| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,255,986 | Δ1 bp | 5.0% | intergenic (+156/+86) | RCAP_rcc01184 → / ← RCAP_rcc01185 | CsbD family protein/methyl‑accepting chemotaxis sensory transducer |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,255,986 | 0 | G→. | 5.0% | 31.6 ‑0.9 ‑0.0 | 258 | intergenic (+156/+86) | RCAP_rcc01184/RCAP_rcc01185 | CsbD family protein/methyl‑accepting chemotaxis sensory transducer |
| Reads supporting (aligned to +/- strand): new base (8/5): ref base (117/128): total (125/133) | ||||||||||
| Fisher's exact test strand distribution p-value = 4.00e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.47e-01 | ||||||||||
Only 100 of 281 total aligned reads displayed.
GCTGTGGTACCCCTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGG.AAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAA.G.AAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCGGTCAGGCGGCGCGC > NC_014034/1255895‑1256084
|
tgccccccgtcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGG.AAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.gggggggggg < 1:3497247/91‑1 (MQ=255)
gccccccgtcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGG.AAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGa < 2:1856897/92‑1 (MQ=255)
ccccccgtcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGG.AAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGaa > 1:2207803/9‑101 (MQ=255)
cccccccgcccTGGGGGGCCCCCCCCGGGAATTTTCCCCCAAGGGG.AAATGAACCCGGGGCCGGGCTTTCCCCTTGGGCCAAAATTCCC.GGGGGGCGGGaa < 2:3513984/93‑1 (MQ=255)
ccccgtcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGG.AAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACt > 2:625351/7‑101 (MQ=255)
ccccgtcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGG.AAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACt < 1:4849002/95‑1 (MQ=255)
cccgtcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGG.AAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACtt > 2:5414617/6‑101 (MQ=255)
gtcgcTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGG.AAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATGCC.GGGGGGGGGGAACTTccc > 1:5607257/5‑101 (MQ=255)
ggcccGGCGGGTCTGCCCCCGGGATTTTTCCGCCAGGGGG.AAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTccc < 2:7132047/99‑1 (MQ=21)
tcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGG.AAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCg > 1:7096718/2‑101 (MQ=255)
cTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGG.AAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGGCCTTCCCgaa.g > 2:921575/1‑101 (MQ=255)
tcGGGACTCCCCCCGGGATATTTCCGCCAAGGGG.AAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCgaa.gga < 2:1529953/100‑3 (MQ=255)
gCGGGACTCCCCCCGGGATATTTCCGCCAAGGGG.AAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCgaa.gga < 2:5872812/101‑3 (MQ=255)
cGGGACTCCCCCCGGGATATTTCCGCCAAGGGG.AAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC..GGGGGGGGGAACTTCCCGaa.g.gaaa < 1:2332965/101‑2 (MQ=255)
ggACTCCCCCCGGGATTTTTCCGCCAAGGGG.AAATGAACCCGGGGCGCGGCTTTCCCCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGaa.g.gaaag < 2:4982602/101‑3 (MQ=255)
ggACTCCCCCCGGGATATTTCCGCCAAGGGG.AAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGaa.g.gaaag > 2:2059337/1‑99 (MQ=255)
ggACTCCCCCCGGGATATTTCCGCCAAGGGG.AAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGaa.g.gaaag < 1:2750624/101‑3 (MQ=255)
aCTCCCCCCGGGATATTTCCGCCAAGGGG.AAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAagag > 1:1001456/1‑101 (MQ=255)
aCTCCCCCCGGGATATTTCCGCCAAGGGG.AAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAagag > 2:3836555/1‑101 (MQ=255)
cTCCCCCCGGGATATTTCCGCCAAGGGG.AAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAgg > 1:4752476/1‑101 (MQ=255)
tCCCCCCGGGATATTTCCGCCAAGGGG.AAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAggg < 1:2464632/101‑1 (MQ=255)
ccccccGGGATATTTCCGCCAAGGGG.AAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAgggg < 1:4387658/101‑1 (MQ=255)
ccGGGATATTTCCGGCAGGGGG.AAATGAGCCCGGGGCGCGGCTTTCCCCTGGGGCCAAATGTCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCa < 2:2566067/101‑1 (MQ=255)
cGGGATATTTCCGCGAAGGGG.AAATGAACCCGGGGCGCGGCTTTCGCCTTGGGCCAAATATCCC..GGGTGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAgg < 1:3695760/101‑1 (MQ=255)
cGGGATATTTCCGCCAAGGGG.AAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAg < 1:6473825/101‑1 (MQ=255)
cGGGATATTTCCGCCAAGGGG.AAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAg > 1:4649740/1‑101 (MQ=255)
gggATATTTCCGCCAAGGGG.AAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAgg < 2:1211318/101‑1 (MQ=255)
gATATTTCCGCCAAGGGG.AAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC..GGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGcc > 1:593001/1‑101 (MQ=255)
atatTTCCGCCAAGGGG.AAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC..GGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGccc > 2:2632576/1‑101 (MQ=255)
tattCCCCCAAGGGGAAAATGACCCGGGGCCCCGGCTTCCCCCTGGGCCAAAATACCCG.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGccc < 1:5578949/99‑1 (MQ=255)
atTTCCGCCAAGGGG.AAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGcccc > 1:4452225/1‑101 (MQ=255)
atTTCCGCCAAGGGG.AAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGcccc < 1:160890/101‑1 (MQ=255)
atTTCCGCCAAGGGG.AAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGcccc < 1:3093937/101‑1 (MQ=255)
tttCCGGCAAGGGG.AAATGGCCCCGGGGCGCCGCTTTCACCTTGGGCCAAATAGCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGccccc < 1:2474225/101‑1 (MQ=255)
tttCCGCCAAGGGG.AAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCACGAAGG.AAAGAGGGGGGCAGGGccccc < 2:3723431/101‑1 (MQ=255)
ttCCGCCAAGGGG.AAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCt < 1:4261038/101‑1 (MQ=255)
tCCGCCAAGGGG.AAATGAACCCGGGGCGCGGCTTTCCCTTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCtt < 2:3113390/101‑1 (MQ=39)
tCCGCCAAGGGG.AAATAAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCtt < 1:3237491/101‑1 (MQ=255)
ccaccAGGGGG.AAATGGACCCGGGGCCCGGCTTCCACCTGGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCttt < 1:5420659/98‑1 (MQ=37)
ccGCCAAGGGG.AAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCttt < 2:1754735/101‑1 (MQ=255)
ccGCCAAGGGG.AAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCttt < 1:3877579/101‑1 (MQ=255)
cGCCAAGGGG.AAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCTTTc < 1:1028020/101‑1 (MQ=255)
gCCAAGGGG.AAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCTTTcc > 2:3238237/1‑101 (MQ=255)
ccAAGGGG.AAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCTTTccc > 1:1001045/1‑101 (MQ=255)
cAAGGGG.AAATGACCCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCTTTCCCg < 1:6541668/101‑1 (MQ=255)
cAAGGGG.AAATGAACCCGGGGCGCGGCTTTCCCCTTGGGCCAAATATCCCGGGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCTTTccc < 1:5997798/101‑1 (MQ=37)
cAAGGGG.AAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCTTTCCCg > 1:584385/1‑101 (MQ=255)
g.AAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCTTTCCCGATCggg > 1:848359/1‑101 (MQ=255)
aaaTGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCTTTCCCGATCgggg > 2:6540415/1‑101 (MQ=255)
aaaTGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCTTTCCCGATCgggc > 2:5798706/1‑100 (MQ=255)
aaTGAACCCGGGGCGCTGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGc > 1:2090423/1‑101 (MQ=255)
tgggcccgggggCGC.GCATTCCCCGTGGGCCAAATACCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCg < 1:283781/93‑1 (MQ=255)
aTGAACCCGGGGCGCGGCTTTCCCCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGcc < 2:4744846/101‑1 (MQ=255)
aTGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGcc > 2:4246823/1‑101 (MQ=255)
aTGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC..GGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCg < 2:592981/101‑1 (MQ=255)
gAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCgg > 1:1940914/1‑101 (MQ=255)
gAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAA.GAAAAGAGGGGGGCGGGCCCCCCTTTCCGGATGGGGGCGgg > 2:861373/1‑101 (MQ=37)
aaCCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGt > 1:694816/1‑101 (MQ=255)
aCCCGGGGCGCGGCTTTCCCCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTg < 1:1535578/101‑1 (MQ=255)
aCCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTg > 2:2117873/1‑101 (MQ=255)
aCCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGAGCCGGTg < 1:2058325/101‑1 (MQ=255)
cccGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGc < 1:1548474/101‑1 (MQ=255)
ccGGGGCGCGGCTTTCCCCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGcc < 2:1001421/101‑1 (MQ=255)
ccGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGcc < 2:2496611/101‑1 (MQ=255)
ggggCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCcgc > 1:5108814/1‑101 (MQ=255)
gcgcGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGGGCcgcgcg > 1:5375720/1‑101 (MQ=255)
cgcgGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCgg < 1:1318877/101‑1 (MQ=255)
gCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGGACTTCCCGAAGG.AAAGAGGGGGGGAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAgg > 2:1068238/1‑101 (MQ=39)
cTTTCCCCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAggg < 1:5078839/101‑1 (MQ=255)
cTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGACCTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGGGCCGGGCGGCGggg > 1:2235844/1‑101 (MQ=38)
cTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAggg < 2:5071169/101‑1 (MQ=255)
ttCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGGGCCGCGCGGCAGGGTc > 1:1695006/1‑101 (MQ=255)
tCACCTTGGGCCAAATATCCC.GGGGGGGGGGCACTTCCCGAAGG.AAAGCGGGGGGGAGGGCTCCGTTTCCCGACTGGGGCCGGCCCCGCGCGGCAGGGTCt > 2:5432891/1‑101 (MQ=255)
cACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCtt < 2:3615275/101‑1 (MQ=255)
cACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCtt < 1:701981/101‑1 (MQ=255)
cccTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTg < 2:6678646/100‑1 (MQ=255)
aCCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGCCTTg > 2:5305273/1‑101 (MQ=255)
ccTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTgg < 2:5477394/101‑1 (MQ=255)
ttGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGcc > 1:5297432/1‑101 (MQ=255)
ttGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGGGCCGCGCGGCAGGGCCTTGGcc > 1:1129665/1‑101 (MQ=39)
tGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGGCTTGGCCg > 1:2932509/1‑101 (MQ=255)
tGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGCCTTGGCCg > 1:771187/1‑101 (MQ=255)
gggCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCgg < 2:2252152/101‑1 (MQ=255)
ggCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCggg > 1:3037360/1‑100 (MQ=255)
gCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCTGGGTCTTGGTCGGTc < 1:6858235/101‑1 (MQ=39)
ccAAATGGCCC.GGGGGGGGAGCTCTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCGGTCa < 2:1129617/101‑1 (MQ=255)
ccAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCGGGCa > 1:2523455/1‑101 (MQ=255)
ccAAATATCCC..GGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCGGTCAg < 2:2405405/101‑1 (MQ=255)
cAAATATCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGCCTTGGCCGGTCAg > 2:4204730/1‑101 (MQ=255)
atatCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCGGGCAgcgg > 2:6414435/1‑98 (MQ=255)
atatCCC..GGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCGGTCAggcgg < 2:2970352/101‑1 (MQ=255)
tatCCC.GGTGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCGGTCAggcgg > 1:4532811/1‑101 (MQ=255)
tatCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCGGTCAggcgg > 2:6878645/1‑101 (MQ=255)
atCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCGGTCAggcggc > 2:5977914/1‑101 (MQ=255)
atCCC.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGGCTTGGCCGGGCAggcggg > 1:5059676/1‑100 (MQ=255)
atCCC.GGGGGGGGGG.ACTTTCCGAAGG.AAAAAGGGGGGGAGGGGCCCCTTTCCCCATCGGGGGCGGGGCCCCGGGGCCGGGGCTTGGCCCGGCCCgcggcg > 2:7095273/1‑101 (MQ=255)
ccc.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCGGTCAGGCGgcgc > 2:1976784/1‑101 (MQ=255)
c.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCGGTCAGGCGgcgcgg > 1:4128692/1‑100 (MQ=255)
c.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCGGTCAGGCGgcgcgc > 1:266102/1‑101 (MQ=255)
c.GGGGGGGGGGAACTTCCCGAAGG.AAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCGGTCAGGCGgcgcgc > 1:5651278/1‑101 (MQ=255)
|
GCTGTGGTACCCCTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGG.AAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAA.G.AAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCGGTCAGGCGGCGCGC > NC_014034/1255895‑1256084
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 24 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|