| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,395,744 | G→C | 10.2% | intergenic (+556/‑375) | RCAP_rcc01306 → / → RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,395,744 | 0 | G→C | 10.2% | 64.2 ‑1.4 ‑0.0 | 284 | intergenic (+556/‑375) | RCAP_rcc01306/RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (11/18): ref base (128/127): total (139/145) | ||||||||||
| Fisher's exact test strand distribution p-value = 2.43e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.97e-01 | ||||||||||
Only 100 of 310 total aligned reads displayed.
CGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTCCCCCCG > NC_014034/1395644‑1395844
|
gcgGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..gc > 1:1235156/1‑101 (MQ=255)
gcgGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..gc < 1:3567444/101‑1 (MQ=255)
gcgGGGGCGGGGATCGAAACATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..gc < 2:325383/101‑1 (MQ=255)
ggggCGTGGATCGAAACATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCa > 2:3915629/1‑101 (MQ=255)
ggggTGGATCGAAACATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCaaa < 1:3068081/98‑1 (MQ=255)
ggCGTGGATCGAAACATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCaaa > 2:521171/1‑101 (MQ=255)
ggCGTGGATCGAAACATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCaaa > 1:728828/1‑101 (MQ=255)
gCGTGGATCGAAACATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAAc < 2:2212242/101‑1 (MQ=255)
tGGCTCGAAACATCTGCTTGTAGGCGGCGGGGAGTGGGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGAGCTG..GCGCAAACGG..a < 1:334782/101‑1 (MQ=25)
tGGATCGAAACATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..a > 1:4838796/1‑101 (MQ=255)
ggATCGAAACATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..aa > 2:2285565/1‑101 (MQ=255)
gATCGAAACATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..aaa > 1:138248/1‑101 (MQ=255)
gATCGAAACATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..aaa > 2:3603901/1‑101 (MQ=255)
cGAAACATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTc > 1:516782/1‑101 (MQ=255)
gAAACATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCt > 2:1896613/1‑101 (MQ=255)
aaaCATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.g > 1:2734176/1‑101 (MQ=255)
aaaCATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.g < 1:220889/101‑1 (MQ=255)
aCATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.g.tc > 1:1928921/1‑101 (MQ=255)
tCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGCCT.g.ccgtc > 2:3679848/1‑101 (MQ=255)
cTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.tcgtcg > 1:3700067/1‑101 (MQ=255)
ggTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AACGTCT.G.TCGTCGCT.ccc < 1:4413511/100‑1 (MQ=255)
gTAGTCGGGGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.cccc < 1:1161287/101‑1 (MQ=255)
gTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.cccc < 2:4599327/101‑1 (MQ=255)
gTCGGGGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCcg < 1:3210529/101‑1 (MQ=255)
ggcggGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCgg > 2:2121547/1‑101 (MQ=255)
gggCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCggggg > 1:4037085/1‑101 (MQ=255)
gggCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCggggg > 1:4889940/1‑101 (MQ=255)
gggCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCggggg > 1:3318497/1‑101 (MQ=255)
ggCGGTCCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGc < 1:3888888/101‑1 (MQ=255)
gCAGTGCGAGCCGCAGTCGCGCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCCGCGGGGGc < 2:2617497/101‑1 (MQ=38)
aGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTg < 1:323472/101‑1 (MQ=255)
aGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCN.CCCCCCGCGGGGGCGTg > 2:1196052/1‑101 (MQ=255)
tCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGAt > 1:2637204/1‑101 (MQ=255)
cGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATc < 2:721739/101‑1 (MQ=255)
gattcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCT.CCCCCCGCGGGGGCGTGGATc > 2:1027640/5‑101 (MQ=2)
gattcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATC..GCCGATCTGGGTAAGGCCG.G.GGGTCGCT.CCCCCCGCGGGGGCGTGGATc > 2:506593/5‑101 (MQ=2)
gCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGaa < 2:4364384/101‑1 (MQ=255)
ttcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATC..GCCGATCTGGGTACGGCCG.G.TGGTCGCT.CCCCCCGCGGGGGCGCGGATCGa > 1:4263048/3‑101 (MQ=0)
ttcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCT.CCCCCCGCGGGGGCGTGGATCGa < 1:2681320/99‑1 (MQ=2)
tcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCT.CCCCCCGCGGGGGCGTGGATCGaa > 2:3778276/2‑101 (MQ=2)
gCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAcc > 2:4111666/1‑101 (MQ=255)
ctggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT.GACCAGATCCGCAATCGG..CCGGGCTCGATCGTCGCT.CCCCCCGCGGGGGCGTGGATCGaaa < 2:4923984/98‑1 (MQ=2)
tggTCGCCCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT.GACCAGATCCGCAATCGG..CCGGGCTCGATCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAc < 2:1387470/99‑1 (MQ=2)
aGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAc < 2:4756481/101‑1 (MQ=2)
gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAca > 1:1683291/1‑100 (MQ=2)
gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCTgc > 2:4007226/1‑101 (MQ=255)
gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCTgc > 1:1314846/1‑101 (MQ=255)
gTCGCTCCCCCCGCGGGGGAGTGGATCGAAACT.GGTATGGATCTG..GCGTAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCTgc < 1:2830236/101‑1 (MQ=255)
tCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAcac < 1:2535894/101‑3 (MQ=2)
tCGCCCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCTgcg < 1:4286753/101‑1 (MQ=255)
cGCTCCCCCCGCGGGGGTGTGGATCGAAACT.TG.AT.GACCAGATCCGCAATCGG..CCGGGCTCGATCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCtat < 2:4539446/101‑3 (MQ=2)
cGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAcacc < 1:1849072/101‑4 (MQ=2)
cGCTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT.GACCAGATCCGCAATCGG..CCGGGCTCGATCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCtat < 2:4289950/101‑3 (MQ=2)
cGCTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT.GACCAGATCCGCAATCGG..CCGGGCTCGATCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCtat < 1:4949381/101‑3 (MQ=2)
cGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCTgcgg > 1:452418/1‑101 (MQ=255)
cGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGGCT.G.TCCTCGCT.CCCCCCGCGGGGGCGGGGCTCGAAAGCTgtgg > 2:4184789/1‑101 (MQ=25)
gCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAcaccc > 2:4984721/1‑97 (MQ=2)
gCTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT.GACCAGATCCGCAATCGG..CCGGGCTCGATCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCtatg > 2:3416623/1‑98 (MQ=2)
gCTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT.GACCAGATCCGCAATCGG..CCGGGCTCGATCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCtatg < 1:1057341/101‑4 (MQ=2)
gCTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT.GACCAGATCCGCAATCGG..CCGGGCTCGATCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCtatg < 1:155601/101‑4 (MQ=2)
gCTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT.GACCAGATCCGCAATCGG..CCGGGCTCGATCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCtatg < 1:3994964/101‑4 (MQ=2)
gCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCTgcggc < 1:618059/101‑1 (MQ=255)
cTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAcacccg < 2:4893434/101‑6 (MQ=2)
cTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAcacccg > 2:2897307/1‑96 (MQ=2)
cTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT.GACCAGATCCGCAATCGG..CCGGGCTCGATCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCtatga < 1:4987852/101‑5 (MQ=2)
tCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT.GACCAGATCCGCAATCGG..CCGGGCTCGATCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAcgtatgag < 1:2066794/101‑8 (MQ=2)
tCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT.GACCAGATCCGCAATCGG..CCGGGCTCGATCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCtatgag < 1:3037247/101‑6 (MQ=2)
tCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT.GACCAGATCCGCAATCGG..CCGGGCTCGATCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCtatgag > 2:3106645/1‑96 (MQ=2)
tCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT.GACCAGATCCGCAATCGG..CCGGGCTCGATCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCtatgag > 1:2439499/1‑96 (MQ=2)
tCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCTgcggcgg > 2:1599849/1‑100 (MQ=255)
ccccccGCGGGGGCGTGGATCGAAACTCGGCAAGGACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAcacccggc < 2:4338879/101‑8 (MQ=0)
ccccccGCGGGGGCGTGGATCGAAACTCGGCAAGGACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAAcacccggc > 1:2159312/1‑94 (MQ=0)
ccccccGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTg > 1:84409/1‑101 (MQ=255)
ccccccGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTg < 2:1530746/101‑1 (MQ=255)
cccccGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGa < 2:3727125/101‑1 (MQ=255)
cgcgGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAgatc > 2:5017295/1‑98 (MQ=255)
gggggCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCa > 1:2319675/1‑101 (MQ=255)
ggggCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAg > 2:1964466/1‑101 (MQ=255)
gggCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAgg > 2:2848348/1‑100 (MQ=255)
ggCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTg < 2:3359435/101‑1 (MQ=255)
ggCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGCGGATCGAAACCTGCGGCGTGAGTTGCCAGTg > 1:3621578/1‑101 (MQ=255)
gCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGa < 2:2694452/101‑1 (MQ=255)
cGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGAt < 1:2384191/101‑1 (MQ=255)
gTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATa > 2:2752649/1‑101 (MQ=255)
ggATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGa > 1:4601131/1‑101 (MQ=255)
gATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGACAGAc < 2:4273559/101‑1 (MQ=255)
tCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGc < 1:4627997/101‑1 (MQ=255)
gAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCg > 2:2298444/1‑101 (MQ=255)
aaaCT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGt > 2:1840929/1‑101 (MQ=255)
aCT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGCGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTgg > 1:2971400/1‑101 (MQ=255)
tATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTc > 1:3443522/1‑101 (MQ=255)
aTGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCg < 2:2016822/101‑1 (MQ=255)
ggATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGTCGTCGCt > 2:4501529/1‑101 (MQ=255)
ggATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCt > 1:3807805/1‑101 (MQ=255)
aTCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTcc > 2:2225371/1‑101 (MQ=255)
tG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTccccc < 2:3862515/101‑1 (MQ=255)
g..gCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTcccccc > 2:4673375/1‑101 (MQ=255)
g..gCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTcccccc < 1:929284/101‑1 (MQ=255)
g..gCGCAAACGG..AAAGTCT.G.TCGTCGCC.CCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTcccccc < 1:2115748/101‑1 (MQ=255)
gcgcAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTccccccc > 2:352936/1‑100 (MQ=255)
|
CGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTCCCCCCG > NC_014034/1395644‑1395844
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|