tGGCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATaa > 1:4413198/1‑101 (MQ=255)
ggCGCAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAg < 1:4976029/101‑1 (MQ=255)
gcAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTg < 1:2936855/101‑1 (MQ=255)
cAGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTgg > 2:3420182/1‑101 (MQ=255)
aGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGc > 2:4603970/1‑101 (MQ=255)
aGCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGc > 1:3435802/1‑101 (MQ=255)
cAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGc > 1:2070822/1‑101 (MQ=255)
cAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGc > 1:905595/1‑101 (MQ=255)
cAGAGGGGGCCGGCCC..CCCCC.TCCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGc < 2:2003903/101‑1 (MQ=255)
agagGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCa > 2:3004394/1‑101 (MQ=255)
gagGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCAt > 1:1576532/1‑101 (MQ=255)
ggggggTAG.CC..CCCCCGTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTTCCCCTTTGTCATTCTGTCGCGCCCATGTCATAAGCTGGCCGCATCg < 1:2014668/101‑1 (MQ=255)
ggggggCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATCg < 2:3993861/101‑1 (MQ=255)
ggggggCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATCg < 2:875741/101‑1 (MQ=255)
gggggCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATCGa < 1:363917/101‑1 (MQ=255)
gggCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATCGATg > 2:1152696/1‑101 (MQ=255)
gCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATCGATGTc < 2:3197998/101‑1 (MQ=255)
cAG.CGC.CCCCC.TTGGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATCGATGTcc < 2:1550676/101‑1 (MQ=255)
cAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATCGATGTcc > 1:4485527/1‑101 (MQ=255)
cAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATCGATGTcc > 2:4766799/1‑101 (MQ=255)
gcgg..cCCCC.TTCGCGGGCGTCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATCGATGTCCGa < 2:3808867/98‑1 (MQ=255)
|
TGCCGGGACTCCCCCGGGATATTTGAGGCAAGATGAA...GGGGGGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAATGGCGCAGCCAGAGGGGGGCAG.CG..CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATCGATGTCCGA > NC_014034/2249291‑2249488
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 25 ≤
ATCG
< 33 ≤
ATCG
< 39 ≤
ATCG
|