| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 580,930 | +C | 2.3% | intergenic (+51/‑320) | RCAP_rcc00541 → / → RCAP_rcc00542 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 580,930 | 1 | .→C | 2.3% | 4.9 ‑1.2 ‑1.4 | 176 | intergenic (+51/‑320) | RCAP_rcc00541/RCAP_rcc00542 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (0/4): ref base (54/118): total (54/122) | ||||||||||
| Fisher's exact test strand distribution p-value = 3.14e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 3.63e-02 | ||||||||||
Only 100 of 213 total aligned reads displayed.
CCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CA.CCCCCGGGATATTTGAGGCAAGAT.AACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCC > NC_014034/580830‑581029
|
tGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAAAT.CA.ccc > 2:2181754/1‑101 (MQ=255)
aTCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CA.ccccc < 1:3428387/101‑1 (MQ=255)
aTCCGGGGGCAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CA.ccccc < 2:3442988/101‑1 (MQ=255)
tCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGGGGTGCCCCCCCCTTTTGCGCGGC.CCG.AAATT.CC.ccccc > 1:2550763/1‑101 (MQ=255)
ccGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGTTG.CCCCCTCTTTCC.GCTGCGCCG.GAATT.TA.TCCCCgg > 2:455492/1‑101 (MQ=255)
ccGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CA.CCCCCgg < 2:37716/101‑1 (MQ=255)
cGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CA.CCCCCggg < 1:1987812/101‑1 (MQ=255)
gggggAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CA.CCCCCGGGat > 2:2127318/1‑101 (MQ=255)
gggAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CA.CCCCCGGGatat < 1:4700625/101‑1 (MQ=255)
gggAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CA.CCCCCGGGatat < 1:1481357/101‑1 (MQ=255)
ggAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CA.CCCCCGGGATAtt < 1:2168066/101‑1 (MQ=255)
ggAAACCGCGCGTGACAAGGTGTGCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CA.CCCCCGGGATAtt < 2:4157951/101‑1 (MQ=255)
aaaCCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CA.CCCCCGGGGTATTTg > 2:2911802/1‑101 (MQ=255)
aaaCCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CA.CCCCCGGGATATTTg < 2:51369/101‑1 (MQ=255)
aaaCCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CA.CCCCCGGGATATTTg < 1:1663621/101‑1 (MQ=255)
aaaCCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CA.CCCCCGGGATATTTg < 2:3685244/101‑1 (MQ=255)
aaaCCGAGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CA.CCCCCGGGATATTTg < 1:813723/101‑1 (MQ=255)
aaCCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CA.CCCCCGGGATATTTgg > 2:2833468/1‑100 (MQ=255)
aCCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CA.CCCCCGGGATATTTGAg < 1:224713/101‑1 (MQ=255)
ccGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CA.CCCCCGGGATATTTGAgg < 2:3990126/101‑1 (MQ=255)
gcgcgTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGGGCTG.CCCCCCCTTTTC.GCTTCGCCGCAAATTACC.CCCCCGGGATTTTTggga > 1:1758607/1‑98 (MQ=255)
gcgcgTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGCGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CA.CCCCCGGGATATTTGAGGCa < 1:4244393/101‑1 (MQ=255)
gcgTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CA.CCCCCGGGATATTTGAGGCAAg < 2:4726220/101‑1 (MQ=255)
cgTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CA.CCCCCGGGATATTTGAGGCAAGa < 1:4329401/101‑1 (MQ=255)
gTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CA.CCCCCGGGATATTTGAGGCAAGAt < 2:1351896/101‑1 (MQ=255)
gTGACAAGGTGTTACGCCTCGCTTGAGGCGGCCCGGGCCGGGGGCGCTG.CCCCCTCTTTCC.GCTGAGCCG.CCATT.CC.CACCAGGGCTATTTGAGGCAAGaa > 2:2415237/1‑100 (MQ=25)
gACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGGGGTG.CCCCCTCTTTTC.GCTGGGCCG.AAATT.CA.ACCCCCGGATATTTGAGGCAAGAtca > 2:4780502/1‑99 (MQ=255)
gACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CA.CCCCCGGGATATTTGAGGCAAGAT.aa < 2:1908191/101‑1 (MQ=255)
gACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CA.CCCCCGGGATATTTGAGGCAAGAT.aa < 1:1619701/101‑1 (MQ=255)
gACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CA.CCCCCGGGATATTTGAGGCAAGAT.aa < 1:1720600/101‑1 (MQ=255)
gACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.ACTGCGCTG.AAATT.CC.CCCCCGGGATATTTGAGGCAAGAT.aa < 2:1741225/101‑1 (MQ=255)
gACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCC.GCTGCGCCG.CAATT.CC.CCCCCGCGCTATTTGTGGCaaaacaa > 2:4917379/1‑96 (MQ=25)
aCAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CT.CCCCCGGGATATTTGAGGCAAGAT.aaa < 2:1299888/101‑2 (MQ=255)
aaGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCCG.CCCCCCCTTTCG.GCTGCGCCG.CAATT.CA.CCCCCGGGGGATTTGAGGCAAGAT.aaacg > 1:412851/1‑98 (MQ=38)
aGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CA.CCCCCGGGATATTTGAGGCAAGAT.aaacgg > 2:3236746/1‑97 (MQ=255)
ccGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGGTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTa < 1:4352044/101‑1 (MQ=255)
ccGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTa < 2:4426866/101‑1 (MQ=255)
ccGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTa < 2:1468936/101‑1 (MQ=255)
cGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAt < 2:2550067/101‑1 (MQ=255)
gCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATc < 1:4425145/101‑1 (MQ=255)
gCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATc < 1:4757738/101‑1 (MQ=255)
tCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CC.CCCCCCGGGTATTTGAGGCAAGATAAACGGGCGCCTATCAcc > 1:2407286/1‑101 (MQ=25)
ttGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTgg > 1:1531128/1‑101 (MQ=255)
tGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CC.CCCCCGGGATATTTGAGGCCAGATAAACGGGCGCCTATCACCTTGGt > 1:2129768/1‑101 (MQ=25)
aGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGc > 2:832280/1‑101 (MQ=255)
ggcggcCCGGGCAGGGGGCGCTG.CCCCCTCTTTTG.GCTGCGCCG.AAATT.TA.CCCCCGGGATATTTTAGGCAAGATAAACGGGCGCCTATCACCTTGGTGcc > 1:4812793/1‑100 (MQ=21)
ggcggcCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CA.CCCCCGGGAAGTTTGAGGCAAGATAAACGGGGGCCTATCACCTTGGTGCa > 2:3123552/1‑101 (MQ=25)
cggcCCGGGCAGGGGGCGCTG.CCCCCTCTTTTG.GCTGGGCCG.AAATT.TA.CCCCCGGGGTATTTTAGGCAAGATAAACAGGCGCCTATCACCTTGGGGCcaa > 1:59108/1‑101 (MQ=18)
cggcCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCaaa < 2:2475262/101‑1 (MQ=255)
cggcCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCaaa < 2:3736550/101‑1 (MQ=255)
ggcCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAat < 2:2709816/101‑1 (MQ=255)
gggCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCg < 2:2808298/101‑1 (MQ=255)
gggCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCg < 1:3578657/101‑1 (MQ=255)
gCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CA.CCCCCGGGATATTTGAGGCAAGATAAACGGGTGCCTATCACCTTGGTGCAAATATCCggg < 1:2980273/101‑1 (MQ=255)
gCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCggg < 1:5009701/101‑1 (MQ=255)
cAGGGGGCGCTG.CCCCCTCTTTTG.GCTGCGCCG.AAATT.CA.CCCCCCGGGTATTTGAGGCAAGATAAAAGGGGGCCCATCACCCTGGTGCCAATAACCgggg > 2:86290/1‑101 (MQ=17)
cAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCgggg > 2:4984320/1‑101 (MQ=255)
aGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCggggg > 1:4625452/1‑101 (MQ=255)
gggggCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCAGCTTGGTGCAAATATCCgggggg > 2:848348/1‑101 (MQ=255)
tccgatcTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGt < 1:3655851/95‑1 (MQ=25)
ggggCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CA.CCCCCGGGATATTTGAGGCAAGATAAACGGGGGCCTATCACCTTGGTGCAAATATCCggggggg > 2:77383/1‑100 (MQ=255)
ggggCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGt > 2:3038443/1‑101 (MQ=255)
ggCGCTG.CCCCCTCTTGCG.GCTGCGCCG.AAATT.CA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGa < 2:264896/101‑1 (MQ=255)
gcTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CA.CCCCCCGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGGGAggg > 2:3532231/1‑100 (MQ=38)
g.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGa < 1:1900393/101‑1 (MQ=255)
g.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGa < 1:732097/101‑1 (MQ=255)
g.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGGGAGGCCGa > 2:3620194/1‑101 (MQ=255)
g.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGGGAGGCCGa > 1:3194913/1‑101 (MQ=255)
g.CCCCCTCTTTCG.GCCGCGCCG.AAATT.CA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGa < 1:1199307/101‑1 (MQ=255)
g.CCCCCTCGTTCG.GGTGGGCCG.CAACT.CC.CCCCCGGGATATTTGAGGCCAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGa < 1:2517012/101‑1 (MQ=25)
ccccTCTTTCG.GCTGCGCCG.AAATT.CA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGaaa < 2:1063749/101‑1 (MQ=255)
ccccTCTTTCG.GCTGCGCCG.AAATT.CA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGaaa < 2:2863793/101‑1 (MQ=255)
tctTTCG.GCTGCGCCG.AAATT.CA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCg < 1:1774647/101‑1 (MQ=255)
ctTTCG.GCTGCGCCG.AAATT.CA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGa > 1:1032956/1‑101 (MQ=255)
ttCG.GCTGCGCCG.AAATT.CA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAgg > 2:3103399/1‑101 (MQ=255)
ttCG.GCTGCGCCG.AAATT.CA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAgg < 2:1766351/101‑1 (MQ=255)
g.gCTGCGCCG.AAATT.CA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAggggg > 1:2091462/1‑101 (MQ=255)
cTGCGCCG.AAATT.CA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCa > 1:4169521/1‑101 (MQ=255)
cTGCGCCG.AAATT.CA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCa < 1:3363887/101‑1 (MQ=255)
tGCGCCG.AAATT.CA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAg < 2:1873856/101‑1 (MQ=255)
gcgcCG.AAATT.CA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAgc < 1:4463664/101‑1 (MQ=255)
ttcggccaaTT.CACCCCCCGGGATATTTGCGGCAAGGTGAAAGGATGGGGTTTATCTTGCCCCAAATATCCCGGGGGTGAGG.CG.AAGCCGAGGGGGCAgcg < 2:205968/94‑1 (MQ=37)
ttcggccaaTT.CACCCCCCGGGATATTTGCGGCAAGGTGAAAGGATGGGGTTTATCTTGCCCCAAATATCCCGGGGGTGAGG.CG.AAGCCGAGGGGGCAgcg < 2:4002329/94‑1 (MQ=37)
cgcCG.AAATT.CA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAgcg < 2:3874545/101‑1 (MQ=255)
tcggccaaTT.CACCCCCCGGGATATTTGCGGCAAGGTGAAAGGATGGGGTTTATCTTGCCCCAAATATCCCGGGGGTGAGG.CG.AAGCCGAGGGGGCAgcgc < 1:1875534/95‑1 (MQ=37)
cG.AAATT.CA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGccc > 1:3876859/1‑101 (MQ=255)
g.AAATT.CA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATGCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGcccc > 1:3518019/1‑101 (MQ=255)
g.AAATT.CA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGcccc > 1:1952724/1‑101 (MQ=255)
aaaTT.CA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGccccc < 2:358100/101‑1 (MQ=255)
aaTT.CA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCt > 1:2842200/1‑101 (MQ=255)
aaTT.CA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCt < 1:518923/101‑1 (MQ=255)
aTT.CA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCtt < 2:1623281/101‑1 (MQ=255)
tt.CA.CCCCCGGGATATTTGAGGCAAGATAAACGAGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCttt < 2:2516032/101‑1 (MQ=255)
t.CA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCtttt > 2:295541/1‑101 (MQ=255)
t.CA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCtttt > 1:4764339/1‑101 (MQ=255)
t.CA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCtttt < 2:2378174/101‑1 (MQ=255)
t.CA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCttta > 1:851186/1‑100 (MQ=255)
cA.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTc > 1:2489010/1‑101 (MQ=255)
a.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTcc < 1:2428212/101‑1 (MQ=255)
a.CCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTcc > 2:1870794/1‑101 (MQ=255)
|
CCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTG.CCCCCTCTTTCG.GCTGCGCCG.AAATT.CA.CCCCCGGGATATTTGAGGCAAGAT.AACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCC > NC_014034/580830‑581029
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|