| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,740,785 | G→C | 97.4% | intergenic (+22/+113) | cxp → / ← RCAP_rcc01610 | thermostable carboxypeptidase 1/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,740,785 | 0 | G→C | 97.4% | 4.0 ‑3.5 ‑1.0 | 230 | intergenic (+22/+113) | cxp/RCAP_rcc01610 | thermostable carboxypeptidase 1/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (109/115): ref base (0/6): total (109/121) | ||||||||||
| Fisher's exact test strand distribution p-value = 3.05e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.89e-02 | ||||||||||
Only 100 of 244 total aligned reads displayed.
GCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GA.GG.GG.CGCTGCCCCCCG.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCTTCAAATACCTCGGGGGGAGTCCCGCAGGG > NC_014034/1740690‑1740880
|
gCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAg > 1:4071554/1‑101 (MQ=255)
gCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAg > 1:382742/1‑101 (MQ=255)
gtttCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCg < 2:2899774/99‑1 (MQ=255)
cGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGc > 1:4998322/1‑101 (MQ=255)
cGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGc > 2:1853033/1‑101 (MQ=255)
cGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGc > 2:2542427/1‑101 (MQ=255)
gAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGcc > 1:2481117/1‑101 (MQ=255)
aGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCt < 1:2350214/101‑1 (MQ=255)
gCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTc < 2:4762237/101‑1 (MQ=255)
ccGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCg < 1:3556408/101‑1 (MQ=255)
cGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCgg > 2:400942/1‑101 (MQ=255)
cGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCCGCCCCCGC.CGAGGCGATGCCTCgg > 2:2749568/1‑101 (MQ=255)
aCGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGcc > 1:4692881/1‑101 (MQ=255)
aCGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GA.GG.GGCCGCTGCCCCCGC.CGAGGCGATGCCTCGGcc > 1:339913/1‑101 (MQ=255)
cGGAAGACCCGCTTCTGGACTATCTCGAAAGCAAATCCGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGccc < 1:33319/101‑1 (MQ=255)
cGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGccc > 1:3686724/1‑101 (MQ=255)
gaagaaCCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGGTGCCTCGGcccgc > 2:1650838/1‑99 (MQ=255)
aagaaCCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTGCCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGcccccc < 2:4910431/101‑1 (MQ=255)
aagaaCCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTCCCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGcccccc < 1:83615/101‑1 (MQ=255)
aagaaCCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGcccccc < 2:517621/101‑1 (MQ=255)
agaaCCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCg > 1:206526/1‑101 (MQ=255)
agaaCCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCg > 1:4743579/1‑101 (MQ=255)
agaaCCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCg > 1:1191723/1‑101 (MQ=255)
aaCCGCTTCTGGACTATCTCGAAAGCAAATCCGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCggg < 1:3980412/101‑1 (MQ=255)
ccGCTTCTGGACTATCTCGAAAGCAAATGCGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGat < 1:4450752/101‑1 (MQ=255)
ccGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGat < 2:90843/101‑1 (MQ=255)
gCTTCTGGACTATCTCGAAAGCAAATCCGCCGCGATCTCCCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGatat < 2:571501/101‑1 (MQ=37)
gCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGatat < 1:1900399/101‑1 (MQ=38)
gCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCCC.CGAGGCGATGCCTCGGCCCCCCGGGattt > 1:2465843/1‑99 (MQ=255)
cTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATAtt < 2:35973/101‑1 (MQ=38)
cTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATAtt < 1:1620350/101‑1 (MQ=38)
ttCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATAttt > 2:3742499/1‑101 (MQ=38)
tCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTc > 1:745247/1‑101 (MQ=38)
cTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCg < 1:4608126/101‑1 (MQ=38)
tGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGa > 1:541119/1‑101 (MQ=38)
tGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GA.GG.GGTCGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGa < 2:1083638/101‑1 (MQ=38)
ggACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAg > 1:2146330/1‑101 (MQ=38)
aTCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGa > 1:4396854/1‑101 (MQ=38)
aTCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGa > 2:709305/1‑101 (MQ=38)
tcGAAAGCAAATCCGCCGCGATCTACCGGCTTGGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGa < 1:991067/101‑1 (MQ=37)
tcGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGa > 1:1295697/1‑101 (MQ=37)
tcGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGa > 1:2834208/1‑101 (MQ=37)
tcGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCGCGGCCCCACGGGATATTTAGatcggaagag > 2:835218/1‑92 (MQ=255)
ctgAAAGCAAATCCGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGa < 2:4123767/99‑1 (MQ=37)
cGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGCTATTTCGAGAAAGATGaa > 2:3556007/1‑101 (MQ=255)
cGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGaa < 1:3856340/101‑1 (MQ=37)
cGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGaa < 2:1692953/101‑1 (MQ=37)
gAAAGCAAATCCCCCGCGGTCTGCGGGCTTGGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGaaa < 1:4178033/101‑1 (MQ=21)
gAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GG.GGCTGCCCCCGC.CTAGGCGATGCCTCGGCCCCCCGGGGGATTTCTAGGAAGAGGaaa > 1:490612/1‑101 (MQ=255)
gAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGaaa > 2:1162093/1‑101 (MQ=37)
aaaGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAg > 2:1963089/1‑101 (MQ=37)
cAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCAt < 1:1777986/101‑1 (MQ=38)
cAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCAt < 2:1726795/101‑1 (MQ=38)
cAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCAt > 2:2150861/1‑101 (MQ=37)
aaaTCCCCCGCGATCTACCGGCTTGGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATc < 2:1740040/101‑1 (MQ=25)
aaaTACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGTTGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATc > 1:3130717/1‑101 (MQ=37)
aaaTACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATc > 2:3173683/1‑101 (MQ=37)
aaTACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATcc > 1:975947/1‑101 (MQ=37)
aTACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCg > 2:3869973/1‑101 (MQ=37)
tACGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCgg > 2:2044418/1‑101 (MQ=37)
aCGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGt > 1:2041057/1‑101 (MQ=37)
aCGCCGCGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGt > 1:2424165/1‑101 (MQ=37)
gccgcGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGttt < 2:1383760/101‑1 (MQ=37)
ccgcGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCNNGnntn > 1:1754314/1‑100 (MQ=37)
ccgcGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTc > 1:1039955/1‑101 (MQ=37)
ccgcGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTc < 1:2281694/101‑1 (MQ=37)
ccgcGATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCGGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTc < 2:2449692/101‑1 (MQ=37)
cgcgATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCa < 1:401007/101‑1 (MQ=37)
gcttttttccGCCTTTGA.CGGC.GA.GGTGG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCAt < 2:2405366/93‑1 (MQ=21)
gcgATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCAt > 1:1502489/1‑101 (MQ=37)
gATCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCt > 1:5020973/1‑101 (MQ=37)
ttCTACCGGCTTTGG.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCtt < 2:4700847/100‑1 (MQ=25)
aTCTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGAAATTTCGAGCAAAATGAAAAGCCTCCGGTTTAATCtt > 1:2548279/1‑101 (MQ=255)
tCTGCCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTg < 1:2657641/101‑1 (MQ=25)
tCTCCCGGCTTTGA.GGGCGGG.GG.GG.CGC.GCCCCCCGCCGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTg < 1:3447684/101‑1 (MQ=21)
cTACCGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGc > 2:4789184/1‑101 (MQ=25)
ccGGCTTTGAGGGGG.GG.GG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCTTc < 1:2159353/101‑1 (MQ=21)
ccGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCTTc > 2:2813700/1‑101 (MQ=25)
cGGCTTTGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCCGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCTTCa > 2:2618459/1‑101 (MQ=25)
cGGCTTGGG.GGGCGGG.GG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCTTCa < 2:4066632/101‑1 (MQ=21)
tGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCTTCAAATAcc > 2:3809004/1‑101 (MQ=25)
tGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCTTCAAATAcc > 2:5019848/1‑101 (MQ=25)
tGA.GGGC.GAGGG.GG.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCTTCAAATAcc > 2:4256990/1‑101 (MQ=25)
cgaggg.gg.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCTTCAAATACCTCgggg > 1:2795889/5‑101 (MQ=255)
gaggg.gg.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCTTCAAATACCTCggggg > 1:1090660/4‑101 (MQ=255)
gaggg.gg.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCTTCAAATACCTCggggg < 2:3923090/98‑1 (MQ=255)
gggg.gt.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCTTCAAATACCTCgggggg < 2:3208576/99‑1 (MQ=255)
aggg.gg.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCTTCAAATACCTCgggggg > 2:4514249/3‑101 (MQ=255)
g.gg.CGCTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCTTCAAATACCTCGGGGGGAGt < 2:672853/101‑1 (MQ=255)
gg.CGCTGCCCCAGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCTTCAAATACCTCGGGGGGAGTc > 2:1775901/1‑101 (MQ=255)
g.cgcTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCTTCAAATACCTCGGGGGGAGTcc < 2:4995523/101‑1 (MQ=255)
g.cgcTCCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCTTCAAATACCTCGGGGGGAGTcc < 1:3733219/101‑1 (MQ=255)
gcgtttcccccgC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCTTCAAATACCTCGGGGGGAGTcc < 2:2658547/95‑1 (MQ=18)
cgcTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCTTCAAATACCTCGGGGGGAGTccc > 1:1348182/1‑101 (MQ=255)
gcTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCTTCAAATACCTCGGGGGGCGTCCCg > 2:1540838/1‑101 (MQ=255)
gcTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCTTCAAATACCTCGGGGGGAGTCCCg < 2:3538465/101‑1 (MQ=255)
gcTGCCCCCGC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCTTCAAATACCTCGGGGGGAGTCCCg > 2:3075875/1‑101 (MQ=255)
cccccgC.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCTTCAAATACCTCGGGGGGAGTCCCGCAgg < 2:1502359/101‑1 (MQ=255)
ccccGCCGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCTTCAAATACCTCGGGGGGAGTCCCGCAggg < 1:701513/101‑1 (MQ=255)
ccccGCCGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCTTCAAATACCTCGGGGGGAGTCCCGCAggg < 2:3731117/101‑1 (MQ=255)
|
GCGGGTTCGAGCCGACGGAAGAACCGCTTCTGGACTATCTCGAAAGCAAATACGCCGCGATCTACCGGCTTTGA.GGGC.GA.GG.GG.CGCTGCCCCCCG.CGAGGCGATGCCTCGGCCCCCCGGGATATTTCGAGCAAGATGAAAGGCATCCGGTTTCATCTTGCTTCAAATACCTCGGGGGGAGTCCCGCAGGG > NC_014034/1740690‑1740880
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 24 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|