BRESEQ :: Evidence

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	1,396,950	1	.→T	9.3%	148.7 ‑3.2 ‑3.4	413	coding (832/1578 nt)	RCAP_rcc01307	hypothetical protein
Rejected: Prediction has significantly lower quality scores supporting polymorphism compared to reference.
Reads supporting (aligned to +/- strand): new base (13/25): ref base (195/179): total (208/205)
Fisher's exact test strand distribution p-value = 4.10e-02
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 3.92e-04

Only 100 of 452 total aligned reads displayed.


GGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTCCCCCCGCGGG  >  NC_014034/1396850‑1397050


 ggggCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GC.CT.GCGCG.GC.CGCA.t                                                                                                            <  1:4668657/101‑1 (MQ=255)


  gggCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GC.CT.GCGCG.GC.CGCA.Tc                                                                                                           <  2:1724295/101‑1 (MQ=255)


     cGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GC.CT.GCGCG.GC.CGCA.TCGGc                                                                                                        >  1:2307705/1‑101 (MQ=255)


       tGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GC.CT.GCGCG.GC.CGCA.TCGGCt.t                                                                                                     >  2:958840/1‑101 (MQ=255)


          aTCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCg                                                                                                  >  2:4124382/1‑101 (MQ=255)


            cGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGc.c                                                                                               >  1:4975406/1‑101 (MQ=255)


               aaCCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..G..c                                                                                        >  1:4145564/1‑101 (MQ=255)


               aaCCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..G..c                                                                                        <  1:2135722/101‑1 (MQ=255)


                aCCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..G..Cg                                                                                       >  2:1096149/1‑101 (MQ=255)


                  cGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..G..CGTg                                                                                     >  1:3662621/1‑101 (MQ=255)


                  cGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..G..CGTg                                                                                     <  2:3053645/101‑1 (MQ=255)


                      ccAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TGCGC.CC..G..CGTG.GTCg                                                                                >  2:2844613/1‑101 (MQ=255)


                      ccAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..G..CGTG.GTCg                                                                                >  2:2677452/1‑101 (MQ=255)


                        agagATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCt                                                                              >  2:4417943/1‑101 (MQ=255)


                            aTAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..C..CGTG.GGCGCTcccc                                                                          >  2:1226999/1‑101 (MQ=255)


                             tAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCCC.CT..G..CGTG.GTCGCTccccc                                                                         >  1:3955416/1‑101 (MQ=255)


                               gACCGCGCGGACCTCCTCAGACGTCGCTCCCGCCGCGGGGGCGTGGATCGAAACA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCcg                                                                       >  1:4485513/1‑101 (MQ=255)


                               gACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCcg                                                                       <  1:2897212/101‑1 (MQ=255)


                                    cgcgGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCgggg                                                                  <  1:1988471/101‑1 (MQ=255)


                                       ggACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCg                                                               >  2:2226839/1‑101 (MQ=255)


                                       ggACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCg                                                               >  2:1847137/1‑101 (MQ=255)


                                        gccctcctCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGTTCCCCCCGCGGGGGCGt                                                              <  1:1854325/99‑1 (MQ=255)


                                        gACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCCCGGGGGCgg                                                              >  2:2315217/1‑100 (MQ=255)


                                          cctcctCAGACGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACA.GC.CT.GCGCG.GC.CCCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTgg                                                            <  2:4993851/101‑1 (MQ=255)


                                           tcgcggttgcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGG.CTATGGCG.GC.AGTG.TCAGGT.T.TTC.CA..G..CGGC.GTCGCTCCCCCCGCGGGGGCGTgg                                                            <  2:1455824/92‑1 (MQ=0)


                                           tcgcggttgcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGG.CTATGGCG.GC.AGTG.TCAGGT.T.TTC.CA..G..CGGC.GTCGCTCCCCCCGCGGGGGCGTgg                                                            <  2:4033074/92‑1 (MQ=0)


                                            ttggccccggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA..A.CT.GACC...C.GGCA.ACGGCC.TATGCGCT..GGACGTG.GTCGCTCCCCCCGCGGGGGCGTGGAt                                                          >  1:4088813/10‑101 (MQ=2)


                                            tcctcAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCCCGGGGGCCTgggt                                                          >  1:4765541/1‑99 (MQ=255)


                                             tggccccggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA..A.CT.GACC...C.GGCA.ACGGCC.TATGCGCT..GGACGTG.GTCGCTCCCCCCGCGGGGGCGTGGATc                                                         <  1:3217404/93‑1 (MQ=2)


                                             tggccccggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA..A.CT.GACC...C.GGCA.ACGGCC.TATGCGCT..GGACGTG.GTCGCTCCCCCCGCGGGGGCGTGGATc                                                         >  1:1501469/9‑101 (MQ=2)


                                             gcggttgcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGG.CTATGGCG.GC.AGTG.TCAGGT.T.TTC.CA..G..CGGC.GTCGCTCCCCCCGCGGGGGCGTGGAt                                                          >  2:2637875/8‑101 (MQ=2)


                                             cctcAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATc                                                         <  1:936471/101‑1 (MQ=255)


                                             cctcAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATc                                                         <  1:579960/101‑1 (MQ=255)


                                              ctcAGACGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCATGGATCg                                                        <  2:3920075/101‑1 (MQ=255)


                                               tcAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGa                                                       <  2:1290338/101‑1 (MQ=255)


                                               ggttgcGTCGCGCCCCCCGCGGGGGCGTGGATCGAAACATGG.CTATGGCG.GC.AGTG.TCAGGT.T.TTC.CA..G..CGGC.GTCGCTCCCCCCGCGGGGGCGTGGATCg                                                        <  2:1666920/96‑1 (MQ=2)


                                               gccccggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA..A.CT.GACC...C.GGCA.ACGGCC.TATGCGCT..GGACGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGa                                                       >  2:3462617/7‑101 (MQ=2)


                                                cgcccggcGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GC.GT.GCGCG.CCATGAATTCATCG.AGCGC.CA..T..CGAGCGTCGCTCCCCCCGCGGGGGCGTGGATc                                                         <  2:4786259/94‑1 (MQ=2)


                                                cAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                                      >  1:2062391/1‑101 (MQ=255)


                                                   gcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGG.CTATGGCG.GC.AGTG.TCAGGT.T.TTC.CA..G..CGGC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc                                                    <  1:716399/100‑1 (MQ=2)


                                                   cggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA..A.CT.GACC...C.GGCA.ACGGCC.TATGCGCT..GGACGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAct                                                   <  2:4723137/99‑2 (MQ=2)


                                                   aCGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACa                                                   <  2:3589981/101‑1 (MQ=255)


                                                    cGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GC.GT.GCGCG.CCATGAATTCATCG.AGCGC.CA..T..CGAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                                     <  1:2838087/101‑1 (MQ=2)


                                                     gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGGTCGAAACATc                                                 >  2:1004889/1‑101 (MQ=255)


                                                     gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA..A.CT.GACC...C.GGCA.ACGGCC.TATGCGCT..GGACGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActac                                                 >  1:3824646/1‑98 (MQ=2)


                                                     gTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..GC.TG.GCGCGCGC.CGCG.CCGGATCTTTGT.CT..G..CGCG.GTCGCTCCCCCCGCGGGGGCGTGGGTCGAAActc                                                  >  1:1057255/1‑99 (MQ=9)


                                                      tCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGGTCGAAACATCa                                                >  1:3577883/1‑101 (MQ=255)


                                                      tCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCa                                                >  1:4860951/1‑101 (MQ=255)


                                                      tCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCa                                                <  1:2667094/101‑1 (MQ=255)


                                                      tCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCa                                                <  1:1600159/101‑1 (MQ=255)


                                                      tCGCTCCCCCCGCGGGGGCGTGGATCGAAACA..A.CT.GACC...C.GGCA.ACGGCC.TATGCGCT..GGACGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActaca                                                <  1:1936375/101‑5 (MQ=2)


                                                      tCGCTCCACCCGCGGGGTCGTGGGCCGAAACA.ACGCG.GCGCG.GG.CCTA.T.GGCTGTCGCC.CC..C..CCCC.GTCGCTCCCCCCCCGGGGGCGTGGATCGAAActgc                                                 <  2:710065/101‑4 (MQ=2)


                                                       cGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GC.GT.GCGCG.CCATGAATTCATCG.AGCGC.CA..T..CGAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACac                                                  >  1:1221739/1‑100 (MQ=2)


                                                        gCTCCCCCCGCGGGGGCGTGGATCGAAACT.GC.GT.GCGCG.CCATGAATTCATCG.AGCGC.CA..T..CGAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACacc                                                 >  1:4938516/1‑99 (MQ=2)


                                                        gCTCCCCCCGCGGGGGCGTGGATCGAAACA..A.CT.GACC...C.GGCA.ACGGCC.TATGCGCT..GGACGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActacacc                                              >  1:3393917/1‑95 (MQ=2)


                                                        ccTCCCCCCGCGGGGGCGGGGATCGAAACA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCacc                                              <  2:4909765/100‑3 (MQ=255)


                                                         cTCCCCCCGCGGGGGCGTGGATCGAAACT.GC.GT.GCGCG.CCATGAATTCATCG.AGCGC.CA..T..CGAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCa                                                <  2:2053069/101‑1 (MQ=2)


                                                         cTCCCCCCGCGGGGGCGTGGATCGAAAC..GC.TG.GCGCGCGC.CGCG.CCGGATCTTTGT.CT..G..CGCG.GTCGCTCCCCCCGCGGGGGCGTGGATGGAAActcggcc                                              >  2:319463/1‑95 (MQ=9)


                                                          tCCCCCCGCGGGGGCGTGGATCGAAACT.GC.GT.GCGCG.CCATGAATTCATCG.AGCGC.CA..T..CGAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCaa                                               <  1:2944103/101‑2 (MQ=2)


                                                          tCCCCCCGCGGGGGCGTGGATCGAAACA.CC.CG.GCGCC.GC.AGCG.AGTGCG.TCTGA.AC..A..GGAT.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActatgctgg                                            >  2:2807018/1‑93 (MQ=2)


                                                           ccccccGCGGGGGCGTGGATCGAAACA..A.CT.GACC...C.GGCA.ACGGCC.TATGCGCTGGG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActacaccggg                                           >  1:4245610/1‑92 (MQ=2)


                                                           ccccccGCGGGGGCGTGGATCGAAACA..A.CT.GACC...C.GGCA.ACGGCC.TATGCGCT..GGACGTG.GTCGCTCCCCCCGCGGGGGCGTGGGTCGaaaatacaccggg                                           >  2:1955271/1‑91 (MQ=2)


                                                           ccccccGCGGGGGCGTGGATCGAAACA..A.CT.GACC...C.GGCA.ACGGCC.TATGCGCT..GGACGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActacaccggg                                           <  2:4469526/101‑10 (MQ=2)


                                                            cccccGCGGGGGCGTGGATCGAAACA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCtcgc                                          >  2:2934152/1‑100 (MQ=255)


                                                              cccGCGGGGGCGTGGATCGAAACA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCtcgtcg                                        >  1:1305278/1‑101 (MQ=255)


                                                                cgcgGGGGCGTGGATCGAAACT.GC.GT.GCGCG.CCATGAATTCATCG.AGCGC.CA..T..CGAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCaatgccga                                         <  2:3670359/101‑8 (MQ=0)


                                                                cgcgGGGGCGTGGATCGAAACA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGtt                                      <  1:3333269/101‑1 (MQ=255)


                                                                 gcgGGGGCGTGGATCGAAACA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGATg                                     >  2:4255975/1‑101 (MQ=255)


                                                                  cgGGGGCGTGGATCGAAACA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTgg                                    <  1:1394581/101‑1 (MQ=255)


                                                                  cgGGGGCGTGGATCGAAACA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTgg                                    >  1:639669/1‑101 (MQ=255)


                                                                   gggggCGTGGATCGAAACA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGt                                   >  1:4378169/1‑101 (MQ=255)


                                                                       gCGTGGATCGAAACA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGc                               >  2:779099/1‑101 (MQ=255)


                                                                       gCGTGGATCGAAACA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGc                               <  2:3336316/101‑1 (MQ=255)


                                                                        gggggATCGAAACA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGcc                              <  2:1504348/98‑1 (MQ=255)


                                                                        cGTGGATCGAAACA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGcc                              <  1:3496113/101‑1 (MQ=255)


                                                                         ggggATCGAAACA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCg                             <  1:2199597/99‑1 (MQ=255)


                                                                          tGGATCAAAACA.GC.CG.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCgg                            <  1:1791788/101‑1 (MQ=255)


                                                                           ggATCGAAACA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGa                           >  1:4006472/1‑101 (MQ=255)


                                                                           ggATCGAAACA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGa                           >  1:3777720/1‑101 (MQ=255)


                                                                           ggATCGAAACA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGa                           <  2:3755266/101‑1 (MQ=255)


                                                                           ggATCGAAACA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGa                           >  2:1399203/1‑101 (MQ=255)


                                                                             aTCGAAACA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACg                         <  1:2350078/101‑1 (MQ=255)


                                                                                gAAACA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATg                      <  1:771636/101‑1 (MQ=255)


                                                                                gAAACA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATg                      >  1:2536770/1‑101 (MQ=255)


                                                                                gAAACA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATg                      >  1:309201/1‑101 (MQ=255)


                                                                                 aaaCA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGt                     >  2:4302216/1‑101 (MQ=255)


                                                                                  aaCA.GC.CT.GGGCG.GC.CTCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTc                    <  1:1468078/101‑1 (MQ=255)


                                                                                  aaCA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTc                    <  1:1694266/101‑1 (MQ=255)


                                                                                       gC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTc                <  1:2753155/101‑1 (MQ=255)


                                                                                        c.cT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTcc               >  2:2398575/1‑100 (MQ=255)


                                                                                        c.cT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCg               >  1:2236265/1‑101 (MQ=255)


                                                                                             gcgcG.GC.CGCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTc            >  2:1358561/1‑101 (MQ=255)


                                                                                                 g.gC.CGCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTccccc        >  2:1131640/1‑101 (MQ=255)


                                                                                                   gC.CGCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTcccccc       <  1:2427407/101‑1 (MQ=255)


                                                                                                    c.cGCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTCCCCCcg      <  2:309148/101‑1 (MQ=255)


                                                                                                    c.cGCA.CCGGCT.TCCGC.CT..G..CGGG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCTCTCCCCCcg      <  2:3265388/101‑1 (MQ=255)


                                                                                                       gCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTCCCCCcgcg    >  2:4655587/1‑101 (MQ=255)


                                                                                                       gCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTCCCCCcgcg    >  1:3733803/1‑101 (MQ=255)


                                                                                                       gCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTCCCCCcgcg    <  1:4434090/101‑1 (MQ=255)


                                                                                                         a.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTCCCCCCGCggg  >  2:56684/1‑101 (MQ=255)


GGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GC.CT.GCGCG.GC.CGCA.TCGGCT.TCCGC.CT..G..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTCCCCCCGCGGG  >  NC_014034/1396850‑1397050

Base quality scores:


ATCG

< 3 ≤


ATCG

< 18 ≤


ATCG

< 25 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG