BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_014034	1,398,314	A→G	100%	intergenic (+618/+1280)	RCAP_rcc01307 → / ← RCAP_rcc01309	hypothetical protein/IS66 family transposase

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	1,398,314	0	A→G	100.0%	925.2	238	intergenic (+618/+1280)	RCAP_rcc01307/RCAP_rcc01309	hypothetical protein/IS66 family transposase
Reads supporting (aligned to +/- strand): new base (115/123): ref base (0/0): total (115/123)

Only 100 of 243 total aligned reads displayed.


GCCGCGGGTCGCTGATACCGCGCCCAGCTCTCATACGGGGCGATGGCGATGATGCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGAATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCGAGACCAGTGTCGCGGACTGTCGCCACGCGGATGCCGCCCCCCTCGGCCCTCATA  >  NC_014034/1398216‑1398411


gCCGCGGGTCGCTGATACCGCGCCCAGCTCTCATACGGGGCGATGGCGATGATGCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGAt                                                                                                 >  2:2091397/1‑101 (MQ=255)


gCCGCGGGTCGCTGATACCGCGCCCAGCTCTCATACGGGGCGATGGCGATGATGCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGAt                                                                                                 >  1:2236901/1‑101 (MQ=255)


    cgGGTCGCTGATACCGCGCCCAGCTCTCATACGGGGCGATGGCGATGATGCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGa                                                                                             <  2:3417106/101‑1 (MQ=255)


     gggTCGCTGATACCGCGCCCAGCTCTCATACGGGGCGATGGCGATGATGCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGAc                                                                                            >  2:817268/1‑101 (MQ=255)


     gggTCGCTGATACCGCGCCCAGCTCTCATACGGGGCGATGGCGATGATGCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGAc                                                                                            <  2:547444/101‑1 (MQ=255)


      ggTCGCTGATACCGCGCCCAGCTCTCATACGGGGCGATGGCGATGATGCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACg                                                                                           <  1:1007307/101‑1 (MQ=255)


      ggTCGCTGATACCGCGCCCAGCTCTCATACGGGGCGATGGCGATGATGCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACg                                                                                           <  1:786080/101‑1 (MQ=255)


       gTCGCTGATACCGCGCCCAGCTCTCATACGGGGCGATGGCGATGATGCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACgg                                                                                          <  1:1355477/101‑1 (MQ=255)


       gTCGCTGATACCGCGCCCAGCTCTCATACGGGGCGATGGCGATGATGCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACgg                                                                                          <  1:3438012/101‑1 (MQ=255)


           cTGATACCGCGCCCAGCTCTCATACGGGGCGATGGCGATGATGCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGtt                                                                                      >  2:2412358/1‑101 (MQ=255)


            tGATACCGCGCCCAGCTCTCATACGGGGCGATGGCGATGATGCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTg                                                                                     >  2:977281/1‑101 (MQ=255)


            tGATACCGCGCCCAGCTCTCATACGGGGCGATGGCGATGATGCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTg                                                                                     >  2:86459/1‑101 (MQ=255)


             gATACCGCGCCCAGCTCTCATACGGGGCGATGGCGATGATGCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTgg                                                                                    >  2:2127707/1‑101 (MQ=255)


              aTACCGCGCCCAGCTCTCATACGGGGCGATGGCGATGATGCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTggg                                                                                   >  2:1150199/1‑101 (MQ=255)


               tACCGCGCCCAGCTCTCATACGGGGCGATGGCGATGATGCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTgggg                                                                                  <  1:4056131/101‑1 (MQ=255)


               tACCGCGCCCAGCTCTCATACGGGGCGATGGCGATGATGCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTgggg                                                                                  <  2:2658946/101‑1 (MQ=255)


                aCCGCGCCCAGCTCTCATACGGGGCGATGGCGATGATGCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGa                                                                                 <  2:2426478/101‑1 (MQ=255)


                  cgcgCCCAGCTCTCATACGGGGCGATGGCGATGATGCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGc                                                                               <  1:603152/101‑1 (MQ=255)


                  cgcgCCCAGCTCTCATACGGGGCGATGGCGATGATGCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGc                                                                               <  2:120553/101‑1 (MQ=255)


                     gcCCAGCTCTCATACGGGGCGATGGCGATGATGCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCgag                                                                            >  1:89781/1‑101 (MQ=255)


                      cccAGCTCTCATACGGGGCGATGGCGATGATGCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCgaga                                                                           >  1:2667182/1‑101 (MQ=255)


                      cccAGCTCTCATACGGGGCGATGGCGATGATGCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCgaga                                                                           <  1:3724518/101‑1 (MQ=255)


                       ccAGCTCTCATACGGGGCGATGGCGATGATGCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGaa                                                                          <  2:3772243/101‑1 (MQ=255)


                        cAGCTCTCATACGGGGCGATGGCGATGATGCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAAc                                                                         >  1:1092398/1‑101 (MQ=255)


                         aGCTCTCATACGGGGCGATGGCGATGATGCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAAcc                                                                        <  2:1648448/101‑1 (MQ=255)


                         aGCTCTCATACGGGGCGATGGCGATGATGCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAAcc                                                                        <  1:3796798/101‑1 (MQ=255)


                         aGCTCTCATACGGGGCGATGGCGATGATGCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAAcc                                                                        <  1:5046147/101‑1 (MQ=255)


                          gCTCTCATACGGGGCGATGGCGATGATGCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCg                                                                       <  1:1268075/101‑1 (MQ=255)


                           ctctCATACGGGGCGATGGCGATGATGCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCgg                                                                      >  1:3164917/1‑101 (MQ=255)


                           ctctCATACGGGGCGATGGCGATGATGCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCgg                                                                      <  1:2831899/101‑1 (MQ=255)


                            tctcATACGGGGCGATGGCGATGATGCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGc                                                                     >  1:3843339/1‑101 (MQ=255)


                             ctcATACGGGGCGATGGCGATGATGCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCt                                                                    >  2:3897277/1‑101 (MQ=255)


                              tcATACGGGGCGATGGCGATGATGCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTa                                                                   >  2:497852/1‑101 (MQ=255)


                               naTACGGGGCGATGGCGATGATGCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGNGAGCGAGnannnnnnnn                                                                  >  2:293896/2‑93 (MQ=255)


                               cATACGGGGCGATGGCGATGATGCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTAc                                                                  >  1:1856450/1‑101 (MQ=255)


                               cATACGGGGCGATGGCGATGATGCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTAc                                                                  >  2:3548497/1‑101 (MQ=255)


                                 tACGGGGCGATGGCGATGATGCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTAcgg                                                                >  2:1493887/1‑101 (MQ=255)


                                    ggggCGATGGCGATGATGCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTAcggtcg                                                             <  1:1178339/101‑1 (MQ=255)


                                     gggCGATGGCGATGATGCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTAcggccgg                                                            >  2:3166807/1‑101 (MQ=255)


                                       gcgatggcgatgATGCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGtt                                                          <  2:4481674/101‑1 (MQ=255)


                                        cgatggcgatgATGCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTc                                                         <  2:4376398/101‑1 (MQ=255)


                                        cgatggcgatgATGCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTc                                                         <  1:4018823/101‑1 (MQ=255)


                                         gatggcgatgATGCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCg                                                        <  2:3223671/101‑1 (MQ=255)


                                         gatggcgatgATGCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCg                                                        >  1:2393281/1‑101 (MQ=255)


                                          atggcgatgATGCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGGTGTGACGGAGTTTGGGAGCGAGAACCGGCTACGGTCGGTTCga                                                       >  1:322563/1‑101 (MQ=255)


                                           tggcgatgATGCTCCTGCGGACCTGACGGGATGGCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCgag                                                      >  2:4196776/1‑101 (MQ=255)


                                           tggcgatgATGCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCgag                                                      <  1:1844649/101‑1 (MQ=255)


                                            ggcgatgATGCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCgaga                                                     <  1:4525979/101‑1 (MQ=255)


                                            ggcgatgATGCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCgaga                                                     <  1:3399850/101‑1 (MQ=255)


                                            ggcgatgATGCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCgaga                                                     >  2:428692/1‑101 (MQ=255)


                                              cgatgATGCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCGAGAcc                                                   <  1:2091545/101‑1 (MQ=255)


                                              cgatgATGCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCGAGAcc                                                   >  1:1978956/1‑101 (MQ=255)


                                                atgatgCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCGAGACCAg                                                 <  2:3075766/101‑1 (MQ=255)


                                                   atgCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCGAGACCAgtgt                                              >  1:1487434/1‑101 (MQ=255)


                                                    tgCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCGAGACCAGTGTc                                             <  2:2350381/101‑1 (MQ=255)


                                                      cTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCGAGACCAGTGTcgc                                           <  1:2525848/101‑1 (MQ=255)


                                                        ccTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCGAGACCAGTGTCGCgg                                         >  1:2710389/1‑101 (MQ=255)


                                                        ccTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCGAGACCAGTGTCGCgg                                         <  2:552206/101‑1 (MQ=255)


                                                        ccTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCGAGACCAGTGTCGCgg                                         <  2:2589939/101‑1 (MQ=255)


                                                        ccTGCGGACCTGACGGGATGCCGGACCGCCTGCCGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCGAGACCAGTGTCGCgg                                         <  1:4305986/101‑1 (MQ=255)


                                                         cTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCGAGACCAGTGTCGCGGa                                        <  1:809561/101‑1 (MQ=255)


                                                           gCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGGGCGAGAACCGGCTACGGTCGGTTCGAGACCAGTGACGCggccg                                      >  1:4812426/1‑98 (MQ=255)


                                                            cGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCGAGACCAGTGTCGCGGACTg                                     >  2:510495/1‑101 (MQ=255)


                                                            cGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCGAGACCAGTGTCGCGGACTg                                     <  1:632820/101‑1 (MQ=255)


                                                              gACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCGAGAACAGTGTCGCGGACTGTc                                   >  2:1739650/1‑101 (MQ=255)


                                                                 cTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCGAGACCAGTGTCGCGGACTGTCGcc                                <  2:1363767/101‑1 (MQ=255)


                                                                 cTGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCGAGACCAGTGTCGCGGACTGTCGcc                                <  2:2710188/101‑1 (MQ=255)


                                                                  tGACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCGAGACCAGTGTCGCGGACTGTCGCCa                               <  2:329604/101‑1 (MQ=255)


                                                                   gACGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCGAGACCAGTGTCGCGGACTGTCGCCAc                              <  1:2535305/101‑1 (MQ=255)


                                                                    aCGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCGAGACCAGTGTCGCGGACTGTCGCCAcg                             <  2:1092285/101‑1 (MQ=255)


                                                                    aCGGGATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCGAGACCAGTGTCGCGGACTGTCGCCAcg                             <  2:4744934/101‑1 (MQ=255)


                                                                      gggATGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGTGAGAACCGGCTACGGTCGGTTCGAGACCAGTGTCGCGGACTGTCGCCAcgcg                           >  1:1440949/1‑101 (MQ=255)


                                                                          tGCCGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCGAGACCAGTGTCGCGGACTGTCGCCACGCGGATg                       <  2:4113053/101‑1 (MQ=255)


                                                                             cGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCGAGACCAGTGTCGCGGACTGTCGCCACGCGGATgccg                    <  2:179241/101‑1 (MQ=255)


                                                                             cGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCGAGACCAGTGTCGCGGACTGTCGCCACGCGGATgccg                    >  1:3590659/1‑101 (MQ=255)


                                                                             cGGACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCGAGACCAGTGTCGCGGACTGTCGCCACGCGGATgccg                    >  1:4744197/1‑101 (MQ=255)


                                                                             cGGACCGCCTGCGGCGCGCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCGAGACCAGTGTCGCGGACTGTCGCCACGCGGATgccg                    <  2:702884/101‑1 (MQ=255)


                                                                              ggACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCGAGACCAGTGTCGCGGACTGTCGCCACGCGGATgccgc                   <  1:3000378/101‑1 (MQ=255)


                                                                              ggACCGCCTGCCGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCGAGACCAGTGTCGCGGACTGTCGCCACGCGGATgccgc                   >  2:1933243/1‑101 (MQ=255)


                                                                               gACCGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCGAGACCAGTGTCGCGGACTGTCGCCACGCGGATgccgcc                  <  2:1327439/101‑1 (MQ=255)


                                                                                 ccGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCGAGACCAGTGTCGCGGACTGTCGCCACGCGGATGCCGcccc                >  1:2433214/1‑101 (MQ=255)


                                                                                  cGCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCGAGACCAGTGTCGCGGACTGTCGCCACGCGGATGCCGccccc               <  2:670717/101‑1 (MQ=255)


                                                                                   gCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCGAGACCAGTGTCGCGGACTGTCGCCACGCGGATGCCGcccccc              <  1:4959599/101‑1 (MQ=255)


                                                                                   gCCTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCGAGACCAGTGTCGCGGACTGTCGCCACGCGGATGCCGcccccc              <  1:977391/101‑1 (MQ=255)


                                                                                    ccTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCGAGACCAGTGTCGCGGACTGTCGCCACGCGGATGCCGCCCCCCt             >  1:4188695/1‑101 (MQ=255)


                                                                                    ccTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCGAGACCAGCGTCGCGGACTGTCGCCACGCGGATGCCGccccccc             >  2:4647947/1‑100 (MQ=255)


                                                                                     cTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCGAGACCAGTGTCGCGGACTGTCGCCACGCGGATGCCGCCCCCCTc            <  2:2514994/101‑1 (MQ=255)


                                                                                     cTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCGAGACCAGTGTCGCGGACTGTCGCCACGCGGATGCCGCCCCCCTc            >  2:4847129/1‑101 (MQ=255)


                                                                                     cTGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCGAGACCAGTGTCGCGGACTGTCGCCACGCGGATGCCGCCCCCCTc            <  1:2127855/101‑1 (MQ=255)


                                                                                      tGCGGCGCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCGAGACCAGTGTCGCGGACTGTCGCCACGCGGATGCCGCCCCCCTCg           <  2:2800713/101‑1 (MQ=255)


                                                                                        cggcgCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCGAGACCAGTGTCGCGGACTGTCGCCACGCGGATGCCGCCCCCCTCGGc         <  1:3054716/101‑1 (MQ=255)


                                                                                        cggcgCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCGAGACCAGTGTCGCGGACTGTCGCCACGCGGATGCCGCCCCCCTCGGc         >  1:2923278/1‑101 (MQ=255)


                                                                                         ggcgCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCGAGACCAGTGTCGCGGACTGTCGCCACGCGGATGCCGCCCCCCTCGGcc        >  2:3704490/1‑101 (MQ=255)


                                                                                         ggcgCTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCGAGACCAGTGTCGCGGACTGTCGCCACGCGGATGCCGCCCCCCTCCGcc        >  2:1303427/1‑101 (MQ=255)


                                                                                            gcTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCGAGACCAGTGTCGCGGACTGTCGCCACGCGGATGCCGCCCCCCTCGGCCCTc     >  2:2954312/1‑101 (MQ=255)


                                                                                             cTCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCGAGACCAGTGTCGCGGACTGTCGCCACGCGGATGCCGCCCCCCTCGGCCCTCa    >  2:783740/1‑101 (MQ=255)


                                                                                              tCAGGATGTGACGGAGTTGGGGAGCGTGAACCGGCTACGGTCGGTCCGAGACCAGTGTCGCGGACTGTCGCCACGCGGATGCCGCCCCCCTCGGCCCTCAt   <  1:4244506/101‑1 (MQ=255)


                                                                                              tCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCGAGACCAGTGTCGCGGACTGTCGCCACGCGGATGCCGCCCCCCTCGGCCCTCAt   <  1:724071/101‑1 (MQ=255)


                                                                                              tCAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCGAGACCAGTGTCGCGGACTGTCGCCACGCGGATGCCGCCCCCCTCGGCCCTCAt   >  1:4071556/1‑101 (MQ=255)


                                                                                               cAGGATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCGAGACCAGTGTCGCGGACTGTCGCCACGCGGATGCCGCCCCCCTCGGCCCTCATa  <  1:4870478/101‑1 (MQ=255)


GCCGCGGGTCGCTGATACCGCGCCCAGCTCTCATACGGGGCGATGGCGATGATGCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGAATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCGAGACCAGTGTCGCGGACTGTCGCCACGCGGATGCCGCCCCCCTCGGCCCTCATA  >  NC_014034/1398216‑1398411

Base quality scores:


ATCG

< 3 ≤


ATCG

< 20 ≤


ATCG

< 29 ≤


ATCG

< 34 ≤


ATCG

< 41 ≤


ATCG