Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	974,308	2	.→C	100.0%	5.8	6	intergenic (+188/+71)	RCAP_rcc00884/RCAP_rcc00885	hypothetical protein/hypothetical protein
Rejected: E-value exceeds prediction threshold.
Reads supporting (aligned to +/- strand):  new base (3/3):  ref base (0/0):  total (3/3)

GGCGGGATCCGGCATGGCCG.TGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCC.C.GGG....GT..GTGCG.GAAGCCCCCGGCGGGTCGCCTCGGCGACAGCCGAGGCGAAATACCCCCGCCGCAACGGCCGGTTCTC  >  NC_014034/974246‑974380                                                                        |                                                                          ggcgggATCGGGCAGGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCGG.GGG....GTCCGGGGGCGGAGCCCCCGGCGGGTCGCCTCGGCGAc                                         <  2:1200225/101‑1 (MQ=2)  gcgggATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCC.CGGGG....GTCCGGGGGCGGAGCCCCCGGCGGGTCGCCTCGGCGACa                                        <  2:610303/101‑1 (MQ=14)              ggggccgctGCGCGGGGGTTTGTTTTCCCCTTGCGACAAATCCCC.G.GGGGGCCGG..GGGGG.GGAGCCCCCGGCGGGTCGCCTCGGCGACAGCCGAGGCGaaa                            <  1:3726384/93‑1 (MQ=0)                                  tGTTTTCACCTTGCGACAAATATCC.CGGGG....GTCCGGGGGCGGAGCCCCCGGCGGGGCGGCGCGGGGGGAGCCGAGGCGGAAAAACACCGCCGCacccggcc        >  1:1444707/1‑94 (MQ=2)                                     tttCACCTTGCGACAAATATCC.CGGGG....GTCCGGGGGCGGAGCCCCCGGCGGGGGGCCCCGGCGGCCGCCGCGGCGGAAAACACCCGCCCCACCCGCCgggt     >  1:2736440/1‑99 (MQ=2)                                     tttCACCTTGCGACAAATATCC.CGGGG....GTCCGGGGGCGGAGCCCCCGGCGGGGCGGCCCGGCGGCCGCCGCGGGGGAAAAAACCCGCCGCCACCGCCgggg     >  2:88855/1‑99 (MQ=2)                                        cACCTTGCGACAAATATCC.C.GGGT...GTCCGGGGGCGGAGCCCCCGGCGGGTCGCCTCGGCGACAGCCGAGGCGAAATACCCCGGCCGCAACGGCCGGTtctc  <  2:4788687/101‑1 (MQ=14)                                                                        |                                                                          GGCGGGATCCGGCATGGCCG.TGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCC.C.GGG....GT..GTGCG.GAAGCCCCCGGCGGGTCGCCTCGGCGACAGCCGAGGCGAAATACCCCCGCCGCAACGGCCGGTTCTC  >  NC_014034/974246‑974380 Base quality scores:  ATCG  < 3 ≤  ATCG  < 15 ≤  ATCG  < 25 ≤  ATCG  < 33 ≤  ATCG  < 41 ≤  ATCG