| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,397,698 | Δ1 bp | 1.2% | intergenic (+2/+1896) | RCAP_rcc01307 → / ← RCAP_rcc01309 | hypothetical protein/IS66 family transposase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,397,698 | 0 | A→. | 1.2% | 2.4 ‑2.0 ‑0.0 | 338 | intergenic (+2/+1896) | RCAP_rcc01307/RCAP_rcc01309 | hypothetical protein/IS66 family transposase |
| Reads supporting (aligned to +/- strand): new base (0/4): ref base (145/189): total (145/193) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.38e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.42e-01 | ||||||||||
Only 100 of 354 total aligned reads displayed.
CATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGCGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACG > NC_014034/1397598‑1397798
|
cATCCGCGGATCGGCGTGCCCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACa < 1:3576427/101‑1 (MQ=255)
ccGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGt < 1:3206883/101‑1 (MQ=255)
ccGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGt < 2:1353467/101‑1 (MQ=255)
cgcgGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTc < 1:7093897/101‑1 (MQ=255)
gATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.c < 1:2869691/101‑1 (MQ=255)
accGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.cc < 1:6022474/99‑1 (MQ=255)
tCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.ccc > 2:1056816/1‑101 (MQ=255)
cccgCGTGCCCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.ccc < 2:1756956/98‑1 (MQ=255)
cGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.cccc > 2:1310082/1‑101 (MQ=255)
ggCGTGCCCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.ccccc < 1:874756/101‑1 (MQ=255)
ggCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.ccccc > 2:4821437/1‑101 (MQ=255)
ggCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.ccccc > 2:1115613/1‑101 (MQ=255)
ggCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.ccccc > 2:4268260/1‑101 (MQ=255)
gCGTGCCCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.cccccc < 2:5276835/101‑1 (MQ=255)
gCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.cccccc < 1:187874/101‑1 (MQ=255)
cgggACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCcg < 2:3188424/98‑1 (MQ=255)
tGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCcgcg > 1:4436590/1‑101 (MQ=255)
tgaaacccgtccATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCgggg > 2:874700/6‑100 (MQ=255)
cccgccccgcCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCgggg < 2:2216260/101‑2 (MQ=255)
cgccccgcccATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGgggc < 1:378533/101‑1 (MQ=255)
gccccgcccATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGggcg > 1:850225/1‑101 (MQ=255)
cccgcccATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTg < 2:3429449/101‑1 (MQ=255)
aTCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGaa > 1:6559601/1‑101 (MQ=255)
aTCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGaa > 1:5900632/1‑101 (MQ=255)
tCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGaaa < 1:5342146/101‑1 (MQ=255)
ggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACt > 1:6785540/1‑101 (MQ=255)
ggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACt < 1:1298730/101‑1 (MQ=255)
ggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGAGC.CGGGCTTGATCTGTTC.CGGTAACAGGTCGCT.CCCCCCTCGGGGGCGTGGGTCGAAGCt > 2:6249014/1‑101 (MQ=25)
tCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTg < 1:2397348/101‑1 (MQ=255)
gCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTc < 2:1226848/101‑1 (MQ=255)
gCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTc > 1:4557253/1‑101 (MQ=255)
gCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTc < 2:4422404/101‑1 (MQ=255)
ccccccGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGa > 1:2644916/1‑101 (MQ=255)
ccccccGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGa < 1:418918/101‑1 (MQ=255)
ccccGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGAcg > 1:5493098/1‑101 (MQ=255)
ccccGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGAcg > 1:1538653/1‑101 (MQ=255)
ccGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGAcgcg > 1:1258545/1‑101 (MQ=255)
ccGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGAcgcg < 1:299066/101‑1 (MQ=255)
ccGCGGGGGCGTGGATCGAAACGGCGTAGATCTCGGTCTGGGTGCGCTCGCGGTTGC..GTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACATGGCtatggcg < 2:661998/101‑7 (MQ=0)
cgGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCtc < 2:4919981/101‑1 (MQ=255)
gggggCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCtca > 2:2881933/1‑101 (MQ=255)
gggggCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCtca > 1:289727/1‑101 (MQ=255)
gggggCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCtca > 2:5216823/1‑101 (MQ=255)
ggggCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCtcat > 2:732954/1‑101 (MQ=255)
ggtcGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCtcatc < 2:4665803/98‑1 (MQ=255)
gggCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCtcatc < 1:2485641/101‑1 (MQ=255)
gggCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCtcatc < 1:4223578/101‑1 (MQ=255)
ggCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCtcatca < 2:5041500/101‑1 (MQ=255)
ggCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCtcatca < 2:4710767/101‑1 (MQ=255)
gCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAg > 2:5854542/1‑101 (MQ=255)
cGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGc < 1:6207648/101‑1 (MQ=255)
gTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCa < 1:5846033/101‑1 (MQ=255)
gATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGt > 1:2146824/1‑101 (MQ=255)
tCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCa < 1:3081060/101‑1 (MQ=255)
tCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCa < 2:4573672/101‑1 (MQ=255)
cGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCaa > 1:1695314/1‑101 (MQ=255)
cGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCaa < 2:6749551/101‑1 (MQ=255)
gAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAg < 2:4047924/101‑1 (MQ=255)
aaaCTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGa < 2:1716428/101‑1 (MQ=255)
aaCTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGCTAAGAt > 2:5177595/1‑101 (MQ=255)
cTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTc < 2:5327353/101‑1 (MQ=255)
tACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCa > 1:405932/1‑101 (MQ=255)
aCAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAg > 1:797737/1‑101 (MQ=255)
cAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGt > 1:7033687/1‑101 (MQ=255)
cAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGt > 1:6624960/1‑101 (MQ=255)
agagTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCTCCCCCCCGCGGGGGGGTGGATCGAAACTTGTCTGCCGCGCCCATCAGCCCGTCACAATTCAgc > 2:6008922/1‑100 (MQ=255)
gagTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCg > 1:6396200/1‑101 (MQ=255)
ttC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTc > 1:496518/1‑101 (MQ=255)
tC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTcc < 1:4821680/101‑1 (MQ=255)
tC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTcc < 1:2243657/101‑1 (MQ=255)
cGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTcccc > 1:370968/1‑101 (MQ=255)
ggTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTccccc < 2:3782687/101‑1 (MQ=255)
ggTCTTGTTCCGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTccccc < 1:6301064/101‑1 (MQ=255)
gTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTcccccc > 1:3499659/1‑101 (MQ=255)
gTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTcccccc < 2:164906/101‑1 (MQ=255)
tCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCcg < 2:3632283/101‑1 (MQ=255)
cTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCcgc < 1:1743842/101‑1 (MQ=255)
cTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCcgc > 2:3567419/1‑101 (MQ=255)
cTTGTTCTGTTC.AGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCACCACGTCAAGATTCAGTCGCTGCCCCcgg > 1:1053707/1‑100 (MQ=37)
gttctgttc.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCggg > 2:3098710/1‑101 (MQ=255)
ttctgttc.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCgggg > 1:1012654/1‑101 (MQ=255)
ctgttc.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGc < 1:6501046/101‑1 (MQ=255)
ctgttc.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGc < 2:2918876/101‑1 (MQ=255)
tgttc.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCg > 1:1413853/1‑101 (MQ=255)
tgttc.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCg > 1:6717668/1‑101 (MQ=255)
gttc.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGt < 2:5528346/101‑1 (MQ=255)
ttc.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGTg < 1:7001299/101‑1 (MQ=255)
ttc.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGTg < 1:5764544/101‑1 (MQ=255)
c.cGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGTGGa > 1:3329060/1‑101 (MQ=255)
cGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGTGGCGTGGAt < 2:2043843/101‑1 (MQ=255)
cGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGTGGAt < 1:561279/101‑1 (MQ=255)
ggTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGTGGATc < 1:2757031/101‑1 (MQ=255)
ggTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGTGGATc < 1:5217088/101‑1 (MQ=255)
ggTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGTGGATc < 2:2644820/101‑1 (MQ=255)
gTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGTGGATCg < 1:3937793/101‑1 (MQ=255)
gTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGTGGATCg < 2:2568570/101‑1 (MQ=255)
aaCAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGTGGATCGaa > 2:1261468/1‑101 (MQ=255)
aCAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa < 2:706715/101‑1 (MQ=255)
cAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc > 1:3609527/1‑101 (MQ=255)
aGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAct < 2:6390125/101‑2 (MQ=255)
|
CATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGCGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACG > NC_014034/1397598‑1397798
Base quality scores:
ATCG
< 3 ≤
ATCG
< 24 ≤
ATCG
< 31 ≤
ATCG
< 35 ≤
ATCG
< 41 ≤
ATCG
|