| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,396,013 | C→T | 13.9% | intergenic (+825/‑106) | RCAP_rcc01306 → / → RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,396,013 | 0 | C→T | 13.9% | 101.6 ‑1.2 ‑0.3 | 295 | intergenic (+825/‑106) | RCAP_rcc01306/RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (17/24): ref base (128/126): total (145/150) | ||||||||||
| Fisher's exact test strand distribution p-value = 3.16e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 4.87e-01 | ||||||||||
Only 100 of 315 total aligned reads displayed.
GGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGC > NC_014034/1395913‑1396112
|
gggggCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCgcgc < 1:1119939/101‑1 (MQ=255)
ggggCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCt > 1:3607684/1‑101 (MQ=255)
ggggCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGAAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCt > 2:4063597/1‑101 (MQ=255)
gggCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCtt > 2:3262068/1‑101 (MQ=255)
gCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGc < 1:1013914/101‑1 (MQ=255)
gTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCt < 2:56780/101‑1 (MQ=255)
gTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCt > 2:121496/1‑101 (MQ=255)
tGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTc > 2:834981/1‑101 (MQ=255)
tGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTc > 1:1180577/1‑101 (MQ=255)
tGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTc < 2:2869657/101‑1 (MQ=255)
tGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTc > 1:3727840/1‑101 (MQ=255)
tGGATCGAAACGAGGCGTTCATGGCCTACGTCGGGCAGTGCACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTc < 2:4146794/101‑1 (MQ=255)
naTCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..Ac > 1:150464/2‑101 (MQ=255)
gATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..Ac > 2:3207779/1‑101 (MQ=255)
cGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGcc > 1:987302/1‑101 (MQ=255)
cGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGcc > 1:191017/1‑101 (MQ=255)
gAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCt > 1:1292857/1‑101 (MQ=255)
aaaGGATGCGTTCATGGCCTACGGCGGGCAGTGGACTGGTCGCTCCCCCCGTGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTg < 1:4275467/101‑1 (MQ=255)
gATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.cgc > 1:736143/1‑101 (MQ=255)
aTGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.cgct > 2:4951606/1‑100 (MQ=255)
gCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTc < 2:1446199/101‑1 (MQ=255)
gCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTc < 1:4367512/101‑1 (MQ=255)
cGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCg > 2:544082/1‑101 (MQ=255)
tCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTc > 1:637735/1‑101 (MQ=255)
tCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTc > 2:4467914/1‑101 (MQ=255)
aTGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTccc > 1:2755161/1‑101 (MQ=255)
ggCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTccccc < 2:4269668/101‑1 (MQ=255)
ggCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTccccc > 1:2956853/1‑101 (MQ=255)
gCCTACGTCGGGCAGGGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTcccccc < 2:3459970/101‑1 (MQ=255)
gCCTACGGCGGGCAGTGGACTGGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTcccccc < 1:1412277/101‑1 (MQ=255)
ccTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCcg < 1:4007528/101‑1 (MQ=255)
cTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCcgc < 2:19189/101‑1 (MQ=255)
tACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCcgcg > 2:4411338/1‑101 (MQ=255)
gTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCgggg > 1:2618753/1‑101 (MQ=255)
gTCGGGCAGTGGACTGGGCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTGCCTTCGATCCGCACTGGCCGC..ACGCATGC.CGC..GGCGGTCCCCCCGCgggg > 2:2755143/1‑101 (MQ=25)
cGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGGGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGc < 1:4501849/101‑1 (MQ=255)
gggCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCg > 2:388777/1‑101 (MQ=255)
gCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTg < 1:38598/101‑1 (MQ=255)
cAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTgg < 1:3092989/101‑1 (MQ=255)
attgcacgggTCGCTCCCCCCGCGGGGGCGTGGATTGAAACTCTCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTTGCTCCCCCCGCGGGGGCGTGGa < 2:769882/93‑1 (MQ=37)
aGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTggg > 1:3026338/1‑100 (MQ=255)
tGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATc < 1:3501152/101‑1 (MQ=255)
ctgcgcggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC...GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGAt < 1:1861376/95‑1 (MQ=9)
tgcgcggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTGCCTCGATCCGTTC.AGCCTC...GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATc < 1:5002561/96‑1 (MQ=2)
tgcgcggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC...GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATc < 1:2058501/96‑1 (MQ=9)
gcgcggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC...GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCg > 2:1056044/5‑101 (MQ=2)
gACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGa < 1:1595402/101‑1 (MQ=255)
cTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGaaa < 1:1775693/101‑1 (MQ=255)
cTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGaaa > 2:4675284/1‑101 (MQ=255)
tGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc < 1:893138/101‑1 (MQ=255)
tGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGGGGATCGAAAc > 1:4741052/1‑101 (MQ=255)
tgtccccccccccGGGGGGGCGTCGATCGAAACTCCCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACa < 2:3558888/94‑1 (MQ=37)
gtttgCTCCCCCCGCGTGGGCGTTGATCGAAACTCGCCCTCGATCCGCGCTTGCCCC..ACGCCCTC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACa < 1:3373145/97‑1 (MQ=37)
ggTCCCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACa < 2:895575/101‑1 (MQ=255)
cGCTCCCCCCGCGGGGGCGTGGATCGAACCTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGgc < 2:395977/101‑1 (MQ=255)
cGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGgc > 1:2156435/1‑101 (MQ=255)
gccccccccGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGgcg < 2:3065657/98‑1 (MQ=255)
gCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTCGTATTCCGCG.CTG..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActtga > 2:4176948/1‑97 (MQ=2)
ccccccccGCGGGGGCGTGTATCGAAACTCTCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCTCTCCCCCCGCGGGGGCGTGGATCGAAACAGgcgc < 2:177550/99‑1 (MQ=255)
cTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGgcgc < 2:4492004/101‑1 (MQ=255)
cTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGgcgc > 2:1715640/1‑101 (MQ=255)
tCCCCCCGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC...GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActtgatg > 1:2409037/1‑95 (MQ=2)
ccccccGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCac > 2:1297279/1‑100 (MQ=255)
ccccccGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCAt > 1:2798659/1‑101 (MQ=255)
ccccGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC...GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActtgatgacc < 1:4878672/101‑10 (MQ=2)
ccGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGa < 2:4332613/101‑1 (MQ=255)
gcgGGGGCGTGGATCGACACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATg < 2:4538307/101‑1 (MQ=255)
gggggCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGta < 1:1690687/101‑1 (MQ=255)
ggggCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGtat < 1:662823/101‑1 (MQ=255)
ggggCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGtat < 1:4420703/101‑1 (MQ=255)
gggCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGtata < 1:565828/101‑1 (MQ=255)
ggCGTGGATCGAACCTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTatat < 1:4589430/101‑1 (MQ=255)
ggCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTatat < 1:31227/101‑1 (MQ=255)
ggCGTGGATCGAAACGCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTatat < 1:2184365/101‑1 (MQ=255)
gCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATg < 2:1104671/101‑1 (MQ=255)
gCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATg > 2:2400665/1‑101 (MQ=255)
cGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGc < 2:2720318/101‑1 (MQ=255)
tGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGccc > 2:2545446/1‑101 (MQ=255)
ggATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCg > 2:7052/1‑101 (MQ=255)
cGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGCTCGAAACAGGCGCATCTGATGCATATGCCCGGTga > 2:4423665/1‑101 (MQ=255)
cGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTatatagatcggaa > 1:3224743/1‑92 (MQ=255)
cGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCTGTga < 2:1500246/101‑1 (MQ=255)
cGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTga > 2:3712323/1‑101 (MQ=255)
gAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTgag < 2:1620685/101‑1 (MQ=255)
gAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTgag < 1:1765523/101‑1 (MQ=255)
gAAACGCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTgag < 2:2051547/101‑1 (MQ=255)
aaaCTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTgaga < 2:2290672/101‑1 (MQ=255)
aaaCTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTgaga < 2:2618568/101‑1 (MQ=255)
aaaCTCGCCCGCGATCCGCGCTTGCCCC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTgaga < 1:4830353/101‑1 (MQ=255)
accTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCGCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGAc < 2:2194806/99‑1 (MQ=255)
aaCTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGAc < 2:3319218/101‑1 (MQ=255)
aaCTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGAc < 1:10771/101‑1 (MQ=255)
gCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTg > 2:1168684/1‑101 (MQ=255)
cccTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGt < 1:3655839/101‑1 (MQ=255)
cGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCt > 2:13508/1‑101 (MQ=255)
gATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTc < 1:121512/101‑1 (MQ=255)
ccGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTcccc < 1:4205872/101‑1 (MQ=255)
ccGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTcccc > 1:232131/1‑101 (MQ=255)
cgcgCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTccccc < 2:4872164/101‑1 (MQ=255)
gcgcTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTcccccc < 1:2239181/101‑1 (MQ=255)
|
GGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTC..ACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGC > NC_014034/1395913‑1396112
Base quality scores:
ATCG
< 3 ≤
ATCG
< 16 ≤
ATCG
< 24 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|