| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 3,532,987 | +G | 90.4% | intergenic (‑6/‑19) | RCAP_rcc03340 ← / → RCAP_rcc03341 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 3,532,987 | 1 | .→G | 90.4% | 48.0 ‑0.5 ‑0.2 | 177 | intergenic (‑6/‑19) | RCAP_rcc03340/RCAP_rcc03341 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (81/79): ref base (10/7): total (91/86) | ||||||||||
| Fisher's exact test strand distribution p-value = 6.14e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 6.60e-01 | ||||||||||
Only 100 of 192 total aligned reads displayed.
AGCGGGGAAAGCGGCGCCTGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTC.GGGGCGATCTGCGCCATCGCGGCGCAAAGCTGC..GG..CCC.GCCCTTCGATCCAGTGCAGCCAACCGTCCTCGACCGCAACCGTCGCCCCGCACAGAT.C.TGCGCGCCCGGCAGGGCCGCCAGATCGTG > NC_014034/3532888‑3533079
|
cGGGGAAAGCGGCGCCTGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGC..gg > 1:3351157/1‑101 (MQ=255)
cGGGGAAAGCGGCGCCTGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGACAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGC..gg > 2:1690463/1‑101 (MQ=255)
ggggAAAGCGGCGCCTGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGC..ggg > 1:4692923/1‑100 (MQ=255)
gggAAAGCGGCGCCTGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGC..gggc > 1:4007766/1‑99 (MQ=255)
ggAAAGCGGCGCCTGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGC..Gg..gcc > 2:4114233/1‑101 (MQ=255)
gAAAGCGGCGCCTGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGC..Gg..gccc > 1:2715027/1‑100 (MQ=255)
aaaGCGGCGCCTGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGC..Gg..gcccg > 1:3051248/1‑99 (MQ=255)
aggcgccgCCTGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGC..Gg..gcccgg < 1:922412/99‑4 (MQ=255)
gcggcgCCTGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGC..Gg..gcccggcc > 2:4151483/1‑96 (MQ=255)
cggcgCCTTTGGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGC..Gg..gcccggccc < 2:3793598/101‑7 (MQ=255)
gcgcCTGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGC..Gg..gcccggccctt < 2:4615267/101‑9 (MQ=255)
gcgcCTGTCGGGCCAGGCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGC..Gg..gcccggccctt < 2:4513341/101‑9 (MQ=255)
cgcCTGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCTGCGCAAAGCTGCG.GG..CCCGGCCCTTc < 2:1040016/101‑1 (MQ=255)
cgcCTGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTc < 2:2264553/101‑1 (MQ=255)
gcCTGTCGGTCCAGTCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCg > 2:4933677/1‑101 (MQ=255)
cggTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGGCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGAt < 1:1841458/99‑1 (MQ=255)
cTGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCCACGCGGCGCAAAGCTGCGGGG..CCG.GCCCTTCGAt > 1:4345315/1‑101 (MQ=255)
cTGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGC..GGGACCG.GCCCTTCGAt > 1:2659744/1‑101 (MQ=255)
tccgatctcAGCCGCCCGAAAGCAGCCGCCCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATc < 1:4565533/93‑1 (MQ=255)
tGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATc > 1:423892/1‑101 (MQ=255)
tGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATc > 1:3238209/1‑101 (MQ=255)
tGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATc > 1:5017413/1‑101 (MQ=255)
tGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCAACGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATc > 1:4337236/1‑101 (MQ=255)
ggccGGCCCAGCCGCCCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATc < 2:3774587/98‑1 (MQ=255)
gTCGGTCCAGCCGACCGAAAGGAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATcc > 1:2874872/1‑101 (MQ=255)
gTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATcc > 2:1821454/1‑101 (MQ=255)
cGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCNNTNCan > 1:2271438/1‑100 (MQ=255)
cGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAg > 1:965403/1‑101 (MQ=255)
ggTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCCCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGt < 1:1690592/101‑1 (MQ=255)
tCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGc > 1:2589875/1‑101 (MQ=255)
tCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGc > 1:2343208/1‑101 (MQ=255)
tCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGc > 2:2359757/1‑101 (MQ=255)
ccAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCa > 2:3632071/1‑101 (MQ=255)
ccAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCa > 2:900412/1‑101 (MQ=255)
cAGCCGACCGAAAGCAGCCGCCCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATcagatcgga > 2:4565212/1‑93 (MQ=255)
cAGCCAACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAg < 2:3546258/101‑1 (MQ=255)
aGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGc > 2:503061/1‑101 (MQ=255)
ccgaccgaAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCa < 1:3666900/101‑1 (MQ=255)
cgaccgaAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCag > 2:744223/1‑100 (MQ=255)
accgaAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGcc < 1:1825514/101‑1 (MQ=255)
ccgaAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCg < 2:4465588/101‑1 (MQ=255)
gaAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTc > 1:376592/1‑101 (MQ=255)
gaAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTc > 2:3199009/1‑101 (MQ=255)
gaAAGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTc > 2:4429324/1‑101 (MQ=255)
aaGCAGCCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCt < 1:1197165/101‑1 (MQ=255)
gcagcCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCg > 1:3628497/1‑101 (MQ=255)
gcCGCGCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGAcc < 2:1501634/101‑1 (MQ=255)
cgcgCCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGc > 1:2187261/1‑101 (MQ=255)
cgcCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCaa < 2:3237958/101‑1 (MQ=255)
gcCTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAAc < 2:3051010/101‑1 (MQ=255)
ccTCGGCCGGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCGGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAAcc < 1:3152373/101‑1 (MQ=255)
ccTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAAcc < 1:2950596/101‑1 (MQ=255)
ccTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAAcc < 1:4934007/101‑1 (MQ=255)
cTCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCg > 1:557251/1‑101 (MQ=255)
tCGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGt < 2:194692/101‑1 (MQ=255)
cGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTc < 2:2597509/101‑1 (MQ=255)
cGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTc > 2:4464553/1‑101 (MQ=255)
cGGCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTc > 1:1264933/1‑101 (MQ=255)
ggCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCg > 2:4360302/1‑101 (MQ=255)
gCCAGCCGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGc > 1:1114336/1‑101 (MQ=255)
cAGCGGGGGGTCGGGGGGGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGccc < 1:2175487/101‑1 (MQ=255)
ccGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGc > 2:3876299/1‑101 (MQ=255)
cGGGGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGca > 2:2387851/1‑101 (MQ=255)
ggggTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGcaca > 1:1389211/1‑101 (MQ=255)
gtcgggggCGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGAt > 1:2775472/5‑101 (MQ=255)
gtcgggggCGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGAt > 2:2128666/5‑101 (MQ=255)
cgggggCGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGAT.cc < 2:2822003/99‑2 (MQ=255)
cgggggCGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGAT.cc > 1:1513589/3‑100 (MQ=255)
cgggggCGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGAT.cc < 1:853552/99‑2 (MQ=255)
gggggCGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGAT.cct < 2:3428311/100‑3 (MQ=255)
gggggCGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGAT.cct > 1:1022906/2‑99 (MQ=255)
gggggCGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGAT.cct > 2:1863844/2‑99 (MQ=255)
ggggCGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGAT.cctg > 1:619439/1‑98 (MQ=255)
gggCGATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGAT.cctgc < 1:3334281/101‑5 (MQ=255)
gATCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGCTCC.Tgcgcgc > 2:1968118/1‑101 (MQ=255)
aTCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCC.TGCGCGcc > 1:3489170/1‑101 (MQ=255)
aTCTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCC.TGCGCGcc > 2:866277/1‑101 (MQ=255)
cTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCC.TGCGCGCCCg < 1:4402205/101‑1 (MQ=255)
cTGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCC.TGCGCGCCCg < 2:100792/101‑1 (MQ=255)
tGCGCCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCC.TGCGCGCCCgg < 2:5014079/101‑1 (MQ=255)
gcgcCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCC.TGCGCGCCCGGc > 2:398727/1‑101 (MQ=255)
gcgcCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCC.TGCGCGCCCGGc < 2:4091081/101‑1 (MQ=255)
gcCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCC.TGCGCGCCCGGCAg > 2:641132/1‑101 (MQ=255)
gcCATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCC.TGCGCGCCCGGCAg > 1:4838682/1‑101 (MQ=255)
ccATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCC.TGCGCGCCCGGCAgg < 1:1599472/101‑1 (MQ=255)
ccATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCC.TGCGCGCCCGGCAgg < 2:1275423/101‑1 (MQ=255)
cATCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCC.TGCGCGCCCGGCAggg < 2:4739429/101‑1 (MQ=255)
aTCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCC.TGCGCGCCCGGCAGGgc < 1:1780343/101‑1 (MQ=255)
aTCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCC.TGCGCGCCCGGCAGGgc < 2:1114222/101‑1 (MQ=255)
tCGCGGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCC.TGCGCGCCCGGCAGGgcc < 1:503327/101‑1 (MQ=255)
cgcgGCGCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCC.TGCGCGCCCGGCAGGgccg > 1:1550615/1‑101 (MQ=255)
ggcgCAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCC.TGCGCGCCCGGCAGGGCCGCCa > 2:2656067/1‑101 (MQ=255)
cgcAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCC.TGCGCGCCCGGCAGGGCCGCCAGa < 1:4114550/101‑1 (MQ=255)
gcAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCC.TGCGCGCCCGGCAGGGCCGCCAGAt > 1:4529683/1‑101 (MQ=255)
gcAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCC.TGCGCGCCCGGCAGGGCCGCCAGAt > 2:1152117/1‑101 (MQ=255)
cAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCC.TGCGCGCCCGGCAGGGCCGCCAGATc > 2:2293204/1‑101 (MQ=255)
cAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCC.TGCGCGCCCGGCAGGGCCGCCAGATc < 1:4151800/101‑1 (MQ=255)
cAAAGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGACGTCCTCGACCGCAACCGTCGCCCCGCACAGATCC.TGCGCGCCCGGCAGGGCCGCCAGATc > 1:2504378/1‑101 (MQ=255)
aaaGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAGATCC.TGCGCGCCCGGCAGGGCCGCCAGATCg < 2:1596420/101‑1 (MQ=255)
aaaGCTGCG.GG..CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGCCGCCCCGCCCAGAT.CATGCGCGCCCGGCAGGGCCGCCAGACCg > 1:3831924/1‑101 (MQ=255)
|
AGCGGGGAAAGCGGCGCCTGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGGGGGTC.GGGGCGATCTGCGCCATCGCGGCGCAAAGCTGC..GG..CCC.GCCCTTCGATCCAGTGCAGCCAACCGTCCTCGACCGCAACCGTCGCCCCGCACAGAT.C.TGCGCGCCCGGCAGGGCCGCCAGATCGTG > NC_014034/3532888‑3533079
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|